© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0331800.1
AGAGCATCGGTACAGTAGAACAGGACTGGAATATAAGTATAACAAAGTCACAATTATAAGATATTGATGGTAGTGAGTACCATTCGACGAAATTAAACCACTCTATTAATACTAGCCAAACCATATATAATGTAGCATAAAGCTGAAACATAAGCTAACAAAATTATGTCTCAGTCGAAGGATGAGACGCGATACAACACCAATCCACCAGACAGTATGAATAACGGCGTAGAACAAGTCCTAAAGATTGGATAAACAGGCCTTCCTTCACCCTAATCCCAACACCGAACTGCAATTATACTGAAACCAGTGATGCTAAGCAGCAGTGCTGAATTACTTATCGCCTGCTCGTCTTGCCAATAGAACGTTTTCCAGAGAATAGATGCTTTGGTTTCAAAGTTGGAATGACACGATCCGCCTCACCGCGACGAGCCTCCTTGTTCCTGTTCCTCACAGAATCCTTAGCTTTCTTAATCGCCTTCTTCTTCTGAGCAGAGTCCTTGAATCCTTCTCCTGGAACAACCTCCTCAGGTGGTCTTGATTTTGACCTAGACCTGGACCTCGACAACGCGCGCAATTTCTTGCTGGATTGCTGGCCATCTATATCCATATCATCACCATCACTAGCAGCTCTGCTAAGTGACCTCTCACGCTTGCGACCTCTAGAACGGCTGCGGGCTCGGTCCAGAGCTGCCCTAGGATCAAAACCCATGGATGAAAGTTGACGACCCATTCTATTAGTTGTGAATGTCCTGTCTTTGTCAAACTTTCTAGGAACAATAGGACGGCTTTCTGCAGTCCTCTTCTTCATTCTATGCTCTTGGATGAGCAATGCCTTCTTCTTTCTAATCTGACCCAAGATTTCACGCTGCTCTTCAGTTAGTTCATGGCCATCAATCTGGAAAGCTTCCTGTGCAGCTTCCTCTTCGAGGCGAAGACCCTCCTCTCTCTCCAACTCTTCACACCTCTGCAGTATATCTGGATCCAGAAAATCGGCAACATTATGCCCATCCAATATCTCAGGCAGAATATCTTCCTTCCATTCATCATCAGCCAATAAGTAATGCTTCTTGAGACTAGCAGAATAGACCCCAGCACCTCCATTCTCATTCTCGAGGTCCTTCTCCAGTTTCCTTTCCAGCTTCTTCTTTTCCTTTGCAGCAGCAGCACTTGCTCGAGCATCCAGAACAGCCTGAGGGATGCAAGCAGGCCTCTCCTTGTTATCACGAGGCTTTGGCATAGCAACATGAAACCTATTTAGGCAGTCATTGATCTTCTTTGATTTCATCTTGATCTCCACCCTTTGATCAAGAAGCCTCTCACATGCAGCATTTTTCACAGCCATCACACCCTCTTCAGTCAAAGTACTCATAGTCAACAAAACACCCTCTTCATTAGCTTCTCCACCATGACCTAGAGTCTTCATAGCCTCCGCTTTCATCTCCATTACCAGCTTCATGTCCTCCTCAGACAGATTTTCAAGAGGCTGCAAGTCCGTCTTGTTGCACACAATGACTAGAGGCTTGTTCATGAACAAGGACTTAATACTGTGGAAAAGTGCAGCTTGCTGAGCAATACTGTACCCACAAGAACCAGAGATGTCCAGGAAGAATAGCACAGCAGCCCTCAAGTGGGCAAGAGCAGTGATGCTGCACATTTCTATGATGTTCCTGTCCTCAAAAGGCCGATCAAGGATCCCTGGAGTGTCAATCACTTGGTAGCGCAAATACTTGTAATCAGCATGACCAACAAACAGAGACTTAGTTGTGAAAGCATAAGGCTGGACATCCACATCTGCTCTTGTGATCTTGTTCATGAAAGAGCTCTTCCCAACATTTGGATAGCCACAAATCAATAAAGTCCTGGTGTTTGGGTCTATAGATGGAAGCCTCGCCATGTGCTGCCTGATCTGCTCCAGGTATGCCAAACTAGGACTGATCCGCTTAATGACAGTACACATGCGACCTAGGGCAGCCACCTTCAGGCACTTGCACCGGTACAGTGAGTCTCCATACTTGAGCAGCCTCAAATAGTCCTTAGCTATCTTTGCAATGATATTTCTGGCAGTGTTGATTTGGCCCAAGGCAAGTTTGTAGTGATCTTTGTTGTACAGAACATGTAGGAGATCACCATAGAAAGGATGGATGTCATCCAGCCTTGGGAAGTCATCGATAACAGTGGACAGCTTCTCGTAGAAGTTTGACTGTGTATACTTAACCTTTCGCATATAAAACTGGCGAATGCGGGAGATAGAATATCCCTTATGGACAACAGTTGGTGTTTGCCTCTGGGTGCGGGACAAGATGATGTCAATGAAGTCCTTCCCAGGAGGGACAACAGTGATTCGTTTGAAATTGTACTGCACCATCTTCACTAGCTCAGATGACTACTCCTCGTGAGACGGCGGCGGAGGCGAGCGGGAGCAGGTGAATCAGCACCGGGATACGATGCCTTGCCTCCTGGAGGTGGTCGGCGGCGGCGGCGGCGGCGTCCCCCCTCTGCGTGGCGGCGGACGGGGGAGGGGGAAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0331800.1 | 6 | 4871589 | A | G |
