© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0330100.1
CACATCCTTCAGCTCTTGTAAAATCTACTAGTAGATTATTTGTAACAACATTGGTTTTACATGTTACAATTGTTGGCCCTCTAATCAATCGAATACTTCATGCATTCATGGTCAATAAAATGAAATTGTTACACAGTTATAACTTACATTCAGGAACCTATCCTATCTCCTCTTAGAAACTGGGCTTACCTTGCAAACTTCCACATCAAAACCAAAGTCCATGAGAACAAGTATCCAGGCACGCTGTTGCTCAGACAGCTGGTCCCTTGGCCCTTTGACCTCCACAAGTTTAGCTTCACCGCCTCCTCTTTCATCAAGGAAACGCCATAGCAGCAGATCAGGCATTCCACTGGACCAGCTTCTGTAATCGAGGGCTAGATGCCGGAGCAGAGATGCCAAGCGATGGCCACCGGTGCATACGACGGCAGCTCGTAGATCTGTCAAGGAATGCCGGTCCCAGTTAACACCCCTGCAGGATGTCCCCTGGTGTAGCTCCCAGGAGCTGATAAGAATCTCTTCAGCAATGCCATCTTGAATCTTTTTCAGCTGGGACTCTATAAGGTCCTTTCTTGATCTGTAGAATTCATCAGTTTCCAGGTCCAGAGGGGCTGTCTGAAATTTAGTCTGGAAAACATCTGGTACGTCTGAAAATATTGCATCCCACATTAGAAGGCCAAAGATAGTCATCCAAATGCCACCTTCTGAATGGGTACCTCGCCAACCCCCTCCTTCATCTGCGTAATATTGTAAAGCCAATTGTTCTACCCCACAAAGCTCACCATCGTATCCGTAAAATACATTCTTTGCACCTGTTTCACAATTTAACGGTCTTCCTTCTATATTTACCTCTTTTATATTTGTCGTAACAGCATTGGCATAACTGGGAACTTTCCAGCGCCGTGGAGGTTTGCTTAAACGCACAACTCTCCTTTGCAGTGCAATCTTTGAACCAGCACGGACCCATGGATCAATTACCCCTGCTTCAGCTATTGACAGGCTCTCATTGGAACGATTCATGTGCTCCAAATCAACAGATAGTCTCAAAGCCCAATATCCTCGCTTTCTATCCGAAGCAACAGTACTGAGTAGTCTCTTTAGAACTCTTATTGCATCAGTATACCTACGGTCTCGTTCATAAACAGATACACCTAACGTAAGTATCTTCGAATAGACCGAGGAAGCTGAAAAACGTGAGAAGAATGATGGGGGAGGTTCAGCCCTAGTTGCATTTTCTTCTTTTGGTGCTGTGCTTAGTCGATTCTCAGATAACTCAATGCATCTTGTCACCATTTCCATGTTACTATTATCAAGAGATTGATCCATTACCTGTGCCACTTGAATAGCCTCTTCATACTGTAGTAGATCACTTATTTCCTGAAAAACGCGGTGAGAAATGGTGCAGGCATAGACTGGAAACCTCACCAGACCAAGATCCACTAACAGAAAGAATGAGAGATCTTGATCACCATTTAGAAAAAAGAGTCTCTGGACACGCCACAGAAGTTCATCAGCCACATCAGAAGTTCTTATGCATGTTCCTGTCCACTTCAGAATTCGCTTTGGTAGAATTGTGCTGCATGTTCCAGGGGTGAATTTTCTTAAAAGGCCATGATATCCACAAAGGCAACAAGCATAGAGCCTTTACCAGGTTCCATTACGATATAAATACAGAAGGGTGCTAAGAAGCTCATGTCGGCGTGTGCAGCTGACGTTATTCTTTTGGAGCTCTTTTAGAATTTCTTTCATTTCAGGAACACTTAGCACGTCAATAACCTCCTTCAAATCATAGTTAGATAGATCATCCATGCAGGATATCATGTCAATATAACCTGCCAACTTAAGTTCCATGGCTGCCTGCCCCAGATCTGATATCTCACGATATGAGATACTGCTCATTCGAAACCATGGCCCTTTTCGAGTGTAGATCCTAACAAAGAGCCTTTGTCCATCATCTGGTAACAACTGAAAAGAGTCTAAAAATGACTTTTCCTTGTCACTAAAAAGGTGTGAATGGTTTGCCATCACATCTGTTATCATCGAACTAAAATTTGTCTGGTATCTCGTACTGCTAGGTTGCAGCAAATTTCCATTTCCAACAGCACATATGAAATTTTCCCATAAGAACTGTGGATGCTTCAGATCATCATATGTCTCATTTTCATCTGTATATTTCTGGCACTTAAGCTGGATGGGAACATGATCAAGTTGTTGTTCAGGCACGCCAACCACACATCCCTCGCATTCAATGTAGTGTCTGTCCAGTAGAGGAGCCAAAACTTTAGCCAGCTCTCGAGGTAAGTATCCAAGCATCTGTTCACATTCATAGCCTTGATAGCGTCAGGGTCCTTTGCATTCTGAGGATCTCGGAGAAGAGTAATGCTCGCACCTTCTTGCAATTCTATGTTTTCATGGAACCTCCTGCCCACTATGACAGTGTCAACTACTACCGAATTGCTAGAATCTGTCACTGAAAGCAAACCAATAGTACTCGAAGTTGCATCAGTTGAAGGCATGTGGGACAAGCACTTCTTGACTACACCATTGTTTGCAGTATTTTCTGTATATGGTAATAATACATTGGGTGGTAGACAGGTATCACATGTCTCCGAGATGTCAGGAGAGCCATGCAGGCAGCCAGGTGATGAAGCATTAGCACTTCCCTTTGAATTGACCTTGTCATTATTCAACGAGAAGAAAGCTCCATCGCTAGATACATTTCCATCGGTCGGTTCCATATGCTCTGCCTCATCACTGGTGTTCAAATTGTTCAAAGCGTAATCATCTGTGGCTTTTCTACTGAAACTGAAATCAAGAAGGGTGCTCTGAGTTAACTTCCGTTTTGTTCCTCTTGTAAGGCATATATCGAGGTGCGTGTTGACGCAGTAATCCGTGCCGCGGATGGACTCGCCGCAGACGGGGCACGCCACCCACCCCGCCGCGCCGGCGGCGTCGCCCCCTCCCGACGAAGAACCACCCGCCGCGGCTTCCCTCTCCGCATCGGCCGCATCATCCTGAAGGGAGCGGGAGGGGGGCACGGCGAGGGCGAGGGCGGCGGGGAGAGGGGAGCGGCGGCGCCGCCCGATGAGGCGGACAAGGCTCTCCCGCCCGGTCAGCATGGCCTCCTTCGCCGCCGCCGCGGGGGAGACGAGGTGGCGGCGCGGCGAGCCCGGGAAGGAATGGAAGTGGTCGAGAGAGCCGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0330100.1 | 6 | 3600543 | A | G |
| Osa06LNT0330100.1 | 6 | 3600138 | C | T |
| Osa06LNT0330100.1 | 6 | 3601444 | T | C |
| Osa06LNT0330100.1 | 6 | 3602816 | A | G |
| Osa06LNT0330100.1 | 6 | 3603823 | A | G |
| Osa06LNT0330100.1 | 6 | 3603450 | G | A |
| Osa06LNT0330100.1 | 6 | 3600992 | A | G |
| Osa06LNT0330100.1 | 6 | 3599147 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0330100.1 | osa-miR5813 | Cleavage | 5.0 | 19.658 | 1 | 22 |
| Osa06LNT0330100.1 | osa-miR5837.2 | Cleavage | 5.0 | 12.511 | 1 | 21 |
| Osa06LNT0330100.1 | osa-miR160a-5p | Translation | 3.5 | 21.052 | 1 | 21 |
| Osa06LNT0330100.1 | osa-miR160b-5p | Translation | 3.5 | 21.052 | 1 | 21 |
| Osa06LNT0330100.1 | osa-miR160c-5p | Translation | 3.5 | 21.052 | 1 | 21 |
| Osa06LNT0330100.1 | osa-miR160d-5p | Translation | 3.5 | 21.052 | 1 | 21 |
| Osa06LNT0330100.1 | osa-miR159f | Cleavage | 5.0 | 15.469 | 1 | 21 |
| Osa06LNT0330100.1 | osa-miR160e-5p | Translation | 3.5 | 21.052 | 1 | 21 |
| Osa06LNT0330100.1 | osa-miR160f-5p | Translation | 4.0 | 21.052 | 1 | 21 |
| Osa06LNT0330100.1 | osa-miR169i-3p | Cleavage | 5.0 | 23.481 | 1 | 22 |
