© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0330500.1
GAGATGCTCAATGCATGAAATATTTTCTTTATCAGAACATGAGAACACCTGAATATCACACAGCTTGTGTGCCTAAGTATAATCATAAATTTCTATTATACAAAAGCAGCAATTTCTGTTATTACATTCTCGTTTTCTTGCTTTAGCTCATCAGCCTAATACTAGCAGCACCAGCATCGCATTACAAACTCAACAAAAAGCACCTCTCTCATTCCTGAACCTCATAGCTGAAATAACAGTGTAGAGCACCAATACTCATAACTGAATACAGTGGATCCAAGAATATCATCAAACAAGATCTCGATCTCATGCTACATCAATGTGAATTCCGGAAAAGCCTTTCTCAGTGAGCAGAGCTCCTCGGCTGGCTGAAGGATCCACCAGCATAGAGCATCTGATATACTGGTCGGATTCTCACTGTCAAAACAATGCTCAGCAATGTACCCAAGCTAGCCACTCCAGCTAGAACGCAAAATGTAAGTCTGAAACAATTAGGGCCATGGCATGCAATGTCAGTGTCCATTGTTGTGGCATGCTGTCTCTCCACTTCCTGGTCGTAAACATACCCCGCGAGACTGTTAAACAAGAGTGCGCCAAGTGGGTTCCCCAAGGAGATGAAATTGAAAATCTTTCCGAAGTGCTTCAATCCAAACAACTCAGATGAAGTTGACACCATCACTGAGAACTGGGCACCATAACAAATACCAAGTAAAGCAACAGAGACATGAAGTGTGGCATGGTGGCCCAATGCAAAGAGCAGGTATATAATTATCATCATGACTTGGGTGCATGTAATCAATGTTGTCCGTGGAAGGGTCCTTGACCTGACAAGATACTCAGAAACAGCACCACCTCCTAAACGGCCAAAGAAATTGCCGAAACTGAAGAGGGCGAGTGATATGGTTGTATCCGCAACACCTGCTGCAATTCCAACTTGTGCTAGATTATTAAGAACAGTGACTCCAGATCCAACCCCAATAAAATACACTGCAAATAAAAGCCAGAAATCAGCCTTCAGCAGTGCTTCACGAAATCTAAAGTCCTCTCCCCTTTTTGGTCTTCTTCTCTTCTGCTTTATAGCCCCTTCTCCCTCAGCTAAGAGAATATCAATATCCATGGAATCATCATCTTCTATATTACCAAGATTTGATGCTGATGAAGAAGGAAGTAATGATTCTGTATGATCATGATCAGCAGAAGAAGAAGAGCACTCTGATGAATCGGATTGCCCTTTTCTTCGGTTGCTTGGAAACAATGTCATTTTCAAGGGTACTGTAAGTGGAACAAAGAGGACAAGGACCATGATGACAAGCAGAACATAGTTCACAGCATCAGTAAGAGTTACGAAATGGTCCAATATCGTGGCTGCAACAAGATAAACCCCTAGAAGAACACTGGAGAGTTGTGTGAACAGAAAATGCACTTGCTCCGAAGAGTTCTCCACAAGGGAGGGTTCACAAGGCCGCACGAAGTACATTGTCACAAGGCACACAACAGGAACTCCCAGGGTGACAAAAAGCAGAAAGTTTGAAGCTGAATCATGAAGTACTCCGGTGTATATTACAGTGTACACAGCAGCACTTAAACCAGCGTACCCTTTAAGGATGCCAGCGACGGCACCTCTACTGAGTGGGAAATTCCTCATATTGGTTACCAAAACAGCGGTCCCCAACCATGCACCACTGTTTGCAGCAAGGCATAAGGCAAACCATATCTGAAATACAACAGTACGGTCACTAGTCAGTTTAAGCTGTCCTACGAAATTAAATCTCGGCGTCTCACCATCAGAAGAAGCTAGCAGCCTAGCAAAGTAAGCTAACCCCAGAAACCTGCCCCAGAACAAGCTTCCAGTAAAAATCCCCAATATGTGCATCTTGCTGGCGTGTGAAGCCAAATGTCGCATTTTTTTCCAACCCAAATGTGAATGTGACCCATACTTGTTCGCTAGTTAGTGTTTGGTACAACAATTCTTATTTTGTAGTTTACTTTTTGTTGCTGGGATCTTTGAAAATGACTCCTTTTGTTCCCGGGAACAGGTTCCTTGCTATATCTAACTCAAAAAGTCGTTACTTGCACCGCCCAAAAGTGGCCACTTGGCGTAAAAGAAGCGCACTACCAATACACTAGAGCAATTCGACTCCAATTTCACAACCTAACGAAAATGCACCACTAATGCGCATCCAAATGCAATTTTCTAAAACTAAAATTACAAGAAAAAAAATACAGTGCGAATCGATCTCAGAAGTGGACACCTAGCAACAACAGATCCAAGAAAAGAAAAAAGGTAAAAAAAAAAAAGGAAATTACAGAGCAGAGAGAAGGGTAGAGAGAGATGACCAGCCAGTAGGGGAGCGCGGGGCCGGAGGCGGAGACGGCGAGCCAGGTGGAGCCGTAGCCGAGGAGGCATGCGGCGGCGCCGACGAGGAGCAGCAGGGCGGGGTGGAGGCGGTTGCAGAGGACGCCCGGGAGGAGGCCGAGGTTCTCCCCGACGTCGCAGGCGACCCCGAGCAGCGCGAGGCGGCGCTGGTCGGCGGCGAGCGCGACCTTGAGGGCGTGGGAGTAGAGCGCGAAGGTGGAGCTGGCTCCGCCCGCCACCTGCACCCACACCGCCGCCCCTAGCCCCACCCACGGCGGCCTGCTCCCCGCCTTCACCGCCACCGCCCCCCTCATCCTCCCCTCCTCCTTCCCTGGTCGGATCGAGAAGCGGGGTTTGATCAGCAGCAGCGAAGCGTGGTGGGAGCGAGAGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0330500.1 | 6 | 3934164 | C | T |