| Osa06LNT0331800.1 | 6 | 4871707 | T | G |
| Osa06LNT0331800.1 | 6 | 4872070 | T | C |
| Osa06LNT0331800.1 | 6 | 4872800 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0331800.1 | osa-miR5817 | Translation | 5.0 | 17.654 | 1 | 24 |
| Osa06LNT0331800.1 | osa-miR5829 | Translation | 4.5 | 10.093 | 1 | 24 |
| Osa06LNT0331800.1 | osa-miR168a-5p | Translation | 5.0 | 24.125 | 1 | 21 |
| Osa06LNT0331800.1 | osa-miR169i-5p.2 | Translation | 3.5 | 19.496 | 1 | 22 |
| Osa06LNT0331800.1 | osa-miR169r-5p | Cleavage | 5.0 | 12.974 | 1 | 21 |
| Osa06LNT0331800.1 | osa-miR1865-5p | Cleavage | 3.0 | 17.498 | 1 | 24 |
| Osa06LNT0331800.1 | osa-miR1319b | Translation | 4.5 | 13.775 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0331800.1 | 6 | alk6-1 | Physiological trait | Eating quality | RM190 | RM253 |
| Osa06LNT0331800.1 | 6 | hr6 | Physiological trait | Eating quality | RM190 | RM253 |
| Osa06LNT0331800.1 | 6 | rrsd6b | Resistance or Tolerance | Drought tolerance | RM253 | RM314 |
| Osa06LNT0331800.1 | 6 | QGt6b | Physiological trait | Eating quality | RM253 | RM314 |
| Osa06LNT0331800.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0331800.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0331800.1 | 6 | AsTol | Resistance or Tolerance | Other soil stress tolerance | RZ516 | RG213 |
| Osa06LNT0331800.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0331800.1 | 6 | nan | Morphological trait | Seed | RG138 | RZ398 |
| Osa06LNT0331800.1 | 6 | nan | Morphological trait | Panicle/flower | RG138 | RZ398 |
| Osa06LNT0331800.1 | 6 | nan | Physiological trait | Source activity | RG138 | RZ398 |
| Osa06LNT0331800.1 | 6 | qASV6-1 | Physiological trait | Eating quality | RM111 | RM314 |
| Osa06LNT0331800.1 | 6 | nan | Morphological trait | Panicle/flower | RG138 | RZ398 |
| Osa06LNT0331800.1 | 6 | nan | Physiological trait | Source activity | RG138 | RZ398 |
| Osa06LNT0331800.1 | 6 | nan | Morphological trait | Seed | RG138 | RZ398 |
| Osa06LNT0331800.1 | 6 | qNP-6 | Morphological trait | Culm/leaf | RZ450 | RZ588 |
| Osa06LNT0331800.1 | 6 | qRCRJ-6 | Physiological trait | Source activity | RM217 | RM402 |
| Osa06LNT0331800.1 | 6 | qLW-6 | Morphological trait | Seed | RM217 | RM111 |
| Osa06LNT0331800.1 | 6 | qSPTF6 | Physiological trait | Sterility | RM217 | RM111 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)