© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0331900.1
AACACCAGGAACCGGCGTTTATTTGAGGCAAGCACTGCCCAAAATCTCGCAAAAGTACTGAAACCTTAGACATAGTACACATCCATGGCAAACATGGATGCCAAATGACAACTACAGAAAATTATCAAATTCGAATGCAGCTGACGGCTTCTCCTGCTGAAGATGCATATTTTCCCCTCCATTACTTGGATGTGCTCTCTCCATCGACAGCCAATGGGACGGCGCTGGCCAGGCTGCGGTATTTCAGAGCATAGAACATCTCAATGTAACGGCGAGTCTCGCGCCTCTCAAGGTTGCTTACGTACTTCCAGAATCCGTATACACCAGTCAAGGTCATCAGCCTCTCAGAGTACAGCTTCCAGGTGTACTTCTCGTAAATCCTCTGCAGACCTCCCTGTGAAATATTGTCCCAGTAGGTTGAATCCTGCTTGCACTTCTCAAAGAAGTTGACCAAGATATCAGCAGCCTTGTCACTGTGGTAAGGATCAATGTGCAGACCAGACACCCCATCAACAATAATCTCAGCAGGGCCACCATGGCATGTTGCGATTGTTGGCAAACCACATGTCATGGCTTCGATGACAGTCAGACCAAACGCTGGACAAAGACTCCCTTGGTGTCACAAATGTATCGGTACAACTCCCCGTTACGAACACGGTTCATCTGAGCTGAGATCCAGCGGATATGCCCCTTCAACTTGTACTGGTCAATGAGACCGTACATCTTCTTGAACTCAGCCTGCTCCTCCCTGTCCTTGGACTGATTGCCGTGGTCACCACAAACAATCACAAGGTTTGCCAAATCCCTGAGATGTGCATTCTTACCATACATCTCAACCAGACCTGTCATGTTCTTCACTCGGTCAAGACGAGCCATGGAGAAGATGATTGGCTTGTTCTTGTCCTTCAATACAAACTTGTGTTCATCGTTCTCGACTTCACTGTAGAGAAGCTCCTCAATTTCAGGGTGGAAAGCAGTGAGCCTCTTGTCAGCCTCGGTGTACGGGAAGTAGACACTCATGTCAGCTCCAGGAGAGACAATGTTGAACTTGGGATCAAAAACATCTATGCCATGCACAACTCGGTAAAGCCCAGGAAGGGTGAATGCAATGTGTGATTCATACTGCCCCACAGTGTCCTTGCTTCCAGCAATTTCTTGGAATGTACTGGTGATGATGAAATCAGTGTGATTCATGGCGATAAGATCAGCAGTGAATTGGCATGAGAAGTGGTACTGGCTGTCAAACTTGTCCAAGTATATGTCTGAGTTGGGGTATTTGGTTTTCTCCAAGGCATGAGATCAGGTTTGGCTTGCATTTCCCTCATAATTTCGTTTGCAACATCCTCAGTGTATGTTTCCAGGAATGGCCAGACATCAAAACGGGAGATCCACTTGCGGAGGATACCATTCTCACTCCTGAATGGAACACGAAGAATGTCAGTGTGCTCAGTTCCAATAACCTTCTCCACACGCTGGCCGCATGTAGTACCAACAGCATCAGGCAACAGCCTGGTTACAATGAGGATCTTAGGTGTGATATCAAGGCCTTGCTGCTTGATCCTCAAAAGCATCTCATTCTCCAAAGCGCGGACTTGGTCCAAAATGTACACAACCTGACCACCAGTATCAGGGTATCCCAACACATTGGATTGGGCAAAGTATCCATGCGGAGACAGGATAACAACATTGAACATCATTGGAATAGTTCCAAGGAACTTCTCCAAGTTGGCCGGATCAGGGGCCTCAAGAAGGTCAAGAAGCAAGTGGATGGTGTCAAGCACACGCTTTGCACAGTCACCCCAACCCTTCTCCAAACCGAGCTCTTGGAACCTGTGGTTGAACTCCGAGTAGGGCGTGTCTTGAGGAATGCCCATCAGATATTCTTCTGCCTTTCTAAGGGATGATTGGAGCCCACGAAGGCTCTGAATTCTGTCATTCAGCATCATTGTCGTGCCCTTGTGGTTATGGGCTTTCAGGAAGTTCAGCAAGGGGTAGAGGCTCTCCTTGTCCTGGAACAACTTGGACGACAGGTGACGGTTAAGGAACTGCACCCCATTTCCGATGGACTTGGACATGGACGGGCGCGGGAAGGAGGCATTGAAGGGCTCAAAATCAAGCTCAAGAACAAAGTTGCTGTTGGTGTGTCCATCAACAAGCTGTTCCTTGAATGCCAAGTACTCAGAAACACTCAGCTCTTCCACTGCCAACTCACTTACATTCACCCGAATGTAGTCCCAGACACCAGGCCTTGGCCTGATGGCCAGTGCAACCCAGGGCGGCAGCACAATGGCTTCCTGAGCAGCCCGGAGAATGTCTTCAAAGGGAGCATATTTCTCTTTGTCAGCTTCGATCAAGGCATCGAACTCCGCAAGCAGCTGGTGACGCTGGAGCATTCCCTTTCCCTGGTTAACATACCTAGAGAAGAGTGCAATCAACTCATTGGGATGAGACGAGAAGGTGGCACCGAGGCGTTCGCGGAGACTGTGGAGGCGAGCTAGCTTGGCAGCCATGACTCAATTTCAGGAACCAATGGTGGTCAGAGACGAGCAAACGAATGGA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0331900.1 | 6 | 4796988 | T | C |
