© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0334900.1
GTCCAGTGAATCGAACAGAGTTGGATTGGTACTCATTTCTTTGTGCCACAACAAAACAGCATCCAGAGCTGTGACCAACTCTTGGGAAAATTCTGGTGTAAAAGAAGTCGTGATCTTCCACGAGTATCTGTGACAGGTATTCAAGTATAACTAGACATCTATGTGAATACCATGGCTGCAGCTAAATGTTTAAGCTCCAGTCATAGGGTTGATACAAGACTTTCAGTTGAGTGTTCGCAAGTAGTTCCAAGAATTGCTCCGACTCTGCTGGTTCCAGATAATTTGCCGCATGCTTCAGCACTTCCGTCTCGTTCTTACCAAAGTCTGTGCTATACCATCGCAAAATCTTGCTTACAGATGCAACCTTGGCTTCAGGATCAACAACAATTCCTACATTTCTTAGGAAATCACGTGCAGCTTCCACCAGTTCTTTATCGATGTTTCCTGGCGAGTAACACCTAAGTGCAGGTCCAGATTTGGTCCCACATACCAAAGCAAAGTGAACAAGAGGTTCAGCATATGGAAGGGCCACCTTGGATCTTTGGTCTTTCTGTCCAAAAGGCTTGGCAAGGTTGTATGGTGGCCTTTGGTTACCACGCAGTATGCCATTTTGAATAGCTGACATTGAATAAGCACATCCACCAATGACATACTTAAAATCTCCAAAGAACTTTCTCCTGTCCAATGGTCCAGCAGGATGACCACATGTCACTAATGCATGGATAGCCATCATATTGTAGAGATTTATGAAGAAAGCGAGCTTTTCTTCCCGTGATAACTCATGGGTTTCCACCCTCTGGAGCTCCTCAGTTGTTCTAACATACCTTTTAAATTCTTCACAACCCTGGATGCTTCTGTAGTCAACATGTTTACCATCTTCAGATACATAAGCTTCAAACATGGTTTCAGACAACTTTCTTAACCTTGATGCCACTTCAACAATTGGTTTCGGTTCAACATCAATGATACCCTTAGGGATGTTGTAGCACTGGCTCATAATTATGGGATCATTATCCAGGAAGCGATACAAGTGATTTCCATCTTCAAATACATCTTCGTCTAAAACATGGCGATAGAAATATTTGCTTGCAAGCTTTCTTCCAAATTCCACCGCCTCATCTCTCTCTAAATATTGATCTTCTGATAAGAAATCTACAGCTTCACTACCAAGAAAGCAGCTGCTAAATCTTCTCATTTTGTAAAATCTATCCTTCAGAGTGATTGACTCTCTCATTTTTCTGACAATGGTTGCCAACTCATCTATCTTCCCACTACCAGATTCATCATCTTCTCCAGGTAAGGGAGGCAACGGAGCAGCAGATGAGGGTTCATCTTTGAAAAGAGCATCAGTTCTGTCATCAAGAATGCCAGACTCCTCCATTTTCTTCAATTCAGTTAACCCTCCAATCAGCAAGTCATTGAAATACACTTTTGGTACTGTGGATGACCCAGTATTATTTTCTAGTTCCATCTTTCTACTGGGGAATATGTCGATGTTGATCTCAACATACTTGAGCATTTTCTGACGCATGAATGAGCGAACCATTTTGCAATCTTCACAACCCAGTTTTGTGTATATAATAATTCTTCCCTTCCCTGTTGGTTGCTCTATCAAATCTGGCACATTTTCATGCCCAGCTTCCCCAGTCATGAAGGTATCAAAATCTCGTCCGATTTTAATCAAGTTGAGTGGATTCCATGTAGTTCTCTCCTCAGATTTGGGCTGCACCTCTTTTGATTTAGGTTCAGCATCTGAGCCAATATTGCCACTACTGATGCTTTCTGATCCTTCATTCTTTTCATCTTCAACAGAAAATTCATTTTCGTCCTTTTTGCCAGAAAGGCGCCTTATAAATGTTGAAACTGCAATGGCACCCTTTTCCTTAACAAAATTCTTGATTGCAGTAGCTCTTTCATTGAGTACAGACCCATGGGCATCTGAATCAAGTTCCACAGATTGATTGGACGAACGCCTCAAATCTTCCATTTCAGCAACCTCAGTTCCATCAAAAACAGGTTCTTCAGATTTGTCTTCAGCAAGGATATCTTCCTCTGTCTGGCTTGAATCTGTAGGTTCCATTGGATCTGAGCTTCCTTCTTTATTCATCTTCTCATTGAATTCTTTTTGTGAATCATCTCTCACATGGATCTGTGCTTCTGAATCATTGCCTGAATTCTCATTTGAAGAATTTATTGCTTCTTTTGCATTCAGCATTTCTGTTCTCCTCAACAAATCCTCATCTTGATCCTTTTCTTCAGAATTGGTAGATCCTTCCGTGACAGCAACATTTTTCTCATCCTTGTCTCCATTCTCCATGATGCAGGATAAGCTTAACAGTCTACAAAAGAACGTTCAGTACTTCAGTGCACAGCCTGGAGCCGGGATCTCCGAGATCAGCACAAAACCAGAGAGAGAGGGGGGGAGGCCTAACCTAACCCAGGAGGGAGGAAGCGAGCGGGAGACGACGAAGGCGAAGGCGAAGACGACGCGGTGTTCGTCCCGGCTTCTAGAAGAAACTAGAAGAAGAGATGGGGGGGTTTTGATTTTGATTTTTGATTTGGGGGGGGAGGCGACGACGAGCGGTGGCGGCGGCGGAGTGGAGAGAGTGGAGACGGACCAAGACC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0334900.1 | 6 | 6442110 | C | A |
