© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0328700.1
GTAGCACTAGCTGCTAAATAATACTCTTATGAATGCAACAAACAACGCAGAGTACTACCGAAATGCAGATACAGGCATGCCCAGCCAGCATCTACCTCATCTCAAAAGAAAAAAGAAAAAAAACAAAGAAGAAAAAGAAGACAAAAGAAACCAAACAGGCTTCTAGTCAGTGTTGTTTTTCAGACTTCAGATATTGCTCCTTACGCATACTCCGTTACAATATTCCATTTGTCACCTATGACTCTTGGGTGGTTAGGATGCGCCTTCACGCATGATGCCACTTTGGTCACCACAGATAATATGATGTCGCCAAAGAACTCGATCTCCTTCAGCTTTGGTAGATTCTCCAGACCTGAAATCCCATACTTGGGTTCTCGCAGGAATGACAATGTCAGCCTCTCCAGATTAGTCACTGAACCCGCATCGAACTGCATCTTCTCTATCCTCTCCAGATTATCAATGATCAACAGCTTGAGCTTCACGAATTTACCGTGACAAAAAACTATGCAGTTGTCAGCATATGATTTGTGATAGAGCTTGAGGCAGAGCAGATTTGGCAGGTCCCCAAGAACTCCTATGGCATCAGCATGGAGTTCGGTGCGACGAAGAGCAAACCTGGATACGTTTCGAAGCGATGGTATCCATGGAGGTAGCCTTTCCAACTCACCGGCCAGGCTAAACTTGGTTATGAATAGAGGAGGCGACTCAACAAAGGCTAGATTATCCAGTGATAAGCTGTGCTCCTTCTCATCCAGAGTGTGGATGGAGAGAGAGCGAAGAGGGCCAGGCAACTTGCTCAGAGACTCAAGGAATGCGTTCCAGTTCTCTTCCACACCGCGCAAGAGAACATTGAGCTTTGTCAGATTTTGCAGCAGGCCAATTTCCCGCAGTACTGGCGATTTATCCTTGACTACTATATGGACAAGTGATTGCAGAGCCACCATGTTCTTGACCACCCCAGTCGCCACCTCCAAACCTGAAGATTGTCTCAAGAACTTCACACTGGCTGTCCTTGTAAGCTGTACCTTGTGCCCCGCAAACAAATGCTTGAGACAACTCAGGTTGCCTGCACTAGCTGGTAGCTTCTTGATAAGAGTTGCCCTAATGTCCAGCGTCTCTAGGTGTTTCAGATTCCCTAGAAGATGAGGTAATTTGGACACGTTGGTATTTCTGAGGCTTAGGTACTTCAGCTGGAAAAACCTGCACATACAATGCAAAGTTTCGTTACTCAAGCAGCTGCAGCCTTGCAAGTCAAGTACTCTTAATAACCGTAGCTGCGGAAAGAAGAATGGGACTTCCTCAACAGAAGCAGACATCGTGAAGGAGCGAGCATGAGATACATTGGCACTTGTTTTTTGAGACGAATTGTAACTGCTGTGGATGGAGAGGCGACGGATTTTGTCATGGGAAGCCAATGTACTCCCATTGTCACATAAGAATGATGCAAAGTTCTCCTCAATTGACCTGGAGACAATGACATCTAACATCAAATCATGAACTCTGCAGCTCCTCACCTTGCCAGTCCAATCAGTCCTCACAGGCTGCACAATGCTTCTAGCCACAAACTCATCAAAGTAACTTTCTGCAAGCTGTTCCATGCTTTGTCCATGCCTTTGGCTGACGAAACCTTCAGCTATCCACCTTCTCACCAAGGGTCCCCTCTTGATCACATAATTTTCAGGGAAAATACTTAGATACAAGAAGCAGGCCTTCAGATGATAGGGTAGATCATTGTAGCTCAAGGTTAAGACTTGCTTCACTCCTTCCAGGGTAGGGTTGTTTTCAAGTTCAGATCCTAAGTTGTTACAAACCTTCTGCCACTCCTCCTTGGTCCTATTTGTCTTGCTTGCGAGAAGGCTGCCGATGTTCACTATTGCTAATGGCAAGCCTCCACATTTCTTCAAAACGGAATTTGACACTTCCTCAAACTCATCAGTTGGTGATTTATCATCTGCAAAACCAAATATCTTCTTGAAGAACAGTTCTCGTGATGTCGTTTCTGATAGTCGCTGGATATTGTAAATCCGATCTTGGGGACGAGAACAGCACGTGTTGGCCACATCTGCATTCCGGGTGGTTACTATTATCCTGCTACCCTTTAAGTTGTCAGGCAATGCACATCTGATGCTCTCCCATGCCGATACAGTCCATATGTCATCAAGGATCACAATGTACCTTTTGTCTTGGAAATACCTCCTGAGATTCTTAGTCAGTGCTGCAACCTCCCACCTTTCCATTCCCTCCAGGTAATCATCTGTAATAAGGCCATGCTTGCATCCTGCTATTGCCATCGCCTTGTGTGGCTCCTGGATTAGCTCCCTTACCATGTGCTGAAAAAGTGCCCTGATGTTGAACGTCTGTGAAATGATGAACAATGGACAGCACTGAAAATCAGCACTCTTCACCACAGGGCTTCCACACACCATCCTTGCCAGCGTCGTCTTCCCAAGGCCACCAAACCCGACAATAGCAAGCACACGAAGCCGAAGGTCCTCTTCCATCAGCCAGCTGACGAGCTCATTCCTAGGCTCATCGATGCCAACCAGCTGAGCCTCCTCCGCGAAGAGAGCATGCAACTGTGGATCGATATGGAGAGAGGCATGCCTGGTGAGTCTTGGATGTGCTTCTTCATGTGTGGCCTTTGCTAGCTCCACCCCGTACCTTGAACGCCGGTCACCGACATCCTGAGCACGGGCCTTCAGTTCTTGTAGCTGGAGAGCAATTCGGTGACGACAGGCTAGCTTGCGAAGCATAGATATGAGCCCACCAAAAAATCCCATTTCTGATGACTCCCCTAGGTTATGGATGAACTCATCAATACAATCCTCAGAGTCGTAGGCTATCTCCCTCACCTGCTTCATCCAGATCCTAACTTGGTCGTCATGAATCTGTGATATGGTCAGATTGCGTAGGAATGCATTCATGCACTCGAGCTCATCCTTGATGTACTGTATCTCACCATGGACACCCTGCACCAGCCAAGTATCCTCAGTTAGAAGGCAGCCAAGCTTGCACAGCAGGCTCCTGACTGCACCCTCCGTCAAACTGAAGACAGCACCCTCCATATCTTACTATGGAGCATGGAAATGGAAACACTGCTGCTGTTGAAGTTAGGATGCTCAGGTTATATTTGTAAGACATTTGGTTAGCTAATGGTGGAAGAATAAGAACATTCCAGAATTCAGACCATGGTTTTCCTGGTCAAGGAGACATGCAATGACAAGGAGACCTGCGGTTCGCCGCTGATGGCAAACAGAACCCTGAAACATGCTGACAAGGCAACTTGACTTCATGTCTTACAAGCCTGATAAGCAAATAATAGTATTCCTGTGGTGCATAAGAATATCATAAAAAGTTACAACTCATAGAAAAAGTCAATCAGTACGGAAAACTCATTGCTGTATGTATATGTAAGAGGCCAAAGGCAGCTTAAAAATTGGTAAAAGATCCAGTAATACTTAGAGAAGGTATAAAAGCAGTGGGGAAGAGTATGAACAAGTGATACCCTAAGGTTTGTTACATTCATAGCTGGATGAAAGGGTGATCCAAACAAGTACCCAGACAAGGACAAGCAGCACTGAAAAGAGGACAGAAAACAGCTAGGTAACTCTGACATTTTGACAACACAACTCATACGTGAAATGGAAAGAAGGCGGTATAGGACAACAGTCGTATTTTTGTGATGAATAGCTTGGTAAGATTGGTAAAGTATTTCGCCCGCCTTCTTACATCTGACCTATGAGATTAGAGTGCTACTTGTTTTAACAATGTGAACATTGTACAACACCATATATAAAGCAGAGTGAGAAAACTATGGTAGCAATAAGCAGATGAACACTAACATAATCACAGATAGGACGTGGCGACAGCAAAGCAAGGTTTAGTTAATAAAGATGAAATGCAAGTCAAAGTATTGAAGCATATTATATATAAATAATCAAAACTGTTAGCTAGTGTGACACAATGAACTGTAAAGGCATATATGCAAGTGAAGCGAAGTTAACATATAAGAGAATAGTGCAGGAAGGCAACAAGCTACTCGAGGTGGTTCCATATACTTTACAGCTTAATATGCACCGATCGCAATTGCACAAATAAGATAACAATGGTTAAAGCATTGCGTGTTCCCCTTGTAATTTTGTATAATAACCTAGTACTAGTCACCTTGAAAGAAATGGCGATGTCGACATAAATGCAGAAAGGCAATCAAGCAACCATTGGAAAAACAGGCACAGTTACCAGCATCATCTTGACTGTAGTGTTTGACTCTCTTCTTTTTCCCCTTAAAGATTTGCATAAAAGATGAAACCGAGCCACAGCATATCCAGTCCTTGGATTGTGAAGCACTTCAGCGGGGGCCGAGTCGAGCAAGACCTAGGAGAGCTTGGTTGTTACACCTGCGACATCTCTGATCTCTCCCTTGCGAAACATTCAGGGCCAGCTGCTCGCCGCCGCTACCTAGTCAGGCCCTTCTCGTAGACTAGCTGGGTGACGCATTTCATCGAACACATGAAGCACAGAGCCGCCCACCCGCGCGCGCTCTTCGATTAGCCACCACCACGATCCGTGCTTCACCCGGCTCCCTTGAATCTTCTGCGCATGCGCATGCGCATCCGGCCGGAATCTCTACCCGGCACGTCCTCCGCCGCCGCCATCGCCGGCGCGGAGGGCTGCGGCTGCGGCTCTCTCTCTCTCTCTCTCTCTTTTCCGAAAGAGAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0328700.1 | 6 | 2974109 | T | C |
