>Osa06LNT0329700.1

GGGCTTCAAGCCTAATAGACTCCAAATGGTCCAGACATAATCCCTCACTTGGATCAGCCCATTGCCCCACTCTCCCCGTACTGCCGCCGCAACGAGAGCACCGTCAACCACAGCAGCAGCTCATGGCGCCGCCGCTCCCGGGGCCGGTGGTGCCCGGGGGTCGCCGGAGGCGGAGCCGAACGCCCGCGCGCAAGGCTATGTGCCGCGACGGCCGGTGAGCGCGCTGCCCGTATCTTGCTGCCCGGTGGGGGCGGCACGGCTCGGCGTGGAGAGCCCTTTGCAATGGTGATGCCGGAGCGGAAGGATTATTCGAGATTGATGCGTGGGCATTGGCTGGCGTCGCCGCGCGCATAATAAATGATGCAGATACCAGCTTTGTATCTCGAGTCATCGGCTGCAATGGGAGGAGCGTGTCGGTCGGTGAATCGAAGCTCTTCCAGAGGCGATGACCGGCTGGAT

Explanation	CPC Score
noncoding	-1.51003

Transcript ID	Chromosome	Locus	Ref	Alt
Osa06LNT0329700.1	6	3293248	G	C
Osa06LNT0329700.1	6	3295670	T	A

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa06LNT0329700.1	6	AsTol	Resistance or Tolerance	Other soil stress tolerance	RZ516	RG213
Osa06LNT0329700.1	6	Lhd1(t)	Physiological trait	Flowering	nan	nan
Osa06LNT0329700.1	6	qSLL-6	Morphological trait	Culm/leaf	RM204	RM217
Osa06LNT0329700.1	6	qGYD-6-1	Morphological trait	Seed	RZ398	RM204
Osa06LNT0329700.1	6	qTLWR-6	Morphological trait	Culm/leaf	RM204	RM217
Osa06LNT0329700.1	6	En-Se1	Physiological trait	Flowering	nan	nan
Osa06LNT0329700.1	6	qTLL-6	Morphological trait	Culm/leaf	RM204	RM217
Osa06LNT0329700.1	6	alk6-1	Physiological trait	Eating quality	RM190	RM253
Osa06LNT0329700.1	6	Qbph6	Resistance or Tolerance	Insect resistance	RM510	RM314
Osa06LNT0329700.1	6	d4	Morphological trait	Dwarf	nan	nan
Osa06LNT0329700.1	6	nan	Morphological trait	Shoot/Seedling	OSR19	RM225
Osa06LNT0329700.1	6	hr6	Physiological trait	Eating quality	RM190	RM253

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus