© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0331000.1
GTCGTGTATTAAAAACGGAGGTAGTATGTACTGTAGGTTGTGCCCCACATCCACACCGATGAAAGTTCATGCGAGGGCATTGACTAGGCGATGTGTTGTGTGTCCACACTGAATTTTTCAAAGCCTAAAGTTTTACAGGATGTCAAAACAGATCGAGTAGTACTAAACAACATAGGTGTGCCCACGCACCCACACTTGATGAAAGTTAAGGATTGGGCATTGACTGGACAACTTGAAATGTTATTTACATTTTTACATAAGCCAGAAGTAAAAAGGTTATTTGAGTGGAAGGTGAATTGGTCATGGAGATCTAAAGGTCAAACATGCATGCCAAATACTTGATAGCAACAGGCATTGGAAATATCTAAGACAGCAGAAAAAGGCAAGCATAAGTTAATTACGGCATAGTGATTATGGCCTTAATGGACAATCGACATAGCTAAATGTGGTTCAAGCATGTGTCCTATGATCCTATCAAAGTTTAATTATAAAACTTCTATAGAAAACAAAATTACTTAGGTTGCTGGTTGCATGCTTCGGTCATGTTATTGACAGTACATTTCAGCTTGCACATATTCATATTATCATAACACTATCAGACATGAAAAGGGAAAAGTATCAAATGTACAACCTAGCCATTCTAAAGTATACTGCTGATCAAGCTAAAATAAAATTTCATGGCTTAACATAGGTTCATCAGGGTGGATATCAAACATAGTGCACAAAACTAATGCTTCGTGCTACAATAACTCCATCCTTCAAAGTGAAAATCTTGGTTGGAAAGACATCACCAATCGAAAAAGCCTTTCCAAAAGGCGCAACTAATAGCAGACGACAAGTAAAAGAACAAAAAAGGAGGCTTCCTGAAAGATAAAAGGGCAAGAATGTGGCTTGGCTTTCTTTTTTAGTGGAGGATGATGCATGTTTCATTAAGTGGTAACACTAAAACCTGAAAAAAAAATGACATGAACAAGCACATATAGAAGGATAAGGTATGCAAACCTTGTGTGATGGACTATCTCCTACAGGTTTTCTGGAAATGGCTGCAAAAATATAGAGGTGTTCATCTTTTGTGATCTTGGTAATATATAATTGTAGCCAAAATATGTTACACATCACTGTAAAAATCTTGAACACTGGGCATTGGGCTCCCAGCCAAGAATGATTTGATGAGAATTAGAGCCTGTTTGGGCCTATGCAGAGGAACCTCATGACCTGCGCCCCTCACAGTCACGAAGTTGAGTCCCTTGTACCCTTGAGTCCAGCCACCAACCTCACCATCATCGTCATACCAAGCATTCCAAGGGGTTACCGTTGGAAGTTTGAGGGCATTGATGCTGTATCTAGTTGATGTTACTGGAAGCACTGCATCTGTATCTCCACTGAACACCCATATACGAAGACCATACTGTATAAGTTCATGATAGATATGCAGCACAGATCTTTCGCAGTCCTTCCAGTTAGTGTTAACAACATCACTGCAGGTTTCCCATTTAGATTTGTTGATGATCGGACTAACATGAAGTGCCTTTTGCACCTCAGCCAGATTGAAGTATACAGTTGAATGCTTTTCAGTGCATGGATCATACCGCTCTCCCATTTTCCCAACAGAATGTAACCTTTTCATGACTTTGTTCCTTGAGGAGGCAAAAGATGCATGGCAAGTAGGTGTGAAGATGCTATACGAATCGATATTCCCAGCTTCGTCACTAGCAATGTCAAGAATCTTATTACACTGTGAAGATGTATGCACAAAGGACTCGTAGTCACAGAAAACATTCAGTAGCCTGTATGTTTGATCAGAAATCAAGCCATTGGTCCACATGAATTGAAATATGCCAAGGTGATCGTGGAAATCATCGAACAGAGCATTTCCTGCCATATAGCCCTTTAGATTGATCGATTTGTCTCCAGTGGCTTCATGGTGCCTCTTTATAGCTTGTGCTAATTGAGGAACATAGTGGCCAGCATAACTCTCTCCTGTCACGTAGAACTCACGCCCCTTATACTGAGGAAATCGTTCAATCCACTTTGTTAAGAACGTCAAAGAATCATTGGCAGTCCTGGCATCCCCATTATTTAATATATCATCAGAGGCGTTTGAGTACGAATAACCAACACCAACTGGTGAATCAAGGAACAAGATATTTGCCACTTGGTTCCACGAATAGGGATTCAGATGTACACCCTGTCCATCTGCATTAACATGAAAAGGTCCCACTTCTTCCGCAACGCCATATGCAATTGATGAGCAACCTGGCCCTCCGTTGAGCCAGAGCACGAGGGGCTTGGACGCCGGGTCGTCGGCGGCCTCGAAGAACCAGTAGAAGAGCGAGGCGCCGCGCTCCTCGCTGACGGCGACGTACCCGGCGTACTGCGCGAACCCGACGTCGAAGTCCTGCCCGGGCACCCGCGCCACCCGGTCCCGCTCCTGCTCCGCCCGCCACGCCTCCCCTCCGCCGCCGCCGCCGCCCACGGAGGCGGAGCACACCCCTCCCACCACCACCACAAGCAGGAGCACGAGGAGGGAGCCGATGGCGCTCGTCGTCGTCGTCGTCGTCATCGCGGCGATCTCGGAGAAAGTGGCTTGCGTGCTACCAA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0331000.1 | 6 | 4345912 | A | T |
| Osa06LNT0331000.1 | 6 | 4346113 | G | A |
| Osa06LNT0331000.1 | 6 | 4346402 | G | A |
| Osa06LNT0331000.1 | 6 | 4347305 | T | C |
| Osa06LNT0331000.1 | 6 | 4348768 | T | C |