| Osa06LNT0328700.1 | 6 | 2975947 | G | A |
| Osa06LNT0328700.1 | 6 | 2975966 | G | A |
| Osa06LNT0328700.1 | 6 | 2976222 | A | G |
| Osa06LNT0328700.1 | 6 | 2976856 | T | G |
| Osa06LNT0328700.1 | 6 | 2977134 | T | C |
| Osa06LNT0328700.1 | 6 | 2977896 | T | C |
| Osa06LNT0328700.1 | 6 | 2975917 | A | G |
| Osa06LNT0328700.1 | 6 | 2974286 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0328700.1 | osa-miR5530 | Cleavage | 4.5 | 13.944 | 1 | 21 |
| Osa06LNT0328700.1 | osa-miR5542 | Cleavage | 5.0 | 17.525 | 1 | 21 |
| Osa06LNT0328700.1 | osa-miR5544 | Translation | 4.5 | 13.96 | 1 | 22 |
| Osa06LNT0328700.1 | osa-miR5788 | Cleavage | 3.5 | 17.046 | 1 | 21 |
| Osa06LNT0328700.1 | osa-miR160d-3p | Cleavage | 5.0 | 19.744 | 1 | 21 |
| Osa06LNT0328700.1 | osa-miR169a | Cleavage | 4.5 | 16.496 | 1 | 21 |
| Osa06LNT0328700.1 | osa-miR167e-3p | Cleavage | 4.0 | 22.793 | 1 | 21 |
| Osa06LNT0328700.1 | osa-miR167i-3p | Cleavage | 4.0 | 22.793 | 1 | 21 |
| Osa06LNT0328700.1 | osa-miR169b | Cleavage | 4.5 | 16.496 | 1 | 21 |
| Osa06LNT0328700.1 | osa-miR169c | Cleavage | 4.5 | 16.496 | 1 | 21 |
| Osa06LNT0328700.1 | osa-miR169d | Cleavage | 2.5 | 16.496 | 1 | 21 |
| Osa06LNT0328700.1 | osa-miR169e | Cleavage | 3.5 | 16.496 | 1 | 21 |
| Osa06LNT0328700.1 | osa-miR169f.1 | Cleavage | 3.5 | 16.496 | 1 | 21 |
| Osa06LNT0328700.1 | osa-miR169g | Cleavage | 3.5 | 16.496 | 1 | 21 |
| Osa06LNT0328700.1 | osa-miR169h | Cleavage | 3.5 | 16.496 | 1 | 21 |
| Osa06LNT0328700.1 | osa-miR169i-5p.1 | Cleavage | 3.5 | 16.496 | 1 | 21 |
| Osa06LNT0328700.1 | osa-miR169j | Cleavage | 3.5 | 16.496 | 1 | 21 |
| Osa06LNT0328700.1 | osa-miR169k | Cleavage | 3.5 | 16.496 | 1 | 21 |
| Osa06LNT0328700.1 | osa-miR169l | Cleavage | 3.5 | 16.496 | 1 | 21 |
| Osa06LNT0328700.1 | osa-miR169m | Cleavage | 3.5 | 16.496 | 1 | 21 |
| Osa06LNT0328700.1 | osa-miR169n | Translation | 4.5 | 16.496 | 1 | 21 |
| Osa06LNT0328700.1 | osa-miR169o | Translation | 4.5 | 16.496 | 1 | 21 |
| Osa06LNT0328700.1 | osa-miR169p | Translation | 5.0 | 16.496 | 1 | 22 |
| Osa06LNT0328700.1 | osa-miR439a | Cleavage | 5.0 | 18.91 | 1 | 21 |
| Osa06LNT0328700.1 | osa-miR439b | Cleavage | 5.0 | 18.91 | 1 | 21 |
| Osa06LNT0328700.1 | osa-miR439c | Cleavage | 5.0 | 18.91 | 1 | 21 |
| Osa06LNT0328700.1 | osa-miR439d | Cleavage | 5.0 | 18.91 | 1 | 21 |
| Osa06LNT0328700.1 | osa-miR439e | Cleavage | 5.0 | 18.91 | 1 | 21 |
| Osa06LNT0328700.1 | osa-miR439f | Cleavage | 5.0 | 18.91 | 1 | 21 |
| Osa06LNT0328700.1 | osa-miR439g | Cleavage | 5.0 | 18.91 | 1 | 21 |
| Osa06LNT0328700.1 | osa-miR439h | Cleavage | 5.0 | 18.91 | 1 | 21 |
| Osa06LNT0328700.1 | osa-miR439i | Cleavage | 5.0 | 18.91 | 1 | 21 |
| Osa06LNT0328700.1 | osa-miR529b | Translation | 4.5 | 21.36 | 1 | 21 |
| Osa06LNT0328700.1 | osa-miR169r-5p | Cleavage | 3.5 | 16.496 | 1 | 21 |
| Osa06LNT0328700.1 | osa-miR444d.3 | Cleavage | 5.0 | 19.544 | 1 | 21 |
| Osa06LNT0328700.1 | osa-miR1853-3p | Cleavage | 3.5 | 16.354 | 1 | 22 |
| Osa06LNT0328700.1 | osa-miR2864.2 | Translation | 4.5 | 17.266 | 1 | 21 |
| Osa06LNT0328700.1 | osa-miR1863c | Cleavage | 5.0 | 12.451 | 1 | 24 |
| Osa06LNT0328700.1 | osa-miR2879 | Translation | 5.0 | 15.594 | 1 | 24 |
| Osa06LNT0328700.1 | osa-miR1863b.2 | Cleavage | 4.5 | 12.384 | 1 | 23 |
| Osa06LNT0328700.1 | osa-miR5161 | Cleavage | 2.5 | 20.911 | 1 | 20 |
| Osa06LNT0328700.1 | osa-miR5501 | Cleavage | 5.0 | 10.919 | 1 | 21 |
| Osa06LNT0328700.1 | osa-miR5529 | Cleavage | 5.0 | 21.379 | 1 | 21 |
| Osa06LNT0328700.1 | osa-miR1850.1 | Cleavage | 3.0 | 10.327 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0328700.1 | 6 | Lhd1(t) | Physiological trait | Flowering | nan | nan |
| Osa06LNT0328700.1 | 6 | En-Se1 | Physiological trait | Flowering | nan | nan |
| Osa06LNT0328700.1 | 6 | alk6-1 | Physiological trait | Eating quality | RM190 | RM253 |
| Osa06LNT0328700.1 | 6 | hr6 | Physiological trait | Eating quality | RM190 | RM253 |
| Osa06LNT0328700.1 | 6 | d4 | Morphological trait | Dwarf | nan | nan |
| Osa06LNT0328700.1 | 6 | nan | Resistance or Tolerance | Drought tolerance | RM170 | RM204 |
| Osa06LNT0328700.1 | 6 | nan | Morphological trait | Shoot/Seedling | OSR19 | RM225 |
| Osa06LNT0328700.1 | 6 | Qbph6 | Resistance or Tolerance | Insect resistance | RM510 | RM314 |
| Osa06LNT0328700.1 | 6 | AsTol | Resistance or Tolerance | Other soil stress tolerance | RZ516 | RG213 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)