© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0333700.1
GAAGATAAATAGTTCTCATAATTAGATTAGATCATATGACTATGGGGCACAAAAATAGATAATTTAGGGCCATAATAGTGCACACCTTCCCCTATACACTGTTAGTATACACCTTACCATCCCAACCTAGAAGGCCCCTTCTAATATATCCACTAGTATAACTATACACAACATATGTACAGTCATCGGTGCAAAAAAGAAATTGCAGGTGAGTCAATCTCAAGGAAACTTACATAGGAGAAAGCTTGCTCAGAGTCATATTAGACATCTTGCCTCCGTTATGTACACAAAACTCACAGTTGCAGCAGACAAATTATAGCCTTGAGCGTCGAAAATACTTGATGGGATTGAAAGGGCCGAGTTGCCGCGCAGAAGCCAATGTTGGCCGTCCGTTTGGGGACACTGTTGGTTTGATGTCCCATCCTTCAACGTTCTTCGGAACACAAACATCAAACAGAATTTGGCCAAGGACTCCTTGAGGCTCCATGCTGGGTGGATAGGATAGTTGTCGCCTCTGTTCATCAATCAAAGAATCCGGATCCCTAGATTCATTATGGTCCTTTGAACTTGGCAAGAAGAAGTGGTCACTGGGGCCGTTGGCTACCCTTCTCAGCCTCTCATTTGAATTAGCAGCCACGTTGTGCAGACTGCACACGGAGTGTGCTATCTTGTATTCCTGATCACTTGTGGCATTCAGCTGGCTTCTGTGGCAAAAGGTGACAAGAGCTTTTATCAGAGTATCATTTACAGCACTCCTGTATTCTGCTTCATGCAACATGTAATGGCCTGCATAATATCAAGGGAGGTTATCTGATATTATGATAGTCCATTAAATTTGATAATTGTCTAGTAGCACTGTAGCAGAGAAGAAATGTTAAAGCTTTAAGTTGATAATGATACACCCATAAATAATTGTAGACTATATCGCCGGTTGCAATGTAGACCATAAGATTAAAGTATAGCATCCTCATGTCTAGCAATATAAATGTGCAAACAGCTCATATTGGATAGCTGAGCTTAAAATGAATTCTTTGCTTAATTGATAGGTACAAAATATTTCAAGTCATCACTATACATGGGAAAGGATGCTAACTAGTAAATAATGCAAATGATGAATTTATTGTCTTCAGTTGTGAATTGTTCTAGGACATGAGCTCAAAGGTGAGTCTTCAAAACCAGTCAGTTGATTTTATTGACAATTCAATATCACATTAATGCCTGCTCTGGAATGCTAGGTGCAAGAATGATCATGCAAAATCCATGTTCCTACAATCCCATCCGTTAAGAAATACATGTCCTTCTGGAAAGTGTCAGTCAAAATTATCTGATTGTAAGTATGTAATTAAATTTAGATCCTGTCATCAGATTGGTGTCAAAGAGGTAAAGAGTACTTATAATGTGAAAATAGCGCCATCATATTTGTCATGGGATTTAAGTGAAGGTCAGAGTCACATACTGATTACTGAATGTCCAAGCTGTTATGTTCTTAAACAGAATGAGGTATTTTACAATCTTTGTAATCAGAGATTCCACATAATATAGCTGGATACGAACATAAGAACATACCAACATGAGGGGAATCACTCCACTTGATAACTTTAACATCAGTACCCAGTTCAATGAGACGCCTGGCAAAACCACAGACAACATGACATGGAGCAAGATCATCATCTTCAGAGCAAAGCATAAGAACAGGACCCAGCCCTGCTGATGAATATAGTGTGTGCCAGTACTCTGCACGCTGAGCTTCAATTCTGCTTGGGAATAGTGTGTCCATTCCAGATGCAAGGGCCTTTGTCATCCATGAAAGTAACATGGATGGTCGAGATGAGTTGCCAATCATAGGATTTTGGAGAAACTGGGTACCCACATCACTGAAAAAATCTACTGGGCCAGAGTCATAGATTTGCCCACAGATACAGTTTCTCACCAACCTATAGTCCTTCTGCATAATGAAAATTCTGTCAATAATAGATCAACCCTTTTGCCA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0333700.1 | 6 | 5784242 | A | G |
| Osa06LNT0333700.1 | 6 | 5784308 | A | C |
| Osa06LNT0333700.1 | 6 | 5784812 | G | C |
| Osa06LNT0333700.1 | 6 | 5784839 | A | G |
| Osa06LNT0333700.1 | 6 | 5785195 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0333700.1 | osa-miR7694-3p | Cleavage | 4.5 | 14.402 | 1 | 22 |
| Osa06LNT0333700.1 | osa-miR418 | Translation | 3.5 | 12.678 | 1 | 21 |
