© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0030500.1
GTTTCTGTTCATACAATCTCTGACAAGGAAACATATAGGCAGTAATACAAATCAAAGAACCCTGCGATACTCATGCTACGGATTGGGAACGATCGCTCACACCATTTTACATGCAAGGTAACATATTTAGCAACGAATATAGAATCACAACAATGGCTCTCTCATGTCTTGCACACAACTCACTAAGCTCACAGTTAAATGATGCCAGTAATGCCAGCGTGGTATTATCATCAGGCCTAAGGTTTTGCTGGAAGACCGTCAATTCATTCATGGGTTAATATCTGTGCCCGCAGTCTTCACATCAAACCTTCCTGACCTGAATATTATGGGTGGACTGCGACCGCCAGATAGGTTGCCTGCCACTTTGAACAAGTGCAACCTCCTCGCCTTCCTTCACCATACCATGTTTCAGCAAGTATGACAAAGCGTCACCAAATGTCTTCTCAGCATCATCAGAAAATTCCATCTGGACTGGACATACACCTTGGTACAAAGCCAATCGTTGTCTAACTCTCTCCTGGTCCGTAAAGGCAAAAATGGTGCCAGAAGGGCGGTAATGACTAAGTAGGATAGCCATAAATCCTGTCCTGGTGAAAACCACAATTGATGTTCCAAGAGTGTTGGACATCATTGTTGAATGGTATGCAAACATTTCACTCATGTGATTCTTGAACACCTGACCAAGGTTAGCCGGTGTTTCCCCACCAGACATAGTGGCTTCAGTTCTCAGGGCAACAGTATGCATGACCTTAACAGCTTTCAAAGGAAACTTTCCGTGTGCAGTTTCCCCAGAAAGCATAATGCCATCAGAACCTTCTCGAACAGCTATAGCAATGTCTGAAACTTCTGCTCGGGTTGGAGTTGGATGAACAATCATACTTTCTAGCATATTAGTGGCAACAATAACAGCTTTTCCCATGCTCCTGCACATTCTAATAATTTCTTCCTGCAGCAGCGGTACCTCCTCAATAGGGAGTTCAGCTCCCAAGTCACCTCTGGCAACCATAGCCCCATCCGATGCTGTGATGATTGAGTGTAGGTTTGGAATGGAATCTGCACTTTCAATCTTTACAATTACATGTATATCGGCATTGGAGCTTCTGAGATAATCCTTCAATTCATGCACAACTTGAGCATCTTTGACAAAAGAAACGGCATAGTAGTCAACTTGATTCTCCACACCAAACTTAATATCATCCCAATCCTTGTCAGTTATTGATGGCAAGGTTGCGCTCTTTCCACGAACATTCAGGTGACGCCTGGATTTCAGTTCACCTCCATCAATAACTTCACATTTTACCGAATCTTCAGTTTTGGACTTGACCAACAACGACATCATTCCACCATCTACGAGGAGCATGTCACCCACTTCTACATCATTAACAAAGTCATCATAGTTAACGCTAACACATGTCTCAGTCCCAACTCCTCTCTTAATTGTGAAAGTGAACTCCTGGCCAGTTTCCAACATTATTGGTTGAGGCAAATCTCCACTCCTAACTTCTGGTCCCTTCGTGTCAAGCATAATAGCAATCACGTTATCCTTTGTTTGAGCATTATATTCCTTTACTAAGTCAATAACTTTCTGGTGTGATGCATGGTCTCCATGTGACATATTAAGCCGAGCCACATTCATGCCAGCCTCAGCAAGTTTCCATATCATCTCCTTTGTGTTAGTTGAAGGACCAATGGTGCACACGATCTTTGTCTTGCGTCTCACATTTGGTTTAGACCACACACCATTGGCTGATGTTGCAAGTTGCTGAATGGCCTTGAGATGCTGGAAGTTTTCTTCTTCCTTCACGTCCGCGTCGTCGTCGGCCGACACCGGCAGCACCTCGGCGTCGAGACGCGGGGCGCGGCTAATCACGGACGTGACGGCGGACTCGCGGCGCGCCCTTGCTGCCCCCGCGCTCCCACCGCACCAGCGCGGCGCGAACGACAGCCTCGCCGCCGGGCGGAGCGCGTCGGCCCCAGATCCGCCGCCACCCAGCGGCCTCCCCACCGCCGCCACCGCCGCCGCCGTCCCTGCCGCAGCCACCACCTGCGCCATCCCGATGCGGAGGAGATTTGGGAATGGAGAGCGAGAGAGAGAGGGACAGAGGAAGAGGAGGAGGTTGGCGAGGAAGAGAAGAGAATAGGAGGTGAGGTGCGCGTGCGACGTGACCCGCGTGCAGCGGGAGGAGGAGATGGATG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0030500.1 | 1 | 26894280 | T | G |
| Osa01LNT0030500.1 | 1 | 26890190 | C | G |
| Osa01LNT0030500.1 | 1 | 26892988 | C | T |
| Osa01LNT0030500.1 | 1 | 26888611 | G | A |
| Osa01LNT0030500.1 | 1 | 26888623 | A | T |
| Osa01LNT0030500.1 | 1 | 26889121 | C | T |
| Osa01LNT0030500.1 | 1 | 26890627 | G | A |
| Osa01LNT0030500.1 | 1 | 26891254 | C | A |
| Osa01LNT0030500.1 | 1 | 26891382 | A | G |
| Osa01LNT0030500.1 | 1 | 26891755 | T | C |
| Osa01LNT0030500.1 | 1 | 26893577 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0030500.1 | osa-miR1850.2 | Cleavage | 5.0 | 12.867 | 1 | 21 |
| Osa01LNT0030500.1 | osa-miR1861c | Cleavage | 4.5 | 20.292 | 1 | 22 |
| Osa01LNT0030500.1 | osa-miR1861e | Cleavage | 3.5 | 20.292 | 1 | 22 |
| Osa01LNT0030500.1 | osa-miR1861g | Cleavage | 5.0 | 20.292 | 1 | 22 |
| Osa01LNT0030500.1 | osa-miR1861k | Cleavage | 3.5 | 20.292 | 1 | 22 |
| Osa01LNT0030500.1 | osa-miR1861m | Cleavage | 3.5 | 20.292 | 1 | 22 |
| Osa01LNT0030500.1 | osa-miR2093-5p | Cleavage | 5.0 | 13.465 | 1 | 20 |
| Osa01LNT0030500.1 | osa-miR5144-5p | Translation | 4.5 | 9.91 | 1 | 21 |
| Osa01LNT0030500.1 | osa-miR5487 | Translation | 4.5 | 11.061 | 1 | 21 |
| Osa01LNT0030500.1 | osa-miR5491 | Cleavage | 5.0 | 10.101 | 1 | 21 |
| Osa01LNT0030500.1 | osa-miR5518 | Cleavage | 5.0 | 9.484 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0030500.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0030500.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0030500.1 | 1 | yld1.1 | Physiological trait | Source activity | RM5 | RG462 |
| Osa01LNT0030500.1 | 1 | QPh1b | Resistance or Tolerance | Submergency tolerance | RZ527 | RZ154 |
| Osa01LNT0030500.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0030500.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0030500.1 | 1 | nan | Morphological trait | Seed | CDO118 | CDO455 |
| Osa01LNT0030500.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)