© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0329300.1
ACAATAACAGGAATGCTTCATTTTATTATTGAATGGTTACACTTACATGAGTGTCTCGCGGCGTCACAGCATAGTCAAAGGAAACCACAATTTAACACGTTAATTTTATTATTATTTCTACTGGAAGAACGCCAGTTTTGTTGTTTTTTGGAGAAAAAAAAATCCCAGTTTTGTTATTACTGGAAGCAATGGAGACTTGTACTACCAATGTCCGAACAGCTTTACTCGATACTCCAAAAAGGCAGCTAAGAAATGAGCTAAAACAGAGGCTTCTTGCCGTTGAGAAGACCCATCAAGTGGTCGAAGACGTGCGAGCCGCCGTCGCGGATGCCCGAGTGCATGTACTCGTTGGTAATCCAGAGCCGGATGCCCGCGATCTGGGAGGCCGTCTCCTTGGCGATGTTGAAGTTGACGTACATGTCCTCGTAGTAGACGGCGGCAGCCACCGGGACCTTATTGTTGTTCAGCACGTTGACATCATACAGTGGGGGCCAGTCCTCTTTGTGCGCTAACATATGGGCAGTCTCCTTCAGGGGTCGTAAGGCGTGAATCTCATCAAAAATACATGGAAATACCATCTCTCCAGTAAAATAAACAGGTCTGCCTTCTTTTATAGCCTTGATAGGATCAAACAAACTTTCACACTCACTGCCAATCTTGTGAGCCGACCATTTTGATGGAGAACCCTGACAATAGATAGACTCATGCAAGAGAGCATAAAGAGGATTTTGATCAAAACCTAACCACCTCTCAAACTCTTTCAGGAAGTAATAACTTATAGTCTTTTTTGCGCCAGGGACTAATATAGGGTCCCACACCCTCTCAAACAGATAATGCAGCCTTTCAAATCCTCCACCGGAGCCCAAACCAGATAATCCAAGGCACTGCAACATCTTAGGAGTTAACCTGCCACCTGATGGAAGAGAAACTCCTCCACCTTCAGATTCATTTAAATATCTTACAAGCTCATGAATGACTTGTATATCTTGAGGATATCTCGCATAGTACTTCTCATTTTGCTGCTGAACTTGTTTAAAGCAGGCCCTGTACACAGTATCTGCAGTACAGGCACTCCCTAGAGGTGGAAGCCCCCCAGTCAAAAGAACAGATTTCAGGCCTTCTGGAGCAAAACTCAAATAGGTAACAGCACAAAATCCACCATAACTTTGTCCTAAAACCGTCCAAGGCTTGGCATCTGGAACAAGATGCAGGCGAATAAATTCCGCATCTTTAACTATGCTATCTGCCCTGAAATGCTTCAAATACTCCACCTGTTCTGCTGCAGATGTTATTTGGGAAAGAGATGATGTTGTCAACGGTGTTGACAGTCCTGTTCCTCGCTGATCTAGCAACACAACACGGTATTCTTCACATGCTTTCTTCATCCATCCACTTGCTTCTGTGGGACGGGGACTTTCAAATCCAGGTCCGCCTTGTAGAAACAACAAATAAGGCAAAGGCAAGTCCTCTTTTCCAGCTGCAAGGATACACTTGATATAAGTTCCCTAAACATTACAGATCATGCTACCTCGCAAGAAATTAAGTTTCCCCTAACATGAAACTGAACCATAGCGCAACCAGTCCACTTAACCTTAACTCCATCACGCATTCGCTTCATCAACAAAATGTTGAGTTTGGCATACACTTTGCTCACCATTTATACAATAACAACATAATGCATTACTTTCTATATGTCACAGTAAGCAAGCTCTCTCCATGAACTAGCATTTATTAATAGTCGTAATTGATGGTTCGACCAGTGCAGTGTGCATGTATCAAGCATTCTCCTACCTCCCAAACTACATATACACCCTAATCTGGATCCAGCAAATATACAATGATCTCGATACCAACTTATCCATCAGTCCGATCACAACAACTGCACAGAACGCAAATTGATGCTAAGGATTCGCTTATCCTCTATAGTCACCGCGCCCTCCCGAGCCCACCGATCGATCCCGCGGTGGCTCGGTATATGGACACCGCAGCTGGATGGGTAGTAGAGGCGGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0329300.1 | 6 | 3221953 | A | T |
| Osa06LNT0329300.1 | 6 | 3219171 | T | C |
| Osa06LNT0329300.1 | 6 | 3219489 | C | T |
| Osa06LNT0329300.1 | 6 | 3219943 | G | A |