| Osa06LNT0330500.1 | 6 | 3934174 | G | T |
| Osa06LNT0330500.1 | 6 | 3934598 | T | G |
| Osa06LNT0330500.1 | 6 | 3934965 | T | C |
| Osa06LNT0330500.1 | 6 | 3935912 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0330500.1 | osa-miR172c | Translation | 4.5 | 14.766 | 1 | 21 |
| Osa06LNT0330500.1 | osa-miR415 | Cleavage | 4.5 | 10.46 | 1 | 21 |
| Osa06LNT0330500.1 | osa-miR1426 | Cleavage | 5.0 | 12.22 | 1 | 21 |
| Osa06LNT0330500.1 | osa-miR1862a | Translation | 4.5 | 15.883 | 1 | 24 |
| Osa06LNT0330500.1 | osa-miR1862b | Translation | 4.5 | 15.883 | 1 | 24 |
| Osa06LNT0330500.1 | osa-miR1862c | Translation | 4.5 | 15.883 | 1 | 24 |
| Osa06LNT0330500.1 | osa-miR2863a | Cleavage | 5.0 | 13.893 | 1 | 21 |
| Osa06LNT0330500.1 | osa-miR2865 | Cleavage | 5.0 | 21.04 | 1 | 22 |
| Osa06LNT0330500.1 | osa-miR2868 | Cleavage | 3.0 | 9.004 | 1 | 20 |
| Osa06LNT0330500.1 | osa-miR1862f | Cleavage | 4.0 | 13.931 | 1 | 20 |
| Osa06LNT0330500.1 | osa-miR1862f | Translation | 5.0 | 15.883 | 1 | 20 |
| Osa06LNT0330500.1 | osa-miR1862g | Cleavage | 4.0 | 13.931 | 1 | 20 |
| Osa06LNT0330500.1 | osa-miR1862g | Translation | 5.0 | 15.883 | 1 | 20 |
| Osa06LNT0330500.1 | osa-miR5489 | Translation | 5.0 | 18.569 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0330500.1 | 6 | Qbph6 | Resistance or Tolerance | Insect resistance | RM510 | RM314 |
| Osa06LNT0330500.1 | 6 | AsTol | Resistance or Tolerance | Other soil stress tolerance | RZ516 | RG213 |
| Osa06LNT0330500.1 | 6 | Lhd1(t) | Physiological trait | Flowering | nan | nan |
| Osa06LNT0330500.1 | 6 | nan | Morphological trait | Seed | RG138 | RZ398 |
| Osa06LNT0330500.1 | 6 | nan | Morphological trait | Panicle/flower | RG138 | RZ398 |
| Osa06LNT0330500.1 | 6 | nan | Physiological trait | Source activity | RG138 | RZ398 |
| Osa06LNT0330500.1 | 6 | qSLL-6 | Morphological trait | Culm/leaf | RM204 | RM217 |
| Osa06LNT0330500.1 | 6 | nan | Morphological trait | Panicle/flower | RG138 | RZ398 |
| Osa06LNT0330500.1 | 6 | nan | Physiological trait | Source activity | RG138 | RZ398 |
| Osa06LNT0330500.1 | 6 | nan | Morphological trait | Seed | RG138 | RZ398 |
| Osa06LNT0330500.1 | 6 | qTLL-6 | Morphological trait | Culm/leaf | RM204 | RM217 |
| Osa06LNT0330500.1 | 6 | qTLWR-6 | Morphological trait | Culm/leaf | RM204 | RM217 |
| Osa06LNT0330500.1 | 6 | hr6 | Physiological trait | Eating quality | RM190 | RM253 |
| Osa06LNT0330500.1 | 6 | alk6-1 | Physiological trait | Eating quality | RM190 | RM253 |
| Osa06LNT0330500.1 | 6 | d4 | Morphological trait | Dwarf | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)