© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0330000.1
GAACAAATTGTGCGTTCCGGCATTATATTGGTATAAATCTTGTGAGTGCATTCTACAGATTTGATGGAACATGTTACATGTGTACAAATCGCACAAAATTGTATTGTTTGTAAAAAAAAAAAAAACGAAGAATGGAACACGTCATCCATGATGCCTGACTCTGATCTTCAGTTGTGGCAATTCAGTGTTCTGCAGATTTCGGCTTATCTTCTGTTGTGTCATCACATTCTTTCAGATATATCTCACAATTTGGATCATAAGCAACCGCTCGTTGCACGAATTTGACAGCCTCAGATTTCCGTCCCTCATTAATTAGTATACTTCCTAGAGCAACCAATCCTTGGTAATAGCATTTTTTGTTAATGGGTTTTTCTGGTTCCTTGAGCTCTGCTAATCTTTGGAGGTTTTCGATCGCCATTTTGCTATCACCCTGCCGCATACGTGAAAGCCCTGCACCGTAGCATGCAAGCACAAGAAGTGGATCCTGCTCTTCAATCTTTGGTATAGCATGTTCAAAACACACTGTGGCTTCAGGAAACAACCTGTTTGAGAACAATGTCTGTCCCATACCAATCAGTGCTACATAAAGACTAGAGTCTTTCTCTATTGCTGTTCTGATCAGTGGAATAGCTTGATCCTGGTTTCCAGTTTCCAAATGTTGTAATGCTTGTTCAAGTAGTTCCTCAGGTGAACTGGACGCAGATACTTTTCCTTCCATAATGTTATTGGCGGTTTCATTATTTGTTGATGTCAAATTAGTGTGCATGTGAGCATCTTCAAGAGGCCGTTCCTGCATCATCTTATGACCCACACGAGGAAACTTCTGGTGAGCTCTAGTATCAGGCAATCCCAACACCTTCTTGACAGCGTCATTTTTGAGGGACAATTGCTGAGCTACAGTAATTAAACCATTTGTAGTCCAGTAGACCAGGCTACCCTGAGGAATCACATACCCAATAAGAAACAAAGGGATAGTCAGGATTTCAAGGTATACCCTGTAGTACTTTGCCAGTACGCCAAAAATACCTGGATAATGCTTGGTATGGGTTCCATGAAAGGCAATCTGAATATTTAAGTAATGGAGACCTGCAACTAGGGTAGGAAAAACAAGGCCCGAAGAACCATGTGGAAACTCGGTCAAGTTATGAAACCACAGAATACCACCATTATCTAGTCCAGGGTGATTGCTCAAACACATAGTCCTTATTGTTGACATCCACAGTATAAAGCACGGGAACTGGATTGAAAAGTAGGCCCAGTTCCAAAGAAAGGAAGGGCAACCAAGTTCTCGCCTTTTCTTCTGATAGAGAGAGAACTGGTCACGAAAGCTCCTTCATTCTGGTAATAGTTTGCCAATTTTAGCAGCCTTCTTAATTTGTGTTATAAGTACTGGAAGTATCAACAGTCTCATGGCCACAGTTGACAGAGAAATTGTTATCCACCATGGGATCCCGGTGAGGTTATGAAATCCGTCGAGGATGTCAATCAGCGAGCTGACAGCGAACCCCGACGCGCTTCCGCCATCTCCTGCGGCGGCTACTCCGGCTGCATCCGCCGACGCCGCGCTGGTGGCGACCACTTCCCCGAAATCAGCACCACCCGCGTCGTGCAGGTACGCGCCTTCCCCCTCGGCGCGCACGTCCTCCTCGGGAGCCTTCTCCGCCGCGGCGGGGCCGGCCGGCGGCGGCGAGCGGGGGTACCAGGAGAAGCTTCGCGCGGGGACGGCAGCGAAAGGGACTAGCAGCGGCGGCAAGCGAGGGGGTGACGGGAGCAGCGGCGCGCGGGTGGTGGGGCTTGGATCCGAGGCGGAGAGGTGGTGGTGGTGGAGCACGGCCAGCGGCCGCGGGAGGCGCCGACCGCCGCCGCCGCCGCCGCCGGCGAGGCGGCCGAGGAGGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0330000.1 | 6 | 3591869 | C | T |
| Osa06LNT0330000.1 | 6 | 3588995 | A | C |
| Osa06LNT0330000.1 | 6 | 3589061 | G | A |
| Osa06LNT0330000.1 | 6 | 3591096 | A | C |
| Osa06LNT0330000.1 | 6 | 3592505 | T | C |
| Osa06LNT0330000.1 | 6 | 3593726 | G | C |
| Osa06LNT0330000.1 | 6 | 3595105 | A | G |
| Osa06LNT0330000.1 | 6 | 3595186 | A | T |
| Osa06LNT0330000.1 | 6 | 3595497 | T | C |
