© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0333200.1
AAATAACAAAACGTTTTATTGACTACAAAGGGTATCTGTTACAAACATTTGGCTATACGATGGACTCGTACAAAATATACATCCATCTCAACTCGCCAGTTTGGCCAAAATCACCATATCTAAGATCTTGACTTCGTATGTGTCATCAAGCTTCACAATGCCGTCGGAACCATCTATACCTATGAGCTTTCCAGAGTATCCACGGAAATTGCCGTTCATTATCTTGATCTTGTCGCTCTTCTTTGGCCGAATAACCTCGAGCTCGGTTGGAAGAACCGTCACGATCTCACCATTACCTGATGACCCAAGGGCGACGCGACAAGATCCATCCGCAAGAACTTCCCTCACCACACCAGGACCATCATCGCCTGCCCTCAACACATTAACCAAAACATCTGGCAACAGCCAGTTACCTTCACCTTCACCACCTATTATAGGCGACATTATGTCCATTCCAACATTGCCTGGAGTCATCGGTTGACCACCAGGTGTACCAGGAAGGTACGAGGCAGAATTCGGTGTCATTGGTTGACCTACAGGAGTGGAAGGCACATATGGGCTTGGAGCATTTCCGTAGTTGCTCTCCCTGGGAGTTGGAGCGTCATTATAGCTAACTCCTGGCGTATTTGCCCACCCTGATCCAGGTGTGGGTGCTTCATATGGCCGAGCTGGTGGAGTTCCTGGCTGGTAAGCTGGACTGCTTCCCCAAGTAGCAGGATTTCCTTCTTCCCAGTTATCCCTCGGAGGACTCATAGGAGCCCAGCCACGACGCATAGGAGTCCGCATGCCATCGTGTATTGGGGTTGCTCCAGGGTCCCGCATTGGTGTCTGGTAAGGATGAAGCGGTGTTCGAGATGGGTGCATTGGAGTTTCACCACCCAACGGATAACGAGGTTCACGGAATGGTGTTGCAACAGTAGGTGTATCAGCAATATCATCTCTTTTAACTGTCACAATCTTCATTAACGAATCAAGCTCCACACGCACAAGCACGCCAGTCACCTCTTTAACACGGCCACGGTACCCCTTGTAAGGACCAGATTTAATTTTAATACATTTGCCCACCAATGCATCATGCCCTCTGCCACCACGACCACCTCCTCCAAACCTTCCACCAAAGTTCATATGAGGTCCTCTTGGGGGCAGCCTTCCCGGTGATTGCAAAATGCTTGCTGGAGATCTCAAAGCACCAAGCCTTGGATCTGACGTATCCATACCATTTCCACGACGTCCACCAGCTGATCCACCAACAAGAAGACAGGACTGTGCTTTTGCACAAATAAAGCCTGCATGCTCGAGGTGGTGTCTATCATAGATAAATAATATCCCCTTATGTATGTGTTCCACTGGTCCTTGTTTTCCCTTGCATGCTCCCTCAACTACTCGGACAACATCCTTAGATGAAATCATATTGTTGGACCGATCTTTTGCGGATGTTCGGCGATCAATCTTGCTTTTTATTTCTCTTAATTTTACTAGGACAACTTCTGGTCTATCCGGTACTCCTTTCAGAACCTGAAATGCCTCAGTTTCCACCCTTATAATAACCCCAAATGACAAGTTGTCCAAAAGAACAAGATCATGCAGCTCATAATCACCAATTCTGGTTATTCCCGTTGTGATCTCAGAGCTCTCCACAACATGGTCCGCAAACACACGTATATGTTCTTTTGTCGTGTCAGATAAAATTATCAAGACATGCCCTTCCACTTTAACAACCATGCCTGTTGCACCTTCTTGAACACCTGATACCACTTTAACATGATCTCCGGGTTTAAAATACTTGCAAAGCTCTTTCTCATTGAAGGCTAACGTTTTCGGTAGATCAGATATTTTTGGTCTGATGTGAACAGTCTCATCCTCTACTTTCTCAACCCAACCCTCCAAATTTTTCAGATCACCTTTGATAACAATGACAGCATCACCCTTCATAAAGTGCCCCTTTTTCCTATTAGCAAAAAGCGTAGACAAGCTAGACATATCCCCATTCATGTCATCACCAGGTTTTCTGAACTTCTCCAGTTCATCGAATGATGGCTGAATATTCTGTGTGCTGATTGATTTTATTGAGACAGTTTTGTATAAGAAGCCATCTTTGAACATTAAGCCATCAATCATCTCAAAGTACTCCCCAGAGTCTTTATCCCTCCTCCGTTCCACACGAATGTGCATCTCCCTGGCCTCATCAATATTAAAGAAACGTGGTGGTGGGACAAATGCTTTCTTCTTCACAGCCTCCCTCCCTTCCAGTTTACTAGCCAAAGCTTGTAAATCTATTCTAGGGATCAGCTTCACAGTAACCCTTTGGCGCACATTGTCAACATCGACAACCTTAGCAAGGTCACCTTTATATATACCCAGCTTCATTCGAACCCAAGCGTCCCTAGAAAGATCAACAGATTTGCTCTCCACAGAGAGGACATCTGCCATTTCTTTTATAGGAACTAATGTTATTTTTGCTGAAGCGTAAATGTTTCGTAGACCTTTGCAAGCCTCCTTGACATGGGCCTCCTTCTCCGCTTCAACATAAATATAATTCTTTAGATGGTCTAGCGCAACAACTGACTTTATCTGGAGATCTGATCTATCAATGAACTTTTGCATTAGACAAATTGCTGTCTCCCTCTCGTGCCCAATCGCACATTTCACCATCCATAGCTTTGGATCCTTCACCGATGGCAAGAGAGCTTGCTGTTCTACTTCAGCAGCTTCTTCTCCATACTCAATATGAGTAGATCTTGCATATCTCTCCCTTACTTGTCTTTCAATTTCATCAATATCCTCTTCTTCATCCCTCATAGGTATTGAACGATGCCTTGAGCCCCTAACGACATCCTCGTCTGGAAGGTCGGCCCCAGCATCATTGATGAAATCGTCCTCGCCCTCGCCGTCGTCCTCCTCCTCCTCGTCCTCATCCACCTGCGCCTCCTCGTCGAAGAACCCGCGCACCCCGCCGCCGCCGCCCTTCTTCTTCGGGCGGCCCCCGCCGTCGTCGTCGTCGTCATCCTCCTCGTCGTCCTCGATGGCGGAGTCGTCAATGAAGTTGTCCTCCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0333200.1 | 6 | 5524488 | A | G |
| Osa06LNT0333200.1 | 6 | 5525181 | A | G |
| Osa06LNT0333200.1 | 6 | 5526002 | T | A |
| Osa06LNT0333200.1 | 6 | 5526982 | C | T |
| Osa06LNT0333200.1 | 6 | 5528183 | A | G |
| Osa06LNT0333200.1 | 6 | 5528273 | T | C |
| Osa06LNT0333200.1 | 6 | 5529330 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0333200.1 | osa-miR5819 | Cleavage | 3.5 | 6.343 | 1 | 21 |
| Osa06LNT0333200.1 | osa-miR5830 | Cleavage | 4.5 | 16.272 | 1 | 24 |
| Osa06LNT0333200.1 | osa-miR6255 | Translation | 3.5 | 7.435 | 1 | 22 |
| Osa06LNT0333200.1 | osa-miR166e-3p | Translation | 5.0 | 19.374 | 1 | 21 |
| Osa06LNT0333200.1 | osa-miR399i | Cleavage | 5.0 | 23.14 | 1 | 21 |
| Osa06LNT0333200.1 | osa-miR171c-5p | Cleavage | 3.5 | 4.289 | 1 | 21 |
| Osa06LNT0333200.1 | osa-miR171g | Cleavage | 5.0 | 18.225 | 1 | 21 |
| Osa06LNT0333200.1 | osa-miR408-5p | Cleavage | 3.5 | 12.807 | 1 | 21 |
| Osa06LNT0333200.1 | osa-miR528-5p | Cleavage | 5.0 | 12.242 | 1 | 21 |
| Osa06LNT0333200.1 | osa-miR1854-5p | Translation | 3.5 | 16.954 | 1 | 21 |
| Osa06LNT0333200.1 | osa-miR1854-5p | Translation | 5.0 | 6.057 | 1 | 21 |
| Osa06LNT0333200.1 | osa-miR1876 | Cleavage | 4.0 | 14.417 | 1 | 24 |
| Osa06LNT0333200.1 | osa-miR2879 | Cleavage | 3.5 | 10.114 | 1 | 24 |
| Osa06LNT0333200.1 | osa-miR5083 | Translation | 3.0 | 21.641 | 1 | 20 |
| Osa06LNT0333200.1 | osa-miR5152-5p | Translation | 4.0 | 12.702 | 1 | 21 |
| Osa06LNT0333200.1 | osa-miR5152-5p | Translation | 5.0 | 15.521 | 1 | 21 |
| Osa06LNT0333200.1 | osa-miR5494 | Cleavage | 5.0 | 9.778 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0333200.1 | 6 | nan | Physiological trait | Eating quality | RM253 | RM162 |
| Osa06LNT0333200.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0333200.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0333200.1 | 6 | AsTol | Resistance or Tolerance | Other soil stress tolerance | RZ516 | RG213 |
| Osa06LNT0333200.1 | 6 | nan | Morphological trait | Panicle/flower | RG138 | RZ398 |
| Osa06LNT0333200.1 | 6 | qRCRJ-6 | Physiological trait | Source activity | RM217 | RM402 |
| Osa06LNT0333200.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0333200.1 | 6 | nan | Morphological trait | Seed | RG138 | RZ398 |
| Osa06LNT0333200.1 | 6 | nan | Morphological trait | Panicle/flower | RG138 | RZ398 |
| Osa06LNT0333200.1 | 6 | nan | Physiological trait | Source activity | RG138 | RZ398 |
| Osa06LNT0333200.1 | 6 | nan | Physiological trait | Source activity | RG138 | RZ398 |
| Osa06LNT0333200.1 | 6 | nan | Morphological trait | Seed | RG138 | RZ398 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)