| Osa06LNT0334900.1 | 6 | 6440707 | A | G |
| Osa06LNT0334900.1 | 6 | 6441811 | A | G |
| Osa06LNT0334900.1 | 6 | 6441854 | C | T |
| Osa06LNT0334900.1 | 6 | 6442634 | A | G |
| Osa06LNT0334900.1 | 6 | 6442853 | T | C |
| Osa06LNT0334900.1 | 6 | 6442924 | A | C |
| Osa06LNT0334900.1 | 6 | 6443066 | A | G |
| Osa06LNT0334900.1 | 6 | 6443861 | C | T |
| Osa06LNT0334900.1 | 6 | 6444285 | A | G |
| Osa06LNT0334900.1 | 6 | 6445592 | A | G |
| Osa06LNT0334900.1 | 6 | 6446151 | T | A |
| Osa06LNT0334900.1 | 6 | 6446369 | A | C |
| Osa06LNT0334900.1 | 6 | 6446904 | A | G |
| Osa06LNT0334900.1 | 6 | 6446142 | T | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0334900.1 | osa-miR5826 | Translation | 4.5 | 17.355 | 1 | 24 |
| Osa06LNT0334900.1 | osa-miR6248 | Cleavage | 3.5 | 16.235 | 1 | 21 |
| Osa06LNT0334900.1 | osa-miR396a-3p | Translation | 3.0 | 14.882 | 1 | 20 |
| Osa06LNT0334900.1 | osa-miR396b-3p | Translation | 3.0 | 14.882 | 1 | 20 |
| Osa06LNT0334900.1 | osa-miR396c-3p | Cleavage | 4.5 | 13.1 | 1 | 21 |
| Osa06LNT0334900.1 | osa-miR159d | Translation | 4.5 | 15.566 | 1 | 21 |
| Osa06LNT0334900.1 | osa-miR444b.1 | Translation | 4.5 | 23.66 | 1 | 21 |
| Osa06LNT0334900.1 | osa-miR444c.1 | Translation | 4.5 | 23.66 | 1 | 21 |
| Osa06LNT0334900.1 | osa-miR1442 | Cleavage | 3.0 | 14.606 | 1 | 20 |
| Osa06LNT0334900.1 | osa-miR1860-3p | Translation | 4.0 | 13.967 | 1 | 22 |
| Osa06LNT0334900.1 | osa-miR1860-3p | Translation | 5.0 | 9.492 | 1 | 22 |
| Osa06LNT0334900.1 | osa-miR1860-3p | Cleavage | 5.0 | 10.349 | 1 | 22 |
| Osa06LNT0334900.1 | osa-miR1861n | Cleavage | 3.5 | 17.875 | 1 | 22 |
| Osa06LNT0334900.1 | osa-miR1320-5p | Cleavage | 5.0 | 9.769 | 1 | 21 |
| Osa06LNT0334900.1 | osa-miR5497 | Cleavage | 3.5 | 17.036 | 1 | 21 |
| Osa06LNT0334900.1 | osa-miR5524 | Cleavage | 5.0 | 11.951 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0334900.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0334900.1 | 6 | S5 | Physiological trait | Sterility | RG213 | C235 |
| Osa06LNT0334900.1 | 6 | nan | Physiological trait | Eating quality | RM253 | RM162 |
| Osa06LNT0334900.1 | 6 | nan | Morphological trait | Panicle/flower | RM276 | RM121 |
| Osa06LNT0334900.1 | 6 | nan | Physiological trait | Source activity | RM276 | RM121 |
| Osa06LNT0334900.1 | 6 | spf6 | Physiological trait | Sterility | RG213 | RM557 |
| Osa06LNT0334900.1 | 6 | qGT-6 | Physiological trait | Eating quality | RM276 | RM121 |
| Osa06LNT0334900.1 | 6 | