© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0328900.1
GGGGCTGAGGAGACACCATTACAAAATATACACACACTTTGATTTACTGTGGCTATGGAAAAACAGATAAGATACCTTCAATCCATTTATGAGTGCATAATATGATTTAGTAGATATGGAAAAATAGATCACATATATTGAATACTTTTTTCTCTAAGCAGTTTGCAGAATTTCCAGTTGCACAGTACTGATTGTACTAGCATGATTTACAAACTTGATGATCATCTCATATAACCTTTCGAAAATCTTGACTATTTCAGCAAGGAAATGTTTATGAATTTACTCTGTTAAGCATTTGCAGAACACCCATGGACAGAAGCTGCACGCCTGCACCAGCACCACATATTGCTCAAATTTCGGCTAATGACAGATGGCGAAAATGTGCATTTTTGTGGCACTATCATCTCATCAAACTCCAACATACCAACTCTTCTATGAGCATGAATACAGATTTCTGCCTCTGTTAACTCTTCAGAAACTGAAAGCATGTGAAAATTCACCTAAACATTTCCACTCGATGCGTATGACCAGTACTCCTTGACGAGCTCTCGGAAAAGAGAACCTTCTGTTTCCATGAGCTTCGTAGGTTTGTCATACTCCACCACTTTACCATCGCTCATTGCAAGGACCATTGTGCAGTCCATAACTGTTGGTATACGGTGTGCAACAGTAATAACAGTGCAATCTTTGAACTCTGTTCTGATTGTTTTCTGAAGGATAGCATCAGTTGCATTGTCTATAGAGGCTGTCGCCTCATCAAGAACTAAGATACGGCATCGTCTCAAAAGTGCTCGTCCTAAACAGAAGAGCTGCCTTTGACCCATGCTCCAATTCGACCCATCTTCCACAACAAGTGAATCCAATCCCTGTTCCTTCTCCTGGACAGTCTCAAGAAGTTGACATTTGTCAAGAACCTCCCATATCTGTTGATCTGAGAATTGCCCAAGGGGGTCTAGATTGTATCTTAAAGTACCCTGGAAAAGTGTTGGATCTTGTGGAATGATGCCCAACCGTGATCGCAGGTCATGTAAGCCTATTGTGGTGATGTCCACAGAATCTATGATTATTTTCCCTCCAGCAGGTTCAACAAGACGAAACAAACCACCAATCAAAGTTGTCTTGCCACTTCCTGTCCGACCAACTATACCAATCTTATGTCCACCTTCAAATGTGCAAGTAATTCCATGCAGTACAAGGGGAGCATCTTGCCTGTACTTAATCTTCAAATCTCTAAGCTCCACCTTGCCAACTTGGGGCCAATCTGGTGCTGGCCGATTTTCTTTGATAACTTCTGCTGCTTCACTTGTAATGTCCATGTACTGGTTAACCCTTTCCACAGAAATGATTTGATTCGCAAGGTTGCATTGGTTTTGAATAGAGAAAACTAAAGACATGTTCAGGGATAGACCATAGGATAATGCCATTCCTACAAAACCAGGGCTAAAAGTTCCTGGAGGAAGAATCACCATGACAAGAGCAGAAAAGGAAAGAACTGCAGCACTCATTAGTTCCAGGCGTTGAATCAACCATTCAGTTGCAGCAAAATTGTAGAAGCATGGGCCAGCATTCTTGTCCACAAGCTCCAAATTTTTAGCAAAGAAACGATCTTCTTCCTCAAAGGCCCTTATTGTTATGGCCCCTGAAATCGATTCACCTAAGTGATTAGCTAGAGAAGATTTGGTAGTACCATTGATCCGCATCAATTCCTTAGCCGAAGCTAAATAGTACCTCTGCAACCTGATTACCAAAACTATCATTGGCACCGAAATAAACAAAACTTGCCATGTAATAACAGCCAATACCCCCAGATTGCTGTATGCATTTAAGCTGGCGCTAATGCTAAACATGAAGAAGAATGGAACGTCAAGGTCAACAATACTCAGATCTGAAGAAACCCGGCTCAATACCCTTCCTAGAGGAGTAGAATCAAAAAATGACATAGGTGCACGGAACAGTGAGTTAAGTAGCTGGGAAAATAAGGATCTTGAAGTCTGCATCCCAAGGACTACGATGGATAAAGACCTAGATAGCAAGAAGAACAATGTGCAAACTCCGATAGCAATATACACGACTATTAACTTCAGTGTACTAACACTAGGATTTTGGACATTAGCAGCCATCCATGAATTTTGTGATATTTGCCCACTTATGAAAATTATGTGGGAAATAACACAGATAGAGAGATATAAAAAGCCTTTGTTCTGGCGCAGGTACAGGATATAAGGCTTAAGACCTGTATCCCCTATTTCTCTCTCCTCTTTCTTTATCAGCTGATCTGCCGGCGATGGCTTCACAGATTCTCTATATCTGCTGCCATGAATATCATCTGTCTCCTCCATTGATATTTCCTTTTCTCTATGGAGGGGCATATTGTTAAGATCTGAAATTCCAATTGTATCTTTGTGGGCATTTACTAGGTCCTGAAATTCCTGGCAGTATTCCAATAGATCTTGATAAGGTGCTGACCGAATAATCTTTCCATCTGACATTAACAGAATAGAATCAAATACGGGTAGGAAATCCACTTGGTGGGTCACTAGAAGAACAGTCTTGTCTGACAGAGCTCCCATGACATATTCATTAAACAGACTTGATGCTGTATGGGCATCAACAGCACTGAAAGGATCATCAAGAAGATAGATGTCTGCATTTTGGTATAGTGCACGAGCAAGCTGAACACGTTGCTTCTGACCACCACTAAGATTTACTCCTCTCTCCCCAATTTGAGTAGAGTCTCCATGTGGCAACATTGCAAGGTCCTTTTCCAAAGAGCACTTCTCAAGTGTTTCTTTGTATCTTTGCTCATCCATCAAAGATCCAAAGAGAATATTTTCTTGCACAGTTCCTGTTTGGATCCATGCATTCTGAGAAACATATGCTATTTTCCCACAAACTTGAATTGTGCCTTCGGTCTTTGGGACCTCTCCAAGTACTGAAGCTAAAAGTGTTGATTTTCCTGATCCTACCTCGCCACAGATTGCAACTTTCTCCCCAGATTTGACCACTAAATTTATATTCCTCAGAGTATGTTTCGACGGGTTCTCATCCCACGAGAAGCTGCAGGAGTTTAGCGCAATGGGATACTCAGTACCCGCTATATATTTCTTCCTGCATTGCCCATTCAGCTCAGGAGCATCAAGAAATTTTACAACCCGGGTGAAAGCAACTTTAGCTTGAATCACAACTCCAATAACATCTGGTATCTGTCTGATTGGATCTTGCACGAGACGTAGAGTTGCCACAAAGGTGAATACATTGCTAGCATTCAGAGGAACTCTTAAAAGATAGCAAGTCAGAAATGTTGCTGCTGAAACCAGAACTGGTGATGACCAAAACAGGAAACTGTTGTATGCCTTCCTAAGGTTGAATGCTGACAGCCACTTGTACTCAACCTCCCTCAACCCCTCAATGACCTTCTTGAAATGATTTTCCCAAGCATATAATTTCAAGACCTTCATATGAACTAAAGACTCAGACATGGCCTTCAATCTCACATCTTGTGCTTCCATAAGTTTACTCTGGTACTTGTGTTGCAGTTTTGCCAGTGGAGCATTGCAGAGTACAGTAATAATGATGACAACCAACGACGATACCGTCGCAAGTCCAACTGCATTGTAAAGGATTGCCAGAGCAATGCAGAGCTGGACACTTGTTGTCCAAATTTGGTGGAACCAATACGGGAATTCCCCAATGCGGTAGGCATCGACAGTCACATAGTTCATTATTTCTCCAGAAGAGTGCTTCATTTTTGCTGAGTTTGATAGCTTCTGTTGCTTCTTGTAAATAGCTGCTGACAGGAATGACCTCACCTGGAGGCCTAACCTCCGAGTGCGGAAATACCACTGTCTCTGAGCCAAAGATTCACAGAATTTGCAAACGAACATTGTCACAGCTAGCACAATTCCTTCATATTTGAAGGTCCCTTCCCCCAGCGATACATTGATGAGTGCCTTGAGAAGCAATGGGCCTGAGGATAAGGTAACAACCTTGAGCAATGCAAAGAAGCCTGAGATCAGAATCCCACTCTTATGGCAAGAAACAATGGTCCAAAATACTGATGGTGTGGCATGTGACTGCAACTGCTTCTTTCTATTCATCATCTCCAAGAACATCAAGTACTGATTCTGCGCTCGATCAGTGGAGCCTAAAAGTGGCATGTCTTTCTCTTCGAGAGGCTTCGCGTAACCCATCTTCATCAAAGGGTTCAACCACCAAAATGACATCACACTGAAAAATCCAGCTTTAGCAAAAGGAGTTACATGACTCTCTGAATCAGCCGTCCCATGATCCCTCTCTGTATTCAGCGGCATGTATAAAGCATTTTCAGTTGTTTCATAACCCTCTTCATCACGGCTGTGCCGAATGGCATAAAGAAGAAGGATAAGGGCTCCAGGTAGCAAAAGAACATCTAAACAAGCTTTAATGGTGATCTCCTTCTCTCCAACCATGTAGACAACTGAACAGCAACAGATGAATGCTGCACATATGGTAAGCAAAAGCGACCAGAATCGAACAAATGTAGCTCCAAGAAATCGAGGTCTGATGCTAAAACTGAAACTAGTAAGGATCAAACTGAATCCTTGAGCCAAGATCACAAGCCACCAATGCGGCCGGTAAATGGAGGTTTCCTGATTGAAGCTAATCCCCACCATCCACAGTCCTAGGCCAAGATTAAGCAAACCCAAGCAGCCAGTGAACACTACAGCAGCCAACTGCAGCAGTGAATTGAATGCGACAAGCTGCCGCGCAGATGCTCTACTCTTTGGAATTTTCATGAGCAACTGATGTACAAGCGCAACAGTGAGCACTGCAACAATGGAAATCACCACCAGATGATTCACGCAAGTCGAAGAATCCAATGTTTCCTTCATAGCACATGAGACCACATCTTGCTCGGAGCAAATTGGGCTCCCACACAAGCTCATCGCCCAAGAACTTATGAGGGAACCCATCTGTCCAATCTCTGTTGCACCGTCCGTTGAATCAGACAGCTTAAACCTTCTTTTTCAGCTCTCCAAAGCACGACTCCCCAAAAACAGCTTCTTTTCTTTTCTTTTCTTTTTCTTTTTTTCCCCTCCTTCCTGCGCCAACCAAACACCTTCCCAATCGTGGCCCCCTTCTTCCTCGCCGCCGTCGCACTCGTGTGTTGAGGCGAGCGAACAGCGGAGACGACGAGACGACGCGCTGGGCGCGCGCGCGCGCGGGTGGTGTTTATTATAGGTGGCGCGCGTCGCGTCGCGTCGCGGCGCGGCGCGGCGAGGCGGGTGGCGCGCGCTG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0328900.1 | 6 | 3002402 | C | T |
| Osa06LNT0328900.1 | 6 | 3002649 | A | T |
| Osa06LNT0328900.1 | 6 | 3002901 | T | A |
| Osa06LNT0328900.1 | 6 | 3006946 | C | T |
| Osa06LNT0328900.1 | 6 | 3008030 | A | G |
| Osa06LNT0328900.1 | 6 | 3009645 | T | A |
| Osa06LNT0328900.1 | 6 | 3003003 | T | G |
| Osa06LNT0328900.1 | 6 | 3008621 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0328900.1 | osa-miR5807 | Translation | 5.0 | 12.55 | 1 | 24 |
| Osa06LNT0328900.1 | osa-miR5834 | Cleavage | 4.5 | 17.185 | 1 | 21 |
| Osa06LNT0328900.1 | osa-miR5516b | Translation | 4.0 | 17.163 | 1 | 21 |
| Osa06LNT0328900.1 | osa-miR5516b | Cleavage | 4.5 | 19.276 | 1 | 21 |
| Osa06LNT0328900.1 | osa-miR6249a | Translation | 4.5 | 18.431 | 1 | 21 |
| Osa06LNT0328900.1 | osa-miR6249b | Translation | 4.5 | 18.431 | 1 | 21 |
| Osa06LNT0328900.1 | osa-miR160c-3p | Cleavage | 4.5 | 17.653 | 1 | 21 |
| Osa06LNT0328900.1 | osa-miR395f | Cleavage | 4.5 | 10.837 | 1 | 21 |
| Osa06LNT0328900.1 | osa-miR399k | Cleavage | 5.0 | 16.286 | 1 | 21 |
| Osa06LNT0328900.1 | osa-miR159f | Cleavage | 5.0 | 14.982 | 1 | 21 |
| Osa06LNT0328900.1 | osa-miR166k-5p | Translation | 4.5 | 16.297 | 1 | 21 |
| Osa06LNT0328900.1 | osa-miR169i-5p.2 | Cleavage | 5.0 | 16.009 | 1 | 22 |
| Osa06LNT0328900.1 | osa-miR171c-5p | Cleavage | 4.5 | 20.256 | 1 | 21 |
| Osa06LNT0328900.1 | osa-miR390-3p | Translation | 5.0 | 16.496 | 1 | 20 |
| Osa06LNT0328900.1 | osa-miR1432-5p | Translation | 5.0 | 13.806 | 1 | 21 |
| Osa06LNT0328900.1 | osa-miR810b.2 | Translation | 4.5 | 15.601 | 1 | 21 |
| Osa06LNT0328900.1 | osa-miR1442 | Translation | 4.5 | 17.733 | 1 | 20 |
| Osa06LNT0328900.1 | osa-miR1865-5p | Cleavage | 5.0 | 15.659 | 1 | 24 |