| Osa06LNT0329300.1 | 6 | 3219962 | C | G |
| Osa06LNT0329300.1 | 6 | 3220183 | A | G |
| Osa06LNT0329300.1 | 6 | 3220322 | G | A |
| Osa06LNT0329300.1 | 6 | 3220387 | G | A |
| Osa06LNT0329300.1 | 6 | 3220605 | T | C |
| Osa06LNT0329300.1 | 6 | 3221481 | G | A |
| Osa06LNT0329300.1 | 6 | 3222061 | T | C |
| Osa06LNT0329300.1 | 6 | 3222254 | A | C |
| Osa06LNT0329300.1 | 6 | 3222258 | C | T |
| Osa06LNT0329300.1 | 6 | 3221189 | C | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0329300.1 | osa-miR5529 | Cleavage | 5.0 | 15.867 | 1 | 21 |
| Osa06LNT0329300.1 | osa-miR395w | Cleavage | 4.5 | 11.457 | 1 | 22 |
| Osa06LNT0329300.1 | osa-miR395w | Cleavage | 4.0 | 12.501 | 1 | 22 |
| Osa06LNT0329300.1 | osa-miR1424 | Translation | 4.5 | 17.553 | 1 | 21 |
| Osa06LNT0329300.1 | osa-miR1428e-3p | Translation | 4.5 | 16.139 | 1 | 21 |
| Osa06LNT0329300.1 | osa-miR2928 | Translation | 5.0 | 14.793 | 1 | 20 |
| Osa06LNT0329300.1 | osa-miR395x | Cleavage | 5.0 | 12.501 | 1 | 21 |
| Osa06LNT0329300.1 | osa-miR5160 | Translation | 5.0 | 8.375 | 1 | 22 |
| Osa06LNT0329300.1 | osa-miR5485 | Translation | 5.0 | 14.405 | 1 | 21 |
| Osa06LNT0329300.1 | osa-miR5507 | Cleavage | 5.0 | 22.798 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0329300.1 | 6 | qSLL-6 | Morphological trait | Culm/leaf | RM204 | RM217 |
| Osa06LNT0329300.1 | 6 | qTLL-6 | Morphological trait | Culm/leaf | RM204 | RM217 |
| Osa06LNT0329300.1 | 6 | qTLWR-6 | Morphological trait | Culm/leaf | RM204 | RM217 |
| Osa06LNT0329300.1 | 6 | alk6-1 | Physiological trait | Eating quality | RM190 | RM253 |
| Osa06LNT0329300.1 | 6 | hr6 | Physiological trait | Eating quality | RM190 | RM253 |
| Osa06LNT0329300.1 | 6 | d4 | Morphological trait | Dwarf | nan | nan |
| Osa06LNT0329300.1 | 6 | nan | Morphological trait | Shoot/Seedling | OSR19 | RM225 |
| Osa06LNT0329300.1 | 6 | Qbph6 | Resistance or Tolerance | Insect resistance | RM510 | RM314 |
| Osa06LNT0329300.1 | 6 | AsTol | Resistance or Tolerance | Other soil stress tolerance | RZ516 | RG213 |
| Osa06LNT0329300.1 | 6 | qGYD-6-1 | Morphological trait | Seed | RZ398 | RM204 |
| Osa06LNT0329300.1 | 6 | Lhd1(t) | Physiological trait | Flowering | nan | nan |
| Osa06LNT0329300.1 | 6 | En-Se1 | Physiological trait | Flowering | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)