© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0334400.1
CAAGATCAAACTTGTACAACGTAACATTCAATATGTGGGCCATTTTTGGCTGAGTTTTTAGGCCTCCATGAAGACCTACTCCTACATGACAGCATGAATTTACAAGACAACACTCCACGCAGCACGGGCGTAGGAAAAAGTCACTTTCTGCTGGTTGTAGCTATCCTCCCTATTAAGCACCCAAATTATATGCTGGTAAAAACAAAAAACACAGCAAAAACTAGGAATTGAAACCTAGCATCCCCATTGTTCTCCCATTATTGGAGCATTACAAAATAAAACTCCGTACAGCTTGTGATTCGACTGTAATGGGAATCAAAATTCAAACTAGTATGAGTATCTCTTCCAATGGAACGAGCAATCTTCTGCCCTGCGCCTCCAAAATCACGGATCCCTGCAGCTGAATAATCATGATGACCGATGTCCAGGTTTTAAATCTCCAGAGAATTTATACGATGTGATGTCGCCAGATGTTCCTTGTGAAGCCTAGTTCACAGTCTTGGTCAGTAGCAGGTGAACCAGTACGAGGAAGCCAAGCCCAAGCAAGAAAGTTTGCCCCTTCATATTTTCAACTAGCTCCCACCAGTTTCCAGCTGAAAAGGAACTCTGTTCCTTCGTGGCTTCCTCTACTGCAAATTCTTCTAACAGGGCACGTTGACGTTCATTAACCATTGAGGGAAAATGTATTCGAAATCGGACATGTTGGTCCCCAAGATACCCAGCCTGGTTGGGCAATCCTTTACCCCTTAAAACTATAACCTGCCCTGGTTGAACTCCTTTGGGTATCTTAACTTCTGCTGTGCCATCTAAAGTCGGCACTTCAACTTTTCCACCAAGCATTGCCTGTGTGAAGCTAATCTTTTTGTCTACATGGATATCAGCACCATCACGAACAAACACTGGATCACTTGCTACTTGAAGCTTAATGTACAAACTTCCAGGTAGGGTTCCACGTCCACCACTATGTCCAGCCTCTGGTACATGAATTGTATCGCCAGAATCAACCCCTGCTGGAATGGTCACATTTACATATTTCATGCCATCTACCACCCCTGAACCTTTGCATGTCAGGCAGTAATCCTTAATTACTTTCCCAAAGCCTCTGCAAGAAGTACAAATGGATGTGAATGGGTTAATGGAAACTCTTCCTGCACCTCTACATGAAGGGCAAACATACATCTTTGCATTGGCCAAGTACCCTCTCCCATCACATGAGTCGCAAAGATTTTTTGCACTGAAGGAGACTTGCTTCATGCATCCTTTAACAGCATCTCTAAAGGAAAGATTCACCTCTACCTCAATATCGTTGGCATGTGCATCTACATCATGCTCAAAAACCTCGGAGAATATTTTGTAAAATTTACTGGAAAAAGGACCATTGTTTTGTCTGTAGAATTCTGCAAAGGGATTATGACCCTGCTTGTGGAATCCTGAAAATGGATCTTGATAGGCCCCATCAAAATCCATCCCACTCTTTGAGGAATTTGTCTCAGACCCTCTATAAAATAGCATATCATACTGCTCTCTCTTCGAAGGGTCGCGCAATGTCTCGTATGCATCTCTTATTTCCTGAAATGTCCTTTTTGCAGCAGTATTCCCCCTGTTTGTGTCTGGATGGTACCTTTTTGCAAGTGAATGAAAAGCCCTCTTGATTTCTTCCTGCGAAGCATCTTTAGGAACACCAAGAATCTTGTAATAGTCCTTCTCTGGTGAACTGTGTTGACCTGTAGCATGAAAAGACCTGCTCAATGTAAATGATGTCAACATGAACCGTCCATAGCATTTATCACCAATATAGATGCCACTGGAGCTGCAAGGCGTGGAATGCCGAATCCATTTGCTCCCCTGCGCAGCCACCTCGCCGGAGCGTAGCGCGAGAGACCTCGACGCGAGCCGGAGCCACCCCAGCCGTCCCATCCACGGCGGCGGCGGCGCACGCGGCGAACGGGCGGCTGGTCTTGCCCGTGGCCCGTGGAGCCTCGTGGAAGAAGCGCGAGGGGCAGAGGTCCCGAGCGCGAGAGAGTGGGAGGACGAGGAGGAGGAGGAGGATCGCGGAAGAAGCGGAGGGTTCGAGAAGATTCCAGAAGCAGCTCGAGCTGCCTCGACTAGTCGCCTCGGGAGAGAGGGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0334400.1 | 6 | 6036790 | A | G |
| Osa06LNT0334400.1 | 6 | 6042958 | A | G |
| Osa06LNT0334400.1 | 6 | 6037201 | A | G |
| Osa06LNT0334400.1 | 6 | 6037578 | C | T |
| Osa06LNT0334400.1 | 6 | 6038036 | T | C |
| Osa06LNT0334400.1 | 6 | 6038391 | A | G |
| Osa06LNT0334400.1 | 6 | 6039484 | C | T |
| Osa06LNT0334400.1 | 6 | 6039684 | G | C |
| Osa06LNT0334400.1 | 6 | 6041676 | T | G |
| Osa06LNT0334400.1 | 6 | 6041856 | G | A |
| Osa06LNT0334400.1 | 6 | 6042372 | C | T |
| Osa06LNT0334400.1 | 6 | 6042969 | A | C |
| Osa06LNT0334400.1 | 6 | 6043121 | C | T |
| Osa06LNT0334400.1 | 6 | 6044146 | A | C |