| Osa06LNT0331000.1 | 6 | 4349219 | C | G |
| Osa06LNT0331000.1 | 6 | 4349464 | A | G |
| Osa06LNT0331000.1 | 6 | 4350087 | A | G |
| Osa06LNT0331000.1 | 6 | 4350809 | C | T |
| Osa06LNT0331000.1 | 6 | 4351345 | G | A |
| Osa06LNT0331000.1 | 6 | 4351431 | A | G |
| Osa06LNT0331000.1 | 6 | 4352848 | A | C |
| Osa06LNT0331000.1 | 6 | 4348522 | A | G |
| Osa06LNT0331000.1 | 6 | 4346205 | A | G |
| Osa06LNT0331000.1 | 6 | 4347737 | T | C |
| Osa06LNT0331000.1 | 6 | 4351700 | T | C |
| Osa06LNT0331000.1 | 6 | 4351705 | C | A |
| Osa06LNT0331000.1 | 6 | 4351883 | C | T |
| Transcript ID | Transposon ID | Chromosome | Strand | Start | End | Counts |
|---|---|---|---|---|---|---|
| Osa06LNT0331000.1 | DTM_#DNAt_MULE_japo_Os0360 | Chr6 | - | 4351500 | 4352211 | 711 |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0331000.1 | osa-miR7694-3p | Translation | 5.0 | 21.617 | 1 | 22 |
| Osa06LNT0331000.1 | osa-miR319a-3p.2-3p | Cleavage | 5.0 | 10.83 | 1 | 20 |
| Osa06LNT0331000.1 | osa-miR319b | Cleavage | 5.0 | 10.83 | 1 | 20 |
| Osa06LNT0331000.1 | osa-miR816 | Cleavage | 3.5 | 14.702 | 1 | 20 |
| Osa06LNT0331000.1 | osa-miR2093-5p | Cleavage | 5.0 | 19.725 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0331000.1 | 6 | nan | Morphological trait | Seed | nan | nan |
| Osa06LNT0331000.1 | 6 | nan | Morphological trait | Seed | nan | nan |
| Osa06LNT0331000.1 | 6 | Qbph6 | Resistance or Tolerance | Insect resistance | RM510 | RM314 |
| Osa06LNT0331000.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0331000.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0331000.1 | 6 | AsTol | Resistance or Tolerance | Other soil stress tolerance | RZ516 | RG213 |
| Osa06LNT0331000.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0331000.1 | 6 | qNP-6 | Morphological trait | Culm/leaf | RZ450 | RZ588 |
| Osa06LNT0331000.1 | 6 | nan | Morphological trait | Panicle/flower | RG138 | RZ398 |
| Osa06LNT0331000.1 | 6 | nan | Physiological trait | Source activity | RG138 | RZ398 |
| Osa06LNT0331000.1 | 6 | nan | Morphological trait | Seed | RG138 | RZ398 |
| Osa06LNT0331000.1 | 6 | qRCRJ-6 | Physiological trait | Source activity | RM217 | RM402 |
| Osa06LNT0331000.1 | 6 | Lhd1(t) | Physiological trait | Flowering | nan | nan |
| Osa06LNT0331000.1 | 6 | nan | Morphological trait | Seed | RG138 | RZ398 |
| Osa06LNT0331000.1 | 6 | nan | Morphological trait | Panicle/flower | RG138 | RZ398 |
| Osa06LNT0331000.1 | 6 | nan | Physiological trait | Source activity | RG138 | RZ398 |
| Osa06LNT0331000.1 | 6 | qLW-6 | Morphological trait | Seed | RM217 | RM111 |
| Osa06LNT0331000.1 | 6 | alk6-1 | Physiological trait | Eating quality | RM190 | RM253 |
| Osa06LNT0331000.1 | 6 | qSPTF6 | Physiological trait | Sterility | RM217 | RM111 |
| Osa06LNT0331000.1 | 6 | hr6 | Physiological trait | Eating quality | RM190 | RM253 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)