© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0030200.1
GACAAGAGCAAAGAACAACAAAAATATCTTCAGCACTTCCAGTTGCCCAAAGAATAAAGGGCAACCTGTCTGACTACTTCGATGAGTATTTCAGAACTTTATATGATACATGAGATGATGAGAAAAAAAATATCTGGCAACAGTTCCCTTTCTGCCACAGTTCAAAGCTAGAATATACGCAAGCTTTACATCTACTGGCATTACTATTTTTAATCAAAATTACAAACAAAATGGAAGGCGACGGCGGTTATGGTTGCGAATGTAGCGGATCAGATCATCGCTATTGTTCTTGTGGTAAATAATTGCATTACTCAGTTGCTTGATAGCTTCTCTTTTCTCTTGCACCCTAGCTGATATCTCTTCTTCTTTCTCGTCAATTGTCTTCTCAAGGTGAGCCATCTTCTTCTTCGCCTCGGAAGCACTTCTCACCATTTCTGACAAAACGTTTTCTTTCTCTCTCAACCTCATACCTAGCACATCATTCTTCTTGACCAATTCTTTCTGTTCAGCAAGATGGTGCTGTAACCTGTTCCTTAAGAGCTTGAGCTCTTCACTGCATGCAAATGAACGGGCAGAGAAGTGGGAAAAACTCTTATTGAAATGTGATTCTAGCTGATCCAATTGATCAACCAGTGTGGAGGTTCCGGACTCAGCATTTCCTTTTATTTGTACGAGAGTTTCTTCCAGTGAGTTGATCTGTCCAGAATATTTCTGTATTTTCTGTTCAAGATACTGGATCTCTCTATGTGATTTTTCCACTGCCATCACATAGCTGTCTTCTTTGCTTTTGCTTTCTGCCTCAGTAACTCTAAGCTTCTGCCTGGCTAGCTGGAGCTGAGCTTCAAGTTCTTGGACATGATTTTGTAGCTTTCTGTTCTCTTTGTTTGCAGATGTATTTTCCTCCCCTAAATGACGATGTTTCTCCATAATTTCTGTGTGTTTGTTCTCCAATGTATCTATCTGCACGAGGTGATTCCTCCTAAGTACCTCAAGGTGTGATGCCTTTGTGGATACCTCTCCATATGCATACTGGAGTCTCTGGCAGCTGCCAATAATTCCTCTGAGGCTCTGCTGGAGGCAAGCAATTGCTATCTCACGATCTGTAATTTTTTGCTTTACTTGATCTTCGAAATCTTTCATAAATGACATTTTCTCCATGCATGCTTCGGTAATAATTTTCATATGCTCCTCCACTTTGTTCTTCTGAGAAGATAATAGAACAATTGTATTTACCAAATCTTTTGTGTTAGTTTCCATGTCATTAATTTTACTGGCAGTCTCAGCTTGAACTGTCTCGAGCTCCTCAGTTAAGTTTGACACTTTCAATATTGCCTCCTCCAATTGCTTGTTCAAGCTGGAATTGCTTTCCATCTGAACTGATAGTTCCTCCTTCAGCTGTGCCAACTCACTTTCAAGATTCTTGATAGAATCCTCTGACTTCTCTAGTTGTGTTAGTGTGGCATCCTTCTCTTCATGTGCCATCTTAACCTCCTCCTGCAGCTCAATCTTGATTACTTCGAATTGCTCAGTCAAGGTACAATTGTTCTTCTTTAAGTTATCATTAGCGTGCTGTAGAGTTGAAAGGTTCTCTGTTTGCTTTTCTAGCACCGTCTCCAAGTTCCTCGCAGAAGCCAGAGATTGCTGTAACTCTAATTGAGCTGCATCCTTCTCTTCATGTAGAGCTGCAATCTCAGCATGCAGACTAGTCCTTATCTCCTCCAATTGCTGGTTCAGTCTATAATTGTTATCCTTCATTTCTTCATTAGATAGATCCAAGATTGAAATTTTCTCTCTTCCTTGCTCTAACTCCATTCTGAAGTTCTCGATAGAGATTTCAGACTGCTGCAAGTCTGACAGTGCTTTGTTCTTCTGTTCTTGTAGTGCTAAAATTTCAGCATGAGAACTAACCTTGGTGTCTTCAAGTTCCTTCTCCAGGTTAGCGATGCTCTTGTGCAGATCGTCATTAGCAAGCTGAAGAATAGAATTATGTTCTCTCTGTTTCTCTAATTCCTCTTCAAATGTCTTAATTGAAGTGTTTGACTGCTGCAAATTATCAAGTGCTCGTTCCTTTTCTCCTTGTAGCTTAATGATCTCGTCCTGCAGCTTACTTCTAGCCTCTTCTAGTTGCCTCTCCAAACTAGAAATTTTCTCTCGTAATTCTTCATTTGCTTGCTCTAGAGCTGAAACTTGGCTCTGTTTCTGTTCCAACTCACTTTCAAGATTCTTCAGATTAGCCTCCAGCTGTTGTACCTGTAGGAGTGCTGCATTTTTCTCCTCTTGGCATACTGTAAGCTCATTATACATATCAGTCTTCGCTGCTTCAAGGTTTTCAACAGCTTCCTGAAGATTTGAAATTTGTTGGTTTTGCTCTTCTAACTTGTTACCGAGCTCAACAGTAGAAGCAACAGCTTCATTCTTCTGTTCTTGTACCATTGCAAGCTCATTTTGTAAATTGGAATTTGCCAACTCCAATTCTTCATTATTCTTCTGCATAACTGAAATCTGCTCAAATTTCTGTTCCAAGTCATTACCAAGATTCTTAAAAGAAGCTTCTAGCTGTTGGAGCTCTGATGCCAGAGAGCTTCCCTCTTTTTGCAGCACTGCAATTTTATCATTCAAATCACCATTTGTTGATTCTAGTTCCTTAACACTTGACTGTGCCTTCTCCAACTCAGTTAGGCACTTGGAATGTTCGGATACTAGCATTTCCTTTTCTTCTGCTGCAGCTCCACGTTCTATGTTCATACTGTTCATTAGCTCCTCTTTCTCTGCAATCAGACCATCTATCTCCACGCCTAAAAGTTTAAGTTTGCTCTCAAGTAAATGTTTTTCTTCAGTCAAGGTGCTATTTTCAGCTTTTGTTTTAGCAATAGTTGCCTTCAGTTGAGAACATTCAGTACCTAAATTCTGCTCACATGCTTTCAGGTTATCATTCTCCCTTGAGAGCATCAAATTCTCATTCTTCATCTTCTCAATCTCTGATAACAAGGTCTGCACTTCTTTCTCAGCTAGCTGGGCCTTCTCGAGTTGGGATGACAAGAAGGTGCATTTCTCTTGGTGTACTGTAACCTCATTATACATATTGGTCTTTGCCGCTTCAAGGTTTTCCACGGCTTCCTGCAGATTTGAAATTTGTTGGTTTTTCTCTTCTAACTTATTACCGAGCTCAAGAGTAGAAGCAACAGCTTCATTCTTTTGTCCTTGTACTGTTGCAAGATCATTTTGTAAATTGGAATTCACCAACTCCAAGTCTTCATTATTCTTATGCATAATAGAAATCCTCTCAAGTTCCTGTTCCAAGTCATTACCAAGATTCTCAAAAGAAGCTTCTAGCTGCTGTAGCTCTGATGACAGAGAATTTTTTTCGTTTTGCAGCACTGCTATTTTATCGTTCAAATCACCATTTGTTGATTCTAGTTCCTTAACACTTGACTGTGCCTTCTCCAACTCAGTTAGGCACTTGGAATGTTTGGATACTAGCATTTCCTTTTCTTCTGCTGCAGCTCCACGTTCTATGTTCATACTGTTCATTAGCTCCTCTTTCTCTGCAATCAGATCATCTATCTCCACGCCTAAAAGTTTAAGTTTGCTCTCAAGTAAATGTTTTTCTTCAGTCAAGGTGCTATTTTCAGCTTTTGTTTCAGCAATAGTTGCCTTCAGCTGAGAACATTCAGTACCTAAATTCTGCTCACATGCTTTCAGGTTATCATTCTCCCTTGAGAGCATCAAATTCTCATTCTTTATCTTCTCAATCTCTGATAACAAGGTCTGCACTTCTTTCTCAGCTAGCTGGGCCTTCTCGAGTTGGGATGACAAGAAGGTGCATTTCTCATTTGTTTCTTGTAGCTGATTGCTCAAATCCCCATTCATGTTCTCCAGATCTACTATTGAAATCTTCAGGTCATCTCTCTCTTTTTCAGTAACTTGCTTCTCAACAGACAGTGTCCTAATCTCATTCTCCATGAGTGTTATTGTTTTGTGTGATTCTCCTGCCTCTCTCTCTGTAGTTTCAACCAATAACTTTAGATTTTCATTCTCAGATGACAAATTTGCAACATCCGAACTTAACTCTACCCTTGTAGCTTCTTTATCCTTGATTGCTTTATCCAGTAGGTGCTTCAGATCAGATATTTCCTTTGCTTGTTCTTCTGTGTTTTGTTTCAGCTTCTCAATTTCTGCTTCCAGACTTTCTTCTTTGGCTTCACGATCTTCAACAAGCTTCTGTTTCCAGCCATTTTCTTCACTAAGTGCATCTTCTACCTTTGTCTTAAGATTATTATTGTCTGAGCTGTCTCCCTCGTCGTCTGAATCAGATGAATCCGAATCACTGGAACTGTGCCCAACATTTTCTAGTTTACCAATTAGCTGTTGGTAGTGCTTGTGAAGGTACTCATACTCTTCATGGAAGCCCTTCACAAGGGAGGACAGTTTTGATTTCTTGAAGGCATTTCCAGAATCATCTGAGGGTTCAGTCTTGGCCGATTCATTCTCCTCGCCTATCATCCGTAGAATGTTTTCCACATTATCATCAACACCTTTTTTGTTCTCCAGAAGATGTTTGGATTTCCTAAGTTTGTGTTTCTTCGTCATGTCGAACTGCTGAATATTCTTATAATGGCAACAAATGGTATTTGCTTGCAGAGGAGATGATCTAGTCAAAATTGATCATACTTGAGGTGATATGATGCTCTAGCCTCTAACTCCAGATTATGTTTTATTCGTGAACGAGAGAAGCCCCTGAGTGAACAAACGAAATGCCTCCTCCTCTCTGTCCACAACCGCTCCTTGAATCTGAGCTGAGATCTGCCTGAAGGATGAACCGCTCGTTTGTCTTGATGAAGCCAAATAAAAGCTAAAGATTGCAGTGGCGGCGGCGGCGGCGGCGGCACGCTGATCGCTGCCTACTTCTACTGGTGGAGTAGACTCTAATGTGTGGGCAGGAATTAGAAAACG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0030200.1 | 1 | 26702571 | T | C |
| Osa01LNT0030200.1 | 1 | 26702309 | C | T |
| Osa01LNT0030200.1 | 1 | 26699334 | A | G |
| Osa01LNT0030200.1 | 1 | 26704172 | G | T |
| Osa01LNT0030200.1 | 1 | 26699659 | A | C |
| Osa01LNT0030200.1 | 1 | 26699901 | T | A |
| Osa01LNT0030200.1 | 1 | 26700234 | G | T |
| Osa01LNT0030200.1 | 1 | 26700772 | A | G |
| Osa01LNT0030200.1 | 1 | 26701078 | A | G |
| Osa01LNT0030200.1 | 1 | 26701198 | A | G |
| Osa01LNT0030200.1 | 1 | 26701979 | A | G |
| Osa01LNT0030200.1 | 1 | 26704824 | A | G |
| Osa01LNT0030200.1 | 1 | 26705236 | C | G |
| Osa01LNT0030200.1 | 1 | 26705442 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0030200.1 | osa-miR1437b-5p | Cleavage | 5.0 | 13.826 | 1 | 21 |
| Osa01LNT0030200.1 | osa-miR168a-5p | Cleavage | 5.0 | 14.558 | 1 | 21 |
| Osa01LNT0030200.1 | osa-miR169i-5p.2 | Cleavage | 4.5 | 19.58 | 1 | 22 |
| Osa01LNT0030200.1 | osa-miR166g-5p | Cleavage | 4.5 | 7.564 | 1 | 21 |
| Osa01LNT0030200.1 | osa-miR166g-5p | Translation | 5.0 | 13.907 | 1 | 21 |
| Osa01LNT0030200.1 | osa-miR172d-5p | Translation | 4.5 | 12.644 | 1 | 20 |
| Osa01LNT0030200.1 | osa-miR1426 | Translation | 3.0 | 10.938 | 1 | 21 |
| Osa01LNT0030200.1 | osa-miR1426 | Translation | 4.5 | 13.406 | 1 | 21 |
| Osa01LNT0030200.1 | osa-miR1426 | Translation | 4.5 | 14.442 | 1 | 21 |
| Osa01LNT0030200.1 | osa-miR1426 | Translation | 5.0 | 10.471 | 1 | 21 |
| Osa01LNT0030200.1 | osa-miR1853-5p | Cleavage | 4.0 | 17.067 | 1 | 24 |
| Osa01LNT0030200.1 | osa-miR1853-5p | Cleavage | 5.0 | 13.455 | 1 | 24 |
