© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0332800.1
GCTCAAGGCACGACTCCACACTTGCAATAATAGTTCATCCTCCTGTCATCTAAATAGTACAAAACCTATCGATTCCTTAACTATGGAACCCAAAAGTACGTCAAAAGCTGGGTGTACAACATGTACATATATAGGACTAAAGATATTTCTGCATTACACTCCAAAAGTATCCATCTGCATCAAACAGATCAAACGACTGCTTGTTGTGGTGTTCAAGGGGCAGGACCCCAGGATGCACACCGATGAGATTTGGTATGGCCAAAGGCAAAAATATCTGGAACGAAACAAGGTGACAGAATGCCTCCTATTGCTATGTAAGAACTCAGAACACATTCAAGCCTCTTTTCTAGTTATCCTGAAGCAATAGATTCCAAGAGCATCCTTGATTTCATGCACAACAGAAACGGCAAGATGCAGGTAAAGGCCCACTGTGTATGCGCAATACAGGAAAAGAACCAGCAGCTCATCAACTAAAGGAATCCCAGCATTGATCTTTGCTGTGAGAGCATTTGCAATAGCGAAAGGAAGAAACACCAGAGACATGCACATTCCAGTTTTGAGACCTTTGGGTTCATCACATAAATGAGCAAGTATCATCCTTCCCACCAAATATCCAAAAGCAAAACCAGTTCCGATCACAAGCAGATGTGGCTGATTCCTCATAATATCTGAAGGAGAGAGGTAAGACCAGACAGCAACTCCAGTTAACAATGCAATGAAAGGAAGGAGCATTGCCAATGCCAATACCATGCTTCCTTTTCTTGCTTCAACTACTTTTTGGACATTGCTGACATTGGATCCAATGGTAGGGATTACGGCAAACAGGATCATAAGAATCATCACAATAATGTATAAGGGGATATCTGGAATAAATGGAAGGGGTACCCAACTTAAAAGGGGTATCGACTTCCGAAAATCTTGTGCCCACCATTCAGCGCCAGTAAGAAAGGTAAAAGAGTGGGATAGATATATCAGCATCAGGCCCTCCGTAGGTCCATTTATTAAAGGAAGAATAAGTGTATTTGTAAAGAAGTGTTCCCATGTTGCAAGATAGAACGGGACAGCAGCAATCACCCAGAAACAGAAAGTAAACCTTCCACACATCAAGGTGCTTCCAAGGGCTAATGCTTCAAAAGCACAGGCAAGAGCATCACATCCATGATCAAAAAGTTCTCCTAGAGGACTTGATGAGCTAGTGCGCCTTGCTTGTTTACCATCAACAGCATCAAAAGTCTGGTATAAGAAGAGAAGTAATCCATGGGCAAGATGGACCCACCTAGGGGGAGCTGTGTCGAGGTGGGGCGAATAGATATAGCCAAGAAGTGCTGATACAACTAGAAACATGAATCCAGTGAGTGTGATCATATTAGGTGGCATCCAGAGCGGGAAGAGGGTGACGCATCTGCTCCAGAAGGGCTGGAGCACGTACTTGGCCACCACCGAGTGGTCCTGCCCGCTGTACCTGTACCGCTTCAGCGTCTCCACCCCGTGCGCCCCGATGTACCCCATCCTTCCCCTCGGCTCGCTCGCTCGCTCGTCGGCGGGGAGCTCCTGGTCGGGGGAGGCGTCGGCGGGGAGCAGTGGGGAGCTTGGGGGCGGCGGCGGCGGCGGCGAGATCGCGGAGGCGGAGAAGATGGGGAGCGGCGGATCAGTGATGGCGGCGATGGGTATATTCGAGTCGAAA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0332800.1 | 6 | 5277711 | C | T |
| Osa06LNT0332800.1 | 6 | 5277429 | A | T |
| Osa06LNT0332800.1 | 6 | 5279236 | C | G |
| Osa06LNT0332800.1 | 6 | 5282491 | T | A |
| Osa06LNT0332800.1 | 6 | 5284578 | A | C |
| Osa06LNT0332800.1 | 6 | 5284589 | T | C |
| Osa06LNT0332800.1 | 6 | 5284687 | A | G |
| Osa06LNT0332800.1 | 6 | 5281970 | C | T |
| Transcript ID | Transposon ID | Chromosome | Strand | Start | End | Counts |
|---|---|---|---|---|---|---|
| Osa06LNT0332800.1 | DTM_#DNAt_MULE_japo_Os0229 | Chr6 | - | 5281804 | 5282301 | 497 |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0332800.1 | osa-miR1319b | Translation | 5.0 | 18.74 | 1 | 24 |
| Osa06LNT0332800.1 | osa-miR1435 | Cleavage | 3.5 | 11.421 | 1 | 20 |
| Osa06LNT0332800.1 | osa-miR2095-3p | Cleavage | 4.0 | 18.764 | 1 | 20 |
| Osa06LNT0332800.1 | osa-miR2120 | Cleavage | 5.0 | 13.922 | 1 | 24 |
| Osa06LNT0332800.1 | osa-miR2929 | Cleavage | 4.5 | 14.686 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0332800.1 | 6 | alk6-1 | Physiological trait | Eating quality | RM190 | RM253 |
| Osa06LNT0332800.1 | 6 | hr6 | Physiological trait | Eating quality | RM190 | RM253 |
| Osa06LNT0332800.1 | 6 | qRCT6b | Resistance or Tolerance | Cold tolerance | R1954 | RM253 |
| Osa06LNT0332800.1 | 6 | rrsd6b | Resistance or Tolerance | Drought tolerance | RM253 | RM314 |
| Osa06LNT0332800.1 | 6 | Ps-4 | Others | Others | nan | nan |
| Osa06LNT0332800.1 | 6 | QGt6b | Physiological trait | Eating quality | RM253 | RM314 |
| Osa06LNT0332800.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0332800.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0332800.1 | 6 | AsTol | Resistance or Tolerance | Other soil stress tolerance | RZ516 | RG213 |
| Osa06LNT0332800.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0332800.1 | 6 | qRCRJ-6 | Physiological trait | Source activity | RM217 | RM402 |
| Osa06LNT0332800.1 | 6 | nan | Morphological trait | Seed | RG138 | RZ398 |
| Osa06LNT0332800.1 | 6 | nan | Morphological trait | Panicle/flower | RG138 | RZ398 |
| Osa06LNT0332800.1 | 6 | nan | Physiological trait | Source activity | RG138 | RZ398 |
| Osa06LNT0332800.1 | 6 | nan | Morphological trait | Panicle/flower | RG138 | RZ398 |
| Osa06LNT0332800.1 | 6 | nan | Physiological trait | Source activity | RG138 | RZ398 |
| Osa06LNT0332800.1 | 6 | nan | Morphological trait | Seed | RG138 | RZ398 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)