© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0329200.1
CCTGGCCAACTAAACTTTGAAATAAGATTCATAGTAAGTTTATTATTACAATGGCTGCAACCCATAGGTTTGCATTATATAGTAAATGCATACATGCATACTAATTTAATGGATAGAGCTAGCAAACCATAACAGATGGGGCTAGAGGAGAAATCAAGCGTAGCGTGCTTATTCAAATACATGAAAATTGAAACAAGTGAACAGGTTTGGAAATAGTAATCATGCAACTGATCAGTAAAAACGGTAGAGATATGGAACATATAAATGCTGACGATGCCAACTCCAGGACCAAGCCAAGGGATGAGCCATTGATGCAAAGGCCATCATCCTGTTCTGCTGCTCACTAAGGCTCCTGCTTTTCGTTGCTCCACCTCTAGTCCCCCTTAGGCCTTGTTCGGTATGGAAGGGGTCTGAAAGGGTTTAAAGAGGAATAATTCCACACCACAATAGGTGTGAAATAAATCCCCTTCAATCCACCAAAATGTCCCTATCGAGTGTTCGGGTCGTGAGCGTCGGACGGTTGGGATGTGTCTTTGCTACGTTCAAGATTTTTTCTTCCAATTCTGAGGCCACATCTCTTGGAGTTGAAGGTGGATTGCCAATAATATCTACATTGACTCTGCAGAGGGTGCTGGGGAGGTGCTCGAAGACAGAATCGTTCTCACCAACCTCATCCAATACTATGTCAATTCGGAGGTCCTTCAGATTAGGCATGGAATCAGGCATAAACAACACGTTGCAAAGAAACGCAAACTTGAGACATCGGAAACCATGGTTGCTGATGGTGAGCCATGATCCTCGTGTGTCTGAACAAGGAAGGGCAAGATACTCGAGAGCTTTCAGGTCTCCAAGCATTTCGAAATCGTTCTGAGTAACATATGCTTTACTGAGCTCTAATTTCTCAAGCTTGGCAGCAAGGCGAATCCAACTTGGAATGTTTATCATCCGGGGCGTGCTTTCGACGCCGAATCTCTTGAGGTTTTGTAGGGCAAGGAACCACGGATCAAACAAGAAGCGTTCCATAAACACAACAAAATCCAGAGAATGGAGGCTATGCCTGTCCAGTGCATTAAGTGAGGAGGTGAAAATCTTCTTGCAGCTCTTTTTATGCTCGGCTTGGGCCTCATCAGAATCTCTAGCATGGTAAGCCTTCCAATATACAACTAGTACTCTCAGCTTGGTAAGCTCACCTAGCTCCTTCAAAAAGCTTCCTGGTTGACAGAAGAGCGTGAGACCTGTGAGCTCCTCCAATGCTTGCATCTTGCTAACACCTTCTGCTGGGAACTTCACATCTTGACTGACAGAAAGGCGAGCCAACCGCTGAAGTAGAACAATGGATGGTGGTAATTCTTTAACTTCACTACCTCTTATATCTAATGTTTCCAAATGCTGGAGACGTCCAATATTGGCAGGGAGCACAGTCACTCTTCCCCTAATTCTCAGATACTGCAAATGGACTAACTTTTCAATATTAGCAAGATGGTTGTTTGTCAATGATTGGCACCCGTCTAGATCCAGTACTCTTGCAACTTTAAATTCTGATAGAGGATGGAATCCTGTGTAGTCCACGGAACAAATAAGTGATCTAACATGAAGCTTAATCGGCATCATCCTTGAGGCAAACTCCTCTTGGCAGTAGTTACCCTGGAGAGACAGGCGACGAACCTTGCAGTAGTTGCTATGCTGCAGAGGTACGAGACCAGACGGATCCAATAAGAACAAAAAGTTCTCCTCTACTGATTTGGACACTATGAAATTAAGAATGACGTCGTGAACTCGACAGGTCAGCACTTCACCGTAGTGCTCATTCCATGGTTGGATCAAGCTTCGGTTTATCAGCACGTTGAAATACCTCAACCCTGCTTCATATACATTTTCTCCTGGCCTTGCATTGATAAATCCTTCTGCAATCCATCTACTTACCAAACTACTCTTTGCAATTTCACAATCTTCTGGAAATGCACTCAAGTATAACAGGCAACTTCTTATATCATGTGGAAGATTATAATAACTGAGTGCTAACACTGACTGCATGGTCTCGAGATACTCATTTCCTGGTAGTGGAGAACTGATAATTTTTTTCACCTCATTCCAATGATATAACGATTCATGATCAGCCAAGAAGCTGGATATGGAAATAATTGCTAGAGGTATACCATCACACCTTTTCAGTATCTCTTCAGAAGCTAGCTCAAATTTAGGAGGACATTTCTCTTCACAGTCAAAAATTCTTTTGTAAAATAACCTTTTGGAGTGAGCGCCATCAAGATGTTTCATTTGATAAACAAAACCACCATGAGAAGATGAAGATGATATTGCCACTTCTTTCACACGTGTCGTCAAAATTATTATGCTACCATGACTAGTTTTGACCAATGCTTCTCCAATGAAGTTCCATGGTTCCGGGCTCCATATATCATCCACTACGATAATATACC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0329200.1 | 6 | 3235817 | T | C |
| Osa06LNT0329200.1 | 6 | 3234614 | C | A |
| Osa06LNT0329200.1 | 6 | 3234961 | A | G |
| Osa06LNT0329200.1 | 6 | 3235321 | A | G |
| Osa06LNT0329200.1 | 6 | 3235618 | G | C |
| Osa06LNT0329200.1 | 6 | 3235737 | C | T |