| Osa06LNT0334400.1 | 6 | 6044815 | T | C |
| Osa06LNT0334400.1 | 6 | 6045131 | G | C |
| Osa06LNT0334400.1 | 6 | 6046254 | G | A |
| Osa06LNT0334400.1 | 6 | 6036987 | A | G |
| Osa06LNT0334400.1 | 6 | 6042943 | A | G |
| Osa06LNT0334400.1 | 6 | 6044719 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0334400.1 | osa-miR5791 | Translation | 4.5 | 18.58 | 1 | 21 |
| Osa06LNT0334400.1 | osa-miR168a-5p | Cleavage | 5.0 | 21.675 | 1 | 21 |
| Osa06LNT0334400.1 | osa-miR169b | Cleavage | 4.5 | 16.41 | 1 | 21 |
| Osa06LNT0334400.1 | osa-miR169j | Cleavage | 5.0 | 16.41 | 1 | 21 |
| Osa06LNT0334400.1 | osa-miR169n | Cleavage | 4.5 | 16.41 | 1 | 21 |
| Osa06LNT0334400.1 | osa-miR414 | Translation | 4.5 | 18.176 | 1 | 21 |
| Osa06LNT0334400.1 | osa-miR419 | Cleavage | 4.5 | 15.528 | 1 | 21 |
| Osa06LNT0334400.1 | osa-miR1847.2 | Cleavage | 5.0 | 17.279 | 1 | 24 |
| Osa06LNT0334400.1 | osa-miR1883a | Translation | 5.0 | 21.571 | 1 | 24 |
| Osa06LNT0334400.1 | osa-miR1883b | Translation | 5.0 | 21.571 | 1 | 24 |
| Osa06LNT0334400.1 | osa-miR2872 | Cleavage | 4.5 | 19.509 | 1 | 21 |
| Osa06LNT0334400.1 | osa-miR5077 | Cleavage | 5.0 | 24.725 | 1 | 19 |
| Osa06LNT0334400.1 | osa-miR169a | Cleavage | 4.5 | 16.41 | 1 | 21 |
| Osa06LNT0334400.1 | osa-miR169c | Cleavage | 4.5 | 16.41 | 1 | 21 |
| Osa06LNT0334400.1 | osa-miR169f.1 | Cleavage | 5.0 | 16.41 | 1 | 21 |
| Osa06LNT0334400.1 | osa-miR169g | Cleavage | 5.0 | 16.41 | 1 | 21 |
| Osa06LNT0334400.1 | osa-miR169h | Cleavage | 5.0 | 16.41 | 1 | 21 |
| Osa06LNT0334400.1 | osa-miR169i-5p.1 | Cleavage | 5.0 | 16.41 | 1 | 21 |
| Osa06LNT0334400.1 | osa-miR169k | Cleavage | 5.0 | 16.41 | 1 | 21 |
| Osa06LNT0334400.1 | osa-miR169l | Cleavage | 5.0 | 16.41 | 1 | 21 |
| Osa06LNT0334400.1 | osa-miR169m | Cleavage | 5.0 | 16.41 | 1 | 21 |
| Osa06LNT0334400.1 | osa-miR1869 | Translation | 5.0 | 14.004 | 1 | 24 |
| Osa06LNT0334400.1 | osa-miR169e | Cleavage | 5.0 | 16.41 | 1 | 21 |
| Osa06LNT0334400.1 | osa-miR169o | Cleavage | 4.5 | 16.41 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0334400.1 | 6 | nan | Physiological trait | Eating quality | RM253 | RM162 |
| Osa06LNT0334400.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0334400.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0334400.1 | 6 | AsTol | Resistance or Tolerance | Other soil stress tolerance | RZ516 | RG213 |
| Osa06LNT0334400.1 | 6 | sd6 | Morphological trait | Panicle/flower | RG138 | RG64 |
| Osa06LNT0334400.1 | 6 | tns6 | Morphological trait | Panicle/flower | RG138 | RG64 |
| Osa06LNT0334400.1 | 6 | sd6 | Morphological trait | Seed | RG138 | RG64 |
| Osa06LNT0334400.1 | 6 | tns6 | Morphological trait | Seed | RG138 | RG64 |
| Osa06LNT0334400.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0334400.1 | 6 | qRCRJ-6 | Physiological trait | Source activity | RM217 | RM402 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)