| Osa06LNT0333700.1 | osa-miR812a | Cleavage | 4.0 | 23.018 | 1 | 22 |
| Osa06LNT0333700.1 | osa-miR812b | Cleavage | 4.0 | 23.018 | 1 | 22 |
| Osa06LNT0333700.1 | osa-miR812c | Cleavage | 4.0 | 23.018 | 1 | 22 |
| Osa06LNT0333700.1 | osa-miR812d | Cleavage | 4.0 | 23.018 | 1 | 22 |
| Osa06LNT0333700.1 | osa-miR812e | Cleavage | 4.0 | 23.018 | 1 | 22 |
| Osa06LNT0333700.1 | osa-miR169r-3p | Translation | 4.5 | 21.367 | 1 | 21 |
| Osa06LNT0333700.1 | osa-miR1861b | Translation | 5.0 | 14.355 | 1 | 22 |
| Osa06LNT0333700.1 | osa-miR1861f | Translation | 5.0 | 14.355 | 1 | 22 |
| Osa06LNT0333700.1 | osa-miR1861g | Cleavage | 5.0 | 14.355 | 1 | 22 |
| Osa06LNT0333700.1 | osa-miR1861i | Translation | 5.0 | 14.355 | 1 | 22 |
| Osa06LNT0333700.1 | osa-miR1861l | Translation | 5.0 | 14.355 | 1 | 22 |
| Osa06LNT0333700.1 | osa-miR1861n | Cleavage | 4.0 | 14.355 | 1 | 22 |
| Osa06LNT0333700.1 | osa-miR2871a-3p | Cleavage | 3.5 | 11.185 | 1 | 21 |
| Osa06LNT0333700.1 | osa-miR2871b | Cleavage | 3.5 | 11.185 | 1 | 21 |
| Osa06LNT0333700.1 | osa-miR3980a-5p | Cleavage | 5.0 | 22.446 | 1 | 21 |
| Osa06LNT0333700.1 | osa-miR3980b-5p | Cleavage | 5.0 | 22.446 | 1 | 21 |
| Osa06LNT0333700.1 | osa-miR5072 | Translation | 4.5 | 22.498 | 1 | 22 |
| Osa06LNT0333700.1 | osa-miR5083 | Cleavage | 5.0 | 19.725 | 1 | 20 |
| Osa06LNT0333700.1 | osa-miR5496 | Cleavage | 5.0 | 11.796 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0333700.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0333700.1 | 6 | qRCRJ-6 | Physiological trait | Source activity | RM217 | RM402 |
| Osa06LNT0333700.1 | 6 | nan | Morphological trait | Seed | RG138 | RZ398 |
| Osa06LNT0333700.1 | 6 | nan | Morphological trait | Panicle/flower | RG138 | RZ398 |
| Osa06LNT0333700.1 | 6 | nan | Physiological trait | Source activity | RG138 | RZ398 |
| Osa06LNT0333700.1 | 6 | nan | Morphological trait | Panicle/flower | RG138 | RZ398 |
| Osa06LNT0333700.1 | 6 | nan | Physiological trait | Source activity | RG138 | RZ398 |
| Osa06LNT0333700.1 | 6 | nan | Morphological trait | Seed | RG138 | RZ398 |
| Osa06LNT0333700.1 | 6 | nan | Physiological trait | Eating quality | RM253 | RM162 |
| Osa06LNT0333700.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0333700.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0333700.1 | 6 | AsTol | Resistance or Tolerance | Other soil stress tolerance | RZ516 | RG213 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)