| Osa06LNT0329200.1 | 6 | 3236293 | T | C |
| Osa06LNT0329200.1 | 6 | 3236448 | C | T |
| Osa06LNT0329200.1 | 6 | 3236465 | G | A |
| Osa06LNT0329200.1 | 6 | 3237067 | G | T |
| Osa06LNT0329200.1 | 6 | 3234564 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0329200.1 | osa-miR156b-3p | Cleavage | 4.5 | 21.583 | 1 | 21 |
| Osa06LNT0329200.1 | osa-miR156j-3p | Translation | 4.5 | 13.561 | 1 | 22 |
| Osa06LNT0329200.1 | osa-miR399k | Translation | 5.0 | 19.32 | 1 | 21 |
| Osa06LNT0329200.1 | osa-miR166k-5p | Cleavage | 4.5 | 23.262 | 1 | 21 |
| Osa06LNT0329200.1 | osa-miR168b | Translation | 5.0 | 19.754 | 1 | 21 |
| Osa06LNT0329200.1 | osa-miR418 | Cleavage | 4.0 | 17.579 | 1 | 21 |
| Osa06LNT0329200.1 | osa-miR395v | Cleavage | 4.5 | 16.096 | 1 | 21 |
| Osa06LNT0329200.1 | osa-miR395v | Translation | 5.0 | 18.612 | 1 | 21 |
| Osa06LNT0329200.1 | osa-miR1435 | Translation | 5.0 | 12.712 | 1 | 20 |
| Osa06LNT0329200.1 | osa-miR1870-5p | Translation | 5.0 | 19.948 | 1 | 24 |
| Osa06LNT0329200.1 | osa-miR1882e-3p | Cleavage | 3.5 | 16.622 | 1 | 24 |
| Osa06LNT0329200.1 | osa-miR1320-5p | Translation | 4.5 | 20.456 | 1 | 21 |
| Osa06LNT0329200.1 | osa-miR2093-3p | Translation | 5.0 | 23.895 | 1 | 20 |
| Osa06LNT0329200.1 | osa-miR2118h | Translation | 5.0 | 14.527 | 1 | 22 |
| Osa06LNT0329200.1 | osa-miR2118k | Translation | 5.0 | 14.527 | 1 | 22 |
| Osa06LNT0329200.1 | osa-miR5511 | Cleavage | 4.5 | 20.275 | 1 | 21 |
| Osa06LNT0329200.1 | osa-miR2275c | Cleavage | 3.5 | 14.721 | 1 | 23 |
| Osa06LNT0329200.1 | osa-miR5519 | Cleavage | 5.0 | 15.006 | 1 | 21 |
| Osa06LNT0329200.1 | osa-miR2095-5p | Cleavage | 4.0 | 11.419 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0329200.1 | 6 | Qbph6 | Resistance or Tolerance | Insect resistance | RM510 | RM314 |
| Osa06LNT0329200.1 | 6 | AsTol | Resistance or Tolerance | Other soil stress tolerance | RZ516 | RG213 |
| Osa06LNT0329200.1 | 6 | En-Se1 | Physiological trait | Flowering | nan | nan |
| Osa06LNT0329200.1 | 6 | Lhd1(t) | Physiological trait | Flowering | nan | nan |
| Osa06LNT0329200.1 | 6 | qGYD-6-1 | Morphological trait | Seed | RZ398 | RM204 |
| Osa06LNT0329200.1 | 6 | qTLWR-6 | Morphological trait | Culm/leaf | RM204 | RM217 |
| Osa06LNT0329200.1 | 6 | alk6-1 | Physiological trait | Eating quality | RM190 | RM253 |
| Osa06LNT0329200.1 | 6 | hr6 | Physiological trait | Eating quality | RM190 | RM253 |
| Osa06LNT0329200.1 | 6 | qSLL-6 | Morphological trait | Culm/leaf | RM204 | RM217 |
| Osa06LNT0329200.1 | 6 | qTLL-6 | Morphological trait | Culm/leaf | RM204 | RM217 |
| Osa06LNT0329200.1 | 6 | d4 | Morphological trait | Dwarf | nan | nan |
| Osa06LNT0329200.1 | 6 | nan | Morphological trait | Shoot/Seedling | OSR19 | RM225 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)