| Osa01LNT0030200.1 | osa-miR1853-5p | Cleavage | 5.0 | 16.971 | 1 | 24 |
| Osa01LNT0030200.1 | osa-miR1861d | Cleavage | 5.0 | 9.219 | 1 | 22 |
| Osa01LNT0030200.1 | osa-miR1861h | Cleavage | 5.0 | 9.219 | 1 | 22 |
| Osa01LNT0030200.1 | osa-miR1861j | Cleavage | 5.0 | 9.219 | 1 | 22 |
| Osa01LNT0030200.1 | osa-miR1869 | Cleavage | 4.5 | 18.716 | 1 | 24 |
| Osa01LNT0030200.1 | osa-miR2055 | Cleavage | 4.5 | 13.401 | 1 | 21 |
| Osa01LNT0030200.1 | osa-miR2095-5p | Translation | 4.5 | 15.858 | 1 | 22 |
| Osa01LNT0030200.1 | osa-miR2095-5p | Cleavage | 4.0 | 9.803 | 1 | 22 |
| Osa01LNT0030200.1 | osa-miR2106 | Cleavage | 5.0 | 19.4 | 1 | 21 |
| Osa01LNT0030200.1 | osa-miR2870 | Translation | 4.5 | 12.083 | 1 | 21 |
| Osa01LNT0030200.1 | osa-miR2870 | Translation | 4.5 | 12.791 | 1 | 21 |
| Osa01LNT0030200.1 | osa-miR2870 | Translation | 5.0 | 17.73 | 1 | 21 |
| Osa01LNT0030200.1 | osa-miR3979-3p | Cleavage | 5.0 | 12.33 | 1 | 20 |
| Osa01LNT0030200.1 | osa-miR3979-3p | Cleavage | 4.5 | 12.022 | 1 | 20 |
| Osa01LNT0030200.1 | osa-miR5151 | Cleavage | 4.0 | 9.982 | 1 | 22 |
| Osa01LNT0030200.1 | osa-miR5339 | Cleavage | 3.5 | 20.168 | 1 | 21 |
| Osa01LNT0030200.1 | osa-miR5491 | Cleavage | 4.5 | 10.397 | 1 | 21 |
| Osa01LNT0030200.1 | osa-miR5507 | Translation | 5.0 | 8.401 | 1 | 21 |
| Osa01LNT0030200.1 | osa-miR5523 | Cleavage | 4.5 | 12.995 | 1 | 22 |
| Osa01LNT0030200.1 | osa-miR160f-3p | Translation | 4.5 | 19.708 | 1 | 21 |
| Osa01LNT0030200.1 | osa-miR1426 | Translation | 3.0 | 7.718 | 1 | 21 |
| Osa01LNT0030200.1 | osa-miR1432-5p | Cleavage | 4.5 | 19.02 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0030200.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0030200.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0030200.1 | 1 | yld1.1 | Physiological trait | Source activity | RM5 | RG462 |
| Osa01LNT0030200.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0030200.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0030200.1 | 1 | QPh1b | Resistance or Tolerance | Submergency tolerance | RZ527 | RZ154 |
| Osa01LNT0030200.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0030200.1 | 1 | nan | Morphological trait | Seed | CDO118 | CDO455 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)