© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0333400.1
CAAAAACTCTGGCATGGATTCATTACAAGTCACAACAAATGTAGCCATACATCAACGCAACAGGTAATCGTCATAGCACATTTGAACCTACATGTGCTTAATTCACTCATGTTCTGGTTAGCTACTGGGAAACTGTCAGCTACAGATGTCAGCCTAACAAGACTTTCCTCGCTTCTCTTTAATCATCCACTAATGGCAATTGCTTGTTTTCTTTTACAGAACTAAACTAACAATTGTACAAAGCATATCTCACAGATTAGCATCTAGTAGCTAAATCAGTGGATGAATTCTGCCATGTCACCCCTCGTCTGAGTGATGTGAGCTTGAGCCTTGAGGGGTCAAATACTCGAATATTCTGGTCGGAAGCTCAAGTCACACTTTGAAGAACTCCCATCTGCGCCGTTTGTAAATTTACAACCTTGGCCGACCGTGCCCCTATGGCAATATCATGGTTACACTGGCCAGCTCCGCTGGCTGCATGTGCTTTCCACATGGAGAATGCTTCAAACACTCTGGCTATCCACGAAGGAGCCACCTTGGTTGGCTTCTATCCACCAGGTCCTTCTACATTCTGACTCAATTGCCTCTTTTTGGACAAGGCGCTACGTCGAGTATAGACGATACTCTTTGGAGGGCGTTGGTTCTTTTTATCCGATGATTTTGTCTCACCCTCTTCTGATATCTGCATGGCAGTAGCTGGTTTCTTCGGAAGATTCTTATCAGCAAGTGATTCCCGGTCATCCAGCTTCTGCTTGTACGATATTGACGATGTTGAACTGTCAGCTGTGTTCCTATCAGCATCGCTGTTATTGAGAGAAAACCTAACAGTAGGTTTCCTGGAAATAATACTGTCAACCGCGACATCATCTGTTCTTTGCATTAACCCACTATATGAGTTATTGACAGAAGTTGTTGCAGATTCTGAACTTGCTCCAGGTCCAGATCCACAATATGAAGTCCGGGTTGAATAGGCAATAGAATTCCTTCTTGCAGCAAGTGTATCATGTCCACATACAACCAAGTCTTTCTTCAACTTTTCTCTTTTCACAACTCTCTCACAAATAAGGCGTAATACTTCCAAGTCAACCCTCATCTGTTTCATATTCTTGACCTCCTCAGGTCCATGTAATTGTAGTAAGTCAGCCTTTCTTTGCTCAATGCCATGCTTGCCACAATATGCTTTATGTTCCAACGTACTACCAATTGTTTTTGTATCCATGTAAAAACCAGCATCTCTAGCGCACGTAGGATGAAAAGTAATTTGACAGTCCACAGTACTGCACTTCAAGCATGAGCCAACATTGCGGTGGCAGATAGCGCATGTATCCTTATCCTTGGGAAGGCTCTCCATCCCATCTACTGCATTATATTGTCCCCTTGTGAACGTGCTCTCCAACAACCACTCAGCACAAAAGGCATGAATACATCGCCCCTTTATTGTTTTTCTAAAAGCACCAGATGTTCCATGGCACAAATCGCACTGCAACAAGCATGGTTTTGAACCGTCGCAATCTGATTGACTGCCAGCGACAACATCTGATGGCATCTCTTGGCAAAGTTCACACTTCCAGGGACCTGTGGGATTCGTCACACTCCGGTAGCAATCCAAATGCACAGCAGCCTTGCAGCTGGAGCAGACAAATATCCGGTTCAGTACAGTCTCAGATCGCATGCAGATATCACAGGGAAGAGCATTTTTCTTGGAAAACTTTGCCAGATCAAAACTGCCAATATTAGCATCTGCAGAGACTTTACTGTTTGGTGACGAATCATTTGCTTGTTGCACAGAAATCAACTGGCTAACTCTTGAAGATCCAGTATTGAATTTTGGGATACTCTCTTGTTTGGGACTATGAACCTCTTGCTTGGCAGGCACTGCAACAGGAACAGACTCTTGTTTGGCAGATAGTACATCACATTCTGCCACTTTTCTAACTGGTGCATTTCGTGAGGTAGGTAAAATACAACGTGCAGCTGCAGCCATGATAGCCTGAGCTTCCTTGTGTCTCCTCTCAGTGTTCCCACGTTTCTTGGCTTCCCTTAAGTCGCGGAGGAACTGGTTTGCAATGATATGGTCCCATTTTCTCTTATTGAAAGAATCCAAGTCATGAGAAAGAGACTGGACAATCTTCAGTACTAAATCTTCATATCTCTGCTTTGCACCACCAACATCATCTAGTAGCCTGGATTGTAAATGAAGTAGTTCTCCTTCTATTTCATCATGGGGTGAATGCTCCAGAATACCTGATGATTTTGCTTTAGAAACTTGATCTGCTACAGCTATGTCTGCTAGCTGTTCAAGTTTTGTTGACGAGCTACCAGCAATTCGATCATGTGGATCACAGGTTGATTGCTCATGACAATGTATTGGATGCTTGTTTTGCTTAAAAATATGGTCCCACAAAATCCGCAACTTTCTCTCTATGAATGGATGAACATAACATCGGGAACCATCCTGGTTGAGAAAGCATTTGCCAGAAATGCAATCTTCACCACAATTGTGGAAACCATTTTCTACTGAATCAGCCCAGTCTTTGTTAGTATTATCGCCCTCTGGACAGCAATGATCAAACGAAGAGATGCCTTCCTCCAGTTCTGAGCAAATTTGTGTATCAGTTAAGCTCTTACTCTCACCTGTAAACACAGTACCTTGTAGTGCCAAAGAACCCTCTTTAGAACACTTCTCTTGAACAGAAGGTACACGAATGGTGTTTTGCAGTAACTTGATTATTTTCAACTTCAGACCAGGGGAGAAGGTCGATGTTTCAGGCACGAGAGCAGCTTCCAAAGATTCTGAAGACACACCCAATTCTGATTCTATATCACCAACATTAACCATTCCTTGGTCAATTAGCTTTCTAAGAGCTGTAGAGACATCACCCGAGTTGCTCACAAGACACCTATCTCCTATAGGTCGATCAACAGCCATATCTGTTATTTGGGTTTCTTGACTTTCCACACTCCTAGCAGTAGATGGCGATGTGGCTAATTCTGTTGTCTGTTTGAGGCTAGACGAACAAGAGCTAGCAATCATGCTGCTGGTAAATTTGTCCTTGTTATTGCGTGTCAATCTCAGTTGTTGAATCTTCTGAGTGGCAAGGCTTGCATCATCAAGCTCGATTTGTGAGGTATCCTCTTCAGCACATATTCTGTCATTCTGTATTGAGATAGTTTCTTGGACTGTCGAATGCTTCAAGCAAAATGCCCTCATCTCAACATTGGTGTTCCCAGTTTTGCCCCATATCTCCATCTGATGCTTTGACTCTCTTGCACATATAGGATGAAAGCAGGCTCGGCATGCTCCATGGCTACATCGAATGCATGCACCATGCATAACCTTGCAAAGACTGCACACCAATTTTGTCCGGTTCTCTTGGATATCTCCTACATTGGTGACTGGTTCCATTGAATTCAAGTCCTCTACAACAACCTCTGGTGTCCAGAGACTACAAAACAAGTGTACAAATTTTAGGTTGCCTCCATCTGCAATTTGACCGGAATCCCTTTTTACAGGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0333400.1 | 6 | 5580287 | T | C |
| Osa06LNT0333400.1 | 6 | 5579090 | A | G |
| Osa06LNT0333400.1 | 6 | 5580365 | G | C |
| Osa06LNT0333400.1 | 6 | 5576760 | T | C |
| Osa06LNT0333400.1 | 6 | 5576778 | T | C |
| Osa06LNT0333400.1 | 6 | 5577083 | T | C |
| Osa06LNT0333400.1 | 6 | 5577626 | G | A |
| Osa06LNT0333400.1 | 6 | 5577639 | C | T |
| Osa06LNT0333400.1 | 6 | 5578051 | T | A |
| Osa06LNT0333400.1 | 6 | 5578764 | T | C |
| Osa06LNT0333400.1 | 6 | 5579772 | A | T |
| Osa06LNT0333400.1 | 6 | 5580349 | A | G |
| Osa06LNT0333400.1 | 6 | 5580465 | A | G |
| Osa06LNT0333400.1 | 6 | 5580815 | T | C |
| Osa06LNT0333400.1 | 6 | 5583871 | A | C |
| Osa06LNT0333400.1 | 6 | 5577567 | T | G |
| Osa06LNT0333400.1 | 6 | 5582385 | A | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0333400.1 | osa-miR5806 | Translation | 4.5 | 17.57 | 1 | 21 |
| Osa06LNT0333400.1 | osa-miR5837.1 | Translation | 4.0 | 21.06 | 1 | 21 |
| Osa06LNT0333400.1 | osa-miR6253 | Cleavage | 4.5 | 12.203 | 1 | 22 |
| Osa06LNT0333400.1 | osa-miR6254 | Translation | 5.0 | 16.214 | 1 | 21 |
| Osa06LNT0333400.1 | osa-miR156a | Cleavage | 5.0 | 18.46 | 1 | 20 |
| Osa06LNT0333400.1 | osa-miR156b-5p | Cleavage | 5.0 | 18.46 | 1 | 20 |