| Osa06LNT0330100.1 | osa-miR408-5p | Cleavage | 1.5 | 12.159 | 1 | 21 |
| Osa06LNT0330100.1 | osa-miR1441 | Translation | 5.0 | 16.413 | 1 | 21 |
| Osa06LNT0330100.1 | osa-miR1850.1 | Translation | 3.5 | 11.458 | 1 | 21 |
| Osa06LNT0330100.1 | osa-miR1854-5p | Cleavage | 4.0 | 16.308 | 1 | 21 |
| Osa06LNT0330100.1 | osa-miR1320-5p | Translation | 5.0 | 21.875 | 1 | 21 |
| Osa06LNT0330100.1 | osa-miR2092-3p | Cleavage | 4.0 | 20.451 | 1 | 22 |
| Osa06LNT0330100.1 | osa-miR2106 | Cleavage | 4.0 | 24.125 | 1 | 21 |
| Osa06LNT0330100.1 | osa-miR5160 | Translation | 4.0 | 16.838 | 1 | 22 |
| Osa06LNT0330100.1 | osa-miR390-5p | Cleavage | 5.0 | 21.539 | 1 | 21 |
| Osa06LNT0330100.1 | osa-miR5491 | Cleavage | 5.0 | 13.33 | 1 | 21 |
| Osa06LNT0330100.1 | osa-miR1855 | Translation | 4.0 | 17.103 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0330100.1 | 6 | qSLL-6 | Morphological trait | Culm/leaf | RM204 | RM217 |
| Osa06LNT0330100.1 | 6 | qTLL-6 | Morphological trait | Culm/leaf | RM204 | RM217 |
| Osa06LNT0330100.1 | 6 | qTLWR-6 | Morphological trait | Culm/leaf | RM204 | RM217 |
| Osa06LNT0330100.1 | 6 | alk6-1 | Physiological trait | Eating quality | RM190 | RM253 |
| Osa06LNT0330100.1 | 6 | hr6 | Physiological trait | Eating quality | RM190 | RM253 |
| Osa06LNT0330100.1 | 6 | d4 | Morphological trait | Dwarf | nan | nan |
| Osa06LNT0330100.1 | 6 | Qbph6 | Resistance or Tolerance | Insect resistance | RM510 | RM314 |
| Osa06LNT0330100.1 | 6 | AsTol | Resistance or Tolerance | Other soil stress tolerance | RZ516 | RG213 |
| Osa06LNT0330100.1 | 6 | Lhd1(t) | Physiological trait | Flowering | nan | nan |
| Osa06LNT0330100.1 | 6 | nan | Morphological trait | Seed | RG138 | RZ398 |
| Osa06LNT0330100.1 | 6 | nan | Morphological trait | Panicle/flower | RG138 | RZ398 |
| Osa06LNT0330100.1 | 6 | nan | Physiological trait | Source activity | RG138 | RZ398 |
| Osa06LNT0330100.1 | 6 | En-Se1 | Physiological trait | Flowering | nan | nan |
| Osa06LNT0330100.1 | 6 | nan | Morphological trait | Panicle/flower | RG138 | RZ398 |
| Osa06LNT0330100.1 | 6 | nan | Physiological trait | Source activity | RG138 | RZ398 |
| Osa06LNT0330100.1 | 6 | nan | Morphological trait | Seed | RG138 | RZ398 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)