| Osa06LNT0328900.1 | osa-miR1869 | Cleavage | 5.0 | 17.969 | 1 | 24 |
| Osa06LNT0328900.1 | osa-miR1862d | Cleavage | 4.5 | 11.424 | 1 | 24 |
| Osa06LNT0328900.1 | osa-miR1862e | Cleavage | 3.5 | 11.65 | 1 | 24 |
| Osa06LNT0328900.1 | osa-miR1862e | Cleavage | 4.5 | 12.464 | 1 | 24 |
| Osa06LNT0328900.1 | osa-miR1320-5p | Cleavage | 5.0 | 11.004 | 1 | 21 |
| Osa06LNT0328900.1 | osa-miR396f-3p | Cleavage | 5.0 | 13.963 | 1 | 24 |
| Osa06LNT0328900.1 | osa-miR2864.1 | Translation | 4.5 | 17.019 | 1 | 21 |
| Osa06LNT0328900.1 | osa-miR2872 | Translation | 4.5 | 23.654 | 1 | 21 |
| Osa06LNT0328900.1 | osa-miR2919 | Cleavage | 3.5 | 4.124 | 1 | 19 |
| Osa06LNT0328900.1 | osa-miR2919 | Cleavage | 4.5 | 2.514 | 1 | 19 |
| Osa06LNT0328900.1 | osa-miR2919 | Cleavage | 4.5 | 12.359 | 1 | 19 |
| Osa06LNT0328900.1 | osa-miR1862f | Translation | 5.0 | 11.424 | 1 | 20 |
| Osa06LNT0328900.1 | osa-miR1862f | Cleavage | 4.0 | 10.144 | 1 | 20 |
| Osa06LNT0328900.1 | osa-miR1862g | Translation | 5.0 | 11.424 | 1 | 20 |
| Osa06LNT0328900.1 | osa-miR1862g | Cleavage | 4.0 | 10.144 | 1 | 20 |
| Osa06LNT0328900.1 | osa-miR3981-3p | Translation | 4.5 | 24.306 | 1 | 21 |
| Osa06LNT0328900.1 | osa-miR5339 | Translation | 5.0 | 16.547 | 1 | 21 |
| Osa06LNT0328900.1 | osa-miR5505 | Cleavage | 4.0 | 11.23 | 1 | 22 |
| Osa06LNT0328900.1 | osa-miR5516a | Translation | 4.0 | 17.163 | 1 | 21 |
| Osa06LNT0328900.1 | osa-miR5516a | Cleavage | 4.5 | 19.276 | 1 | 21 |
| Osa06LNT0328900.1 | osa-miR5522 | Translation | 4.5 | 16.728 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0328900.1 | 6 | alk6-1 | Physiological trait | Eating quality | RM190 | RM253 |
| Osa06LNT0328900.1 | 6 | hr6 | Physiological trait | Eating quality | RM190 | RM253 |
| Osa06LNT0328900.1 | 6 | d4 | Morphological trait | Dwarf | nan | nan |
| Osa06LNT0328900.1 | 6 | nan | Resistance or Tolerance | Drought tolerance | RM170 | RM204 |
| Osa06LNT0328900.1 | 6 | nan | Morphological trait | Shoot/Seedling | OSR19 | RM225 |
| Osa06LNT0328900.1 | 6 | Qbph6 | Resistance or Tolerance | Insect resistance | RM510 | RM314 |
| Osa06LNT0328900.1 | 6 | AsTol | Resistance or Tolerance | Other soil stress tolerance | RZ516 | RG213 |
| Osa06LNT0328900.1 | 6 | Lhd1(t) | Physiological trait | Flowering | nan | nan |
| Osa06LNT0328900.1 | 6 | En-Se1 | Physiological trait | Flowering | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)