© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0333100.1
CCTAGTCAATTGACTTTTCTTTTTCATCTACAGTTTTTAGGGAACTTCTTTTCCTTTTTATGTACATCGGCTGTCTTCTACATCTCATTTTATACGGGAGGAAACACAAATTAGTGAACCTGCACAAAACCGACAAGACCAAAACTAACAGCCTACTTCCCCCACACAAGAAATAGTGGAATGGCTAAAGTCCGCTATGCACATCCAAGTATCAAACTATGCATACGCCGATTGTGCACATGGCGCTATATGACGTCCGACTATGCATACCCCGTAGATCGTGATTGTACAACCGAAAATTGCCGACTTGATTTCTATTGCAACCTTTGCATCTCAGCTCTCTTCAGTCGCCTTTTCCGATACCTCCATGCGACTTGGATGCGATTTGCTGCAAGGTTCTTCCAGTAAGGTGATTCATACCTGATTGTACCTAGCACAAGTGGATTGCGCAAGAATCTTGAAAATTGTGAAGTCACTTCTTCCAGATCACGTGCTCGCAGTACAAAAGCTTCAACATTTGTTAAACATCTGACAGTACGTATGGCGACCAAACGCATGCCATGCAACTTGATCTTCCCACCATCTCGGTTCACTGAAGATTGCTCCAAGTACCAGGAAAGGAGTTCCTCACCACAAACATCTCCTTCTTGCAAGGGAGACTTATTTCCATCTGCACTGATGCTTTCCAATCTACCCCTGACTATAAAAACCATCTTTTCAACAGGACCACCCTGATAAAGAATATCACTTCCTGTAATATACAAGTTCTGCCTTAGCTTGTCACAAATTGCATCCCAGGTTGCATTGTCCATCAGGTTAAACAGCCGGACCTTCTTAAGGAACCCAAAGAAATGGCGGCGTATGCCCCTTTGAATATCTTCTGGCAAATTGCTCAAAAGCTCTTCTTCATTCACTCCTCTAGTAGCTACCCAGCTGAACCTCTCGGCAGATCTAACCCTCCTTCTCAGATCTTCTGGCAGCCGCCTATGGCTCATCCACTGTTCAACATCACGCCTTCTTAATTGCATCTCTAGTCTCCTTTTTCCAAGAGCTTGGAGAAAATTCTGCATGGACCCTATGAGTAATGCGAAAAGCAACAACCCCAGTCCAATAATAGCCATAGTGAATATTACTTCCCATACAAAGTAACTTGGGATCAAATTGCCAGCTAATGTACTAATTTGCTGAAACCCCCAAAAGAGCGAATATATATAACGCTTAAGTCCAGGTTCTGTGGTTAGCAACACTGCCTGTTGGTAGATGCCATAAGGGAAATTACCGCTTTTAGTATCAAAACAGCCAGTTAAGTCTGAGTTGTTCAACCAATTGGTCCTATTTATTCCAGTAATTCCACAATCTGTACAATTATTACACAACGCTTTTGATATGTTTGATGCAGCACAAGAATCCCGTAGACATTGATTAACCCTTTGTAGTCCGAAGAGGTACCAACATGAACCAACGACATGCCCAGCCAAAACAAACATTAGAAGATTGATCACAAAAGTAGACCATGCTGACTCAAAAATGAATCCATTTGTAGATTGACCACCAAGCAGTGGCACAAATCTTATAATACGTGGTACATACTGAAGAAGAACTGTAGCACGCAACAAGTTTTTTGCATAGTTTGCACTTGATAATCCCACATATTTAGGGATAACTAGCAATATCATCACCTGAGGGAGTGGAAGAACAACAAATAAGTCGAGTACAAAAAACCCACGAAGATAGCGCATAGCAATTTTCATAGGCTCATCAACCAAATCTCCAGTTCCCACTACTCTCGACTCCGGTGCTACATATGCTAGCCTGAACTGAAGAAGCATGTGTAAAAAATATATGGCGTCAGTCACACTTCTTCCAACAGCTAATGCTATCGCGAAATTCCAGTTGAACACTATACACTTATAATCCTTATCTACTGACAATAGGAAGAAAAACAGAGGGTCATTGAATATGGCTAGCAAGCATGATATCACAAAAAACTGGTTCCACCGATGAACAGCCTTATCATGTGGCTTCATAATTGGAATGTATGAAAGGTAATGCCCAGCTTTCTTCTTCCATCGATCACCGTAGCCATAAAGAATGTTGTGAAACTTGTTATCAAACGGAGCTAAACTTCTCTGGAAATGCCTTTTGTTTTTACAAGCACGAGGACAGTCGACACAATCAGGATTATCACACAGTCCCAGAGGCTCAGAGTACATCATCAGGTGTTTGTTCTTCGGAACATGCTGGTCATAAGGCCAGTTACTTATTCCAACTTCTTCCGGCGTAACAACATGTGGTTTGCTCTTAACCTTTGGACGAGGCAGCTTATCGAGCATGTCTCTGTTTCCTGATGGAATAGCCACGGATGTATACTGAGTTGGTGCTGGGGTGAAAATAGGACCACTGTGGGATATGATTGAGTCTTCATATATATCATCCCTGACAGGTATACACATCGATACACTTCTAGTAGGAAATCTTTGTAGCTCTAGCATTGGAACATCATCTCTCTCTTGGCCAGACATTTCCTTACACGGAACCCAACATCCACGCGTTGATCCGCCGCGGCGCCACGAAACGAGGAGGGTGAGAGCGCCGCCGGCCGGCGCTGCCTGGGCCGCGGGAGGGAAGAGACGAACTCGAGGCGCGCGCGCCACGAAGAAGCTTCACTTCGCTCTCGCCTCTCGCTCTCCGCTTCGCGCGAGTTGGGACTTGAGAAGAAAGCGAGAGAGAGGGCGGTGGACTAGTTGCGGCTCGCGGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0333100.1 | 6 | 5462663 | G | A |