| Osa06LNT0331900.1 | 6 | 4797496 | C | T |
| Osa06LNT0331900.1 | 6 | 4797499 | A | G |
| Osa06LNT0331900.1 | 6 | 4798087 | G | A |
| Osa06LNT0331900.1 | 6 | 4798299 | T | C |
| Osa06LNT0331900.1 | 6 | 4799053 | A | G |
| Osa06LNT0331900.1 | 6 | 4799302 | A | G |
| Osa06LNT0331900.1 | 6 | 4799710 | T | C |
| Osa06LNT0331900.1 | 6 | 4799711 | G | A |
| Osa06LNT0331900.1 | 6 | 4799776 | A | G |
| Osa06LNT0331900.1 | 6 | 4800577 | A | G |
| Osa06LNT0331900.1 | 6 | 4800943 | G | A |
| Osa06LNT0331900.1 | 6 | 4801386 | G | C |
| Osa06LNT0331900.1 | 6 | 4801528 | A | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0331900.1 | osa-miR5791 | Cleavage | 4.5 | 18.233 | 1 | 21 |
| Osa06LNT0331900.1 | osa-miR5813 | Cleavage | 5.0 | 23.876 | 1 | 22 |
| Osa06LNT0331900.1 | osa-miR5822 | Translation | 4.0 | 20.772 | 1 | 21 |
| Osa06LNT0331900.1 | osa-miR5837.1 | Translation | 4.5 | 19.185 | 1 | 21 |
| Osa06LNT0331900.1 | osa-miR167a-3p | Cleavage | 4.5 | 23.865 | 1 | 22 |
| Osa06LNT0331900.1 | osa-miR166k-5p | Cleavage | 5.0 | 20.811 | 1 | 21 |
| Osa06LNT0331900.1 | osa-miR1851 | Translation | 4.5 | 24.496 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0331900.1 | 6 | Qbph6 | Resistance or Tolerance | Insect resistance | RM510 | RM314 |
| Osa06LNT0331900.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0331900.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0331900.1 | 6 | AsTol | Resistance or Tolerance | Other soil stress tolerance | RZ516 | RG213 |
| Osa06LNT0331900.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0331900.1 | 6 | nan | Physiological trait | Source activity | RG138 | RZ398 |
| Osa06LNT0331900.1 | 6 | qRCRJ-6 | Physiological trait | Source activity | RM217 | RM402 |
| Osa06LNT0331900.1 | 6 | nan | Morphological trait | Seed | RG138 | RZ398 |
| Osa06LNT0331900.1 | 6 | nan | Morphological trait | Panicle/flower | RG138 | RZ398 |
| Osa06LNT0331900.1 | 6 | nan | Morphological trait | Panicle/flower | RG138 | RZ398 |
| Osa06LNT0331900.1 | 6 | nan | Physiological trait | Source activity | RG138 | RZ398 |
| Osa06LNT0331900.1 | 6 | nan | Morphological trait | Seed | RG138 | RZ398 |
| Osa06LNT0331900.1 | 6 | qSPTF6 | Physiological trait | Sterility | RM217 | RM111 |
| Osa06LNT0331900.1 | 6 | qNP-6 | Morphological trait | Culm/leaf | RZ450 | RZ588 |
| Osa06LNT0331900.1 | 6 | qLW-6 | Morphological trait | Seed | RM217 | RM111 |
| Osa06LNT0331900.1 | 6 | alk6-1 | Physiological trait | Eating quality | RM190 | RM253 |
| Osa06LNT0331900.1 | 6 | hr6 | Physiological trait | Eating quality | RM190 | RM253 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)