| Osa06LNT0333400.1 | osa-miR156c-5p | Cleavage | 5.0 | 18.46 | 1 | 20 |
| Osa06LNT0333400.1 | osa-miR156d | Cleavage | 5.0 | 18.46 | 1 | 20 |
| Osa06LNT0333400.1 | osa-miR156e | Cleavage | 5.0 | 18.46 | 1 | 20 |
| Osa06LNT0333400.1 | osa-miR156f-5p | Cleavage | 5.0 | 18.46 | 1 | 20 |
| Osa06LNT0333400.1 | osa-miR156g-5p | Cleavage | 5.0 | 18.46 | 1 | 20 |
| Osa06LNT0333400.1 | osa-miR156h-5p | Cleavage | 5.0 | 18.46 | 1 | 20 |
| Osa06LNT0333400.1 | osa-miR156i | Cleavage | 5.0 | 18.46 | 1 | 20 |
| Osa06LNT0333400.1 | osa-miR156j-5p | Cleavage | 5.0 | 18.46 | 1 | 20 |
| Osa06LNT0333400.1 | osa-miR396a-5p | Translation | 4.5 | 19.126 | 1 | 21 |
| Osa06LNT0333400.1 | osa-miR396b-5p | Translation | 4.5 | 19.126 | 1 | 21 |
| Osa06LNT0333400.1 | osa-miR396c-5p | Translation | 4.5 | 19.126 | 1 | 21 |
| Osa06LNT0333400.1 | osa-miR2094-5p | Cleavage | 4.0 | 21.335 | 1 | 21 |
| Osa06LNT0333400.1 | osa-miR2869 | Translation | 4.0 | 14.998 | 1 | 21 |
| Osa06LNT0333400.1 | osa-miR1863c | Cleavage | 5.0 | 11.932 | 1 | 24 |
| Osa06LNT0333400.1 | osa-miR1863c | Translation | 4.5 | 14.452 | 1 | 24 |
| Osa06LNT0333400.1 | osa-miR1863b.2 | Cleavage | 3.5 | 14.926 | 1 | 23 |
| Osa06LNT0333400.1 | osa-miR1863b.2 | Cleavage | 5.0 | 12.162 | 1 | 23 |
| Osa06LNT0333400.1 | osa-miR5337a | Translation | 3.0 | 16.238 | 1 | 21 |
| Osa06LNT0333400.1 | osa-miR5541 | Translation | 5.0 | 16.161 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0333400.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0333400.1 | 6 | qRCRJ-6 | Physiological trait | Source activity | RM217 | RM402 |
| Osa06LNT0333400.1 | 6 | nan | Morphological trait | Seed | RG138 | RZ398 |
| Osa06LNT0333400.1 | 6 | nan | Morphological trait | Panicle/flower | RG138 | RZ398 |
| Osa06LNT0333400.1 | 6 | nan | Physiological trait | Source activity | RG138 | RZ398 |
| Osa06LNT0333400.1 | 6 | nan | Morphological trait | Panicle/flower | RG138 | RZ398 |
| Osa06LNT0333400.1 | 6 | nan | Physiological trait | Source activity | RG138 | RZ398 |
| Osa06LNT0333400.1 | 6 | nan | Morphological trait | Seed | RG138 | RZ398 |
| Osa06LNT0333400.1 | 6 | nan | Physiological trait | Eating quality | RM253 | RM162 |
| Osa06LNT0333400.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0333400.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0333400.1 | 6 | AsTol | Resistance or Tolerance | Other soil stress tolerance | RZ516 | RG213 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)