| Osa06LNT0333100.1 | 6 | 5462815 | T | C |
| Osa06LNT0333100.1 | 6 | 5464225 | G | A |
| Osa06LNT0333100.1 | 6 | 5464354 | A | G |
| Osa06LNT0333100.1 | 6 | 5466136 | A | T |
| Osa06LNT0333100.1 | 6 | 5463705 | T | C |
| Osa06LNT0333100.1 | 6 | 5466904 | C | T |
| Osa06LNT0333100.1 | 6 | 5468861 | G | A |
| Osa06LNT0333100.1 | 6 | 5470165 | A | T |
| Osa06LNT0333100.1 | 6 | 5471115 | T | A |
| Osa06LNT0333100.1 | 6 | 5461595 | G | A |
| Osa06LNT0333100.1 | 6 | 5463292 | T | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0333100.1 | osa-miR5526 | Cleavage | 4.0 | 19.412 | 1 | 21 |
| Osa06LNT0333100.1 | osa-miR6246 | Cleavage | 5.0 | 11.327 | 1 | 23 |
| Osa06LNT0333100.1 | osa-miR6247 | Cleavage | 3.5 | 19.012 | 1 | 21 |
| Osa06LNT0333100.1 | osa-miR6251 | Cleavage | 3.5 | 16.784 | 1 | 21 |
| Osa06LNT0333100.1 | osa-miR162b | Translation | 4.5 | 19.605 | 1 | 21 |
| Osa06LNT0333100.1 | osa-miR1849 | Cleavage | 4.5 | 18.388 | 1 | 21 |
| Osa06LNT0333100.1 | osa-miR1862f | Cleavage | 4.5 | 12.113 | 1 | 20 |
| Osa06LNT0333100.1 | osa-miR1862g | Cleavage | 4.5 | 12.113 | 1 | 20 |
| Osa06LNT0333100.1 | osa-miR2873b | Cleavage | 5.0 | 16.323 | 1 | 21 |
| Osa06LNT0333100.1 | osa-miR5492 | Translation | 3.5 | 12.876 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0333100.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0333100.1 | 6 | qRCRJ-6 | Physiological trait | Source activity | RM217 | RM402 |
| Osa06LNT0333100.1 | 6 | nan | Morphological trait | Seed | RG138 | RZ398 |
| Osa06LNT0333100.1 | 6 | nan | Morphological trait | Panicle/flower | RG138 | RZ398 |
| Osa06LNT0333100.1 | 6 | nan | Physiological trait | Source activity | RG138 | RZ398 |
| Osa06LNT0333100.1 | 6 | nan | Morphological trait | Panicle/flower | RG138 | RZ398 |
| Osa06LNT0333100.1 | 6 | nan | Physiological trait | Source activity | RG138 | RZ398 |
| Osa06LNT0333100.1 | 6 | nan | Morphological trait | Seed | RG138 | RZ398 |
| Osa06LNT0333100.1 | 6 | nan | Physiological trait | Eating quality | RM253 | RM162 |
| Osa06LNT0333100.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0333100.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0333100.1 | 6 | AsTol | Resistance or Tolerance | Other soil stress tolerance | RZ516 | RG213 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)