© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0329100.1
ACTGAATTCAGACTAACATATAGATTATGTTCTTGCAGCATTCATCAATCAAACCGGGATCATTCCTTTGTTCAGTTCAAAAGAGCATAAACAAACGCACTAAATTTAGCACACACACTTAAGGTAAAACCCGCATGTAAAAGAGAGCATTACGTCAAACACCACATCCAACATAGGAGATGTCCATTAATGTGATAAGCAATTCATTCATTGGTTGAGGTGATCCATGTAAGCTTGATACCCTATATGCAGGGAAGGGTCACAAATTGCATGATGGAGAAACTCTTGGTTAGCTTCACTAGCATGGCCACTGGGCCCTACATCTTGGCAAGATATATGAAGCATATTTTCTCCACTAGTTTCTTGTATCTTCCTTTTTAAGTCTTTATTAGCATCTTGAAGTTGTTGTTCCTTACGTTTGAGCTCAAATACTTGATCAAGCAACTGTTGATTCTTTGATGACCTGATATTCATGAGGGATATCTCGATCTGGTTCTCAAGTTGCTCGAGCTCCTTCAAGCTAAGTGGAACCAAGTCCTCGCCAAGAAGATTTCTCTGAGTTGTTTGTAGGAACTCAACTCTTGTCTTTAACTTTAAGTACTCTTGGTAATTGCTCTATATGAATGCCAAATTAGCAGCCAAATATTAATTGAAAGAAAATCATGATTACTATGTAAAAGTTGATGAGTTGGAATATGCCTGGCATAGAACTAATTAAATTGGACATGAGAAATTAATTAATTAATTAATAGACAAAACTTAAAATGGTAATGGCATATCATGAAGTATATACATACTGCATATTGCTAATTGTTGTGTTAGTTGACAACAGAACTTATTTGTTACTTCCTCCGTTTTATATTATAAGACTTTCTAACATTATTCACATTCATATAGATGTTAATGAATGTGGACAATGCTAAAAAGTCTTATAATATGAAACGGAGGGAGTAGATATGTAGCATGCATGCATGGATAATACTTGTTTCGTCCTCGATATATACATATATAGCTGCTGTTCAAAAGGGGAATATACCCTGCGCAGAATGTACTGTAAAAATGTAATTTAAAAGACAAGTCTGTTTAAAATATACATTAATTAACCTATCATGTCTAGCATATTATACATCTATCATGCACGAACATGAGAATTATGTAAAATTTTAAGATATCACATACGTTTTATTAAATATTATGTATGGCAGTGTACACATCGATATTTCCTTGTAAACAATAATTGTAGCCCCTATCACAACGTATACCAGATTGTGTTAATTACATAACTTATATCCAAAACAAGCCTGATTCTCCTTTATTAACAGCTAGCAGCAGTTGCTGCACAGATAGAGATGATTCATTAGATCTAAAAATATGCTTGGCCACATAGATCCTCATGTTTCAACTAATGACCAAATTAAGTTCAATTCTTTGAAAAAGTTTAAGGAACCATAGTTTATTACAGGTGAATTGCATATGCAGCAATCATATTCAGAATCAGATGGTTACTAGTTCAGTTTCCAGTGCAGCAGATGCTTCACATGAGTTAAGGTTGTAGTTGCAACTGCGGTATCGCTCCAGTGTCTTGTACATACAGGAGGAGGTGGAGAACTCGAAGAGGCGGCCGCGGGTGGAGAAGATGATGAGGGCGACCTCGGCGTCGCAGAGCACGGACAGCTCGTACGCCTTCTTCAGCAGCCCGTTCCTCCTCTTCGCGAACGTCACCTGCCGGCTTATCTTGTTCTCGATCCGCTTCAGCTCTACTTTCCCTCGCCCCATCGATCTCTCTCTAGCTCTCTCTCGGTCTCAAAATCTCTTCTTGATCTATCTCCTCTCTCTCCTTGCCTAGCTAGTTAGCTGCAGCCTGCAAGCTTCCCTCTCTCTCCCTCTCCCTTGCAGTCTTGCTCCGTTTGTT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0329100.1 | 6 | 3163219 | A | G |
| Osa06LNT0329100.1 | 6 | 3163796 | T | G |
| Osa06LNT0329100.1 | 6 | 3165024 | A | G |
| Osa06LNT0329100.1 | 6 | 3165506 | T | C |
| Osa06LNT0329100.1 | 6 | 3166267 | G | A |
| Osa06LNT0329100.1 | 6 | 3166483 | A | T |
| Osa06LNT0329100.1 | 6 | 3167403 | T | A |
| Osa06LNT0329100.1 | 6 | 3167422 | A | G |
| Osa06LNT0329100.1 | 6 | 3167452 | A | G |
| Osa06LNT0329100.1 | 6 | 3167603 | T | C |
| Osa06LNT0329100.1 | 6 | 3167721 | T | G |
| Osa06LNT0329100.1 | 6 | 3167784 | A | G |
| Osa06LNT0329100.1 | 6 | 3167801 | C | T |
| Osa06LNT0329100.1 | 6 | 3168046 | T | G |
| Osa06LNT0329100.1 | 6 | 3169181 | C | T |
| Osa06LNT0329100.1 | 6 | 3167431 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0329100.1 | osa-miR5793 | Cleavage | 4.5 | 19.824 | 1 | 21 |
| Osa06LNT0329100.1 | osa-miR5812 | Cleavage | 4.0 | 12.853 | 1 | 24 |
| Osa06LNT0329100.1 | osa-miR169f.2 | Cleavage | 4.0 | 13.579 | 1 | 21 |
| Osa06LNT0329100.1 | osa-miR535-5p | Cleavage | 5.0 | 7.677 | 1 | 21 |
| Osa06LNT0329100.1 | osa-miR1436 | Cleavage | 5.0 | 8.473 | 1 | 21 |
| Osa06LNT0329100.1 | osa-miR2101-3p | Translation | 4.5 | 21.241 | 1 | 22 |
| Osa06LNT0329100.1 | osa-miR2878-5p | Cleavage | 5.0 | 12.579 | 1 | 24 |
| Osa06LNT0329100.1 | osa-miR5149 | Translation | 5.0 | 20.314 | 1 | 22 |
| Osa06LNT0329100.1 | osa-miR5506 | Cleavage | 3.5 | 19.985 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0329100.1 | 6 | qGYD-6-1 | Morphological trait | Seed | RZ398 | RM204 |
| Osa06LNT0329100.1 | 6 | qSLL-6 | Morphological trait | Culm/leaf | RM204 | RM217 |
| Osa06LNT0329100.1 | 6 | qTLL-6 | Morphological trait | Culm/leaf | RM204 | RM217 |
| Osa06LNT0329100.1 | 6 | qTLWR-6 | Morphological trait | Culm/leaf | RM204 | RM217 |
| Osa06LNT0329100.1 | 6 | alk6-1 | Physiological trait | Eating quality | RM190 | RM253 |
| Osa06LNT0329100.1 | 6 | hr6 | Physiological trait | Eating quality | RM190 | RM253 |
| Osa06LNT0329100.1 | 6 | d4 | Morphological trait | Dwarf | nan | nan |
| Osa06LNT0329100.1 | 6 | nan | Resistance or Tolerance | Drought tolerance | RM170 | RM204 |
| Osa06LNT0329100.1 | 6 | nan | Morphological trait | Shoot/Seedling | OSR19 | RM225 |
| Osa06LNT0329100.1 | 6 | Qbph6 | Resistance or Tolerance | Insect resistance | RM510 | RM314 |
| Osa06LNT0329100.1 | 6 | AsTol | Resistance or Tolerance | Other soil stress tolerance | RZ516 | RG213 |
| Osa06LNT0329100.1 | 6 | Lhd1(t) | Physiological trait | Flowering | nan | nan |
| Osa06LNT0329100.1 | 6 | En-Se1 | Physiological trait | Flowering | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)