| Osa06LNT0330000.1 | 6 | 3588834 | T | G |
| Osa06LNT0330000.1 | 6 | 3591885 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0330000.1 | osa-miR5536 | Cleavage | 5.0 | 12.192 | 1 | 22 |
| Osa06LNT0330000.1 | osa-miR1437b-3p | Translation | 4.0 | 16.913 | 1 | 24 |
| Osa06LNT0330000.1 | osa-miR156c-3p | Cleavage | 4.0 | 17.941 | 1 | 22 |
| Osa06LNT0330000.1 | osa-miR156f-3p | Cleavage | 4.5 | 17.941 | 1 | 22 |
| Osa06LNT0330000.1 | osa-miR156g-3p | Cleavage | 4.0 | 17.941 | 1 | 22 |
| Osa06LNT0330000.1 | osa-miR156h-3p | Cleavage | 4.5 | 17.941 | 1 | 22 |
| Osa06LNT0330000.1 | osa-miR156l-3p | Cleavage | 4.5 | 17.941 | 1 | 22 |
| Osa06LNT0330000.1 | osa-miR1425-5p | Translation | 5.0 | 15.196 | 1 | 21 |
| Osa06LNT0330000.1 | osa-miR1436 | Cleavage | 4.0 | 17.514 | 1 | 21 |
| Osa06LNT0330000.1 | osa-miR5077 | Translation | 5.0 | 15.934 | 1 | 19 |
| Osa06LNT0330000.1 | osa-miR5498 | Translation | 5.0 | 19.594 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0330000.1 | 6 | alk6-1 | Physiological trait | Eating quality | RM190 | RM253 |
| Osa06LNT0330000.1 | 6 | hr6 | Physiological trait | Eating quality | RM190 | RM253 |
| Osa06LNT0330000.1 | 6 | d4 | Morphological trait | Dwarf | nan | nan |
| Osa06LNT0330000.1 | 6 | Qbph6 | Resistance or Tolerance | Insect resistance | RM510 | RM314 |
| Osa06LNT0330000.1 | 6 | AsTol | Resistance or Tolerance | Other soil stress tolerance | RZ516 | RG213 |
| Osa06LNT0330000.1 | 6 | En-Se1 | Physiological trait | Flowering | nan | nan |
| Osa06LNT0330000.1 | 6 | Lhd1(t) | Physiological trait | Flowering | nan | nan |
| Osa06LNT0330000.1 | 6 | nan | Morphological trait | Panicle/flower | RG138 | RZ398 |
| Osa06LNT0330000.1 | 6 | nan | Morphological trait | Seed | RG138 | RZ398 |
| Osa06LNT0330000.1 | 6 | nan | Morphological trait | Panicle/flower | RG138 | RZ398 |
| Osa06LNT0330000.1 | 6 | nan | Physiological trait | Source activity | RG138 | RZ398 |
| Osa06LNT0330000.1 | 6 | nan | Physiological trait | Source activity | RG138 | RZ398 |
| Osa06LNT0330000.1 | 6 | nan | Morphological trait | Seed | RG138 | RZ398 |
| Osa06LNT0330000.1 | 6 | qSLL-6 | Morphological trait | Culm/leaf | RM204 | RM217 |
| Osa06LNT0330000.1 | 6 | qTLL-6 | Morphological trait | Culm/leaf | RM204 | RM217 |
| Osa06LNT0330000.1 | 6 | qTLWR-6 | Morphological trait | Culm/leaf | RM204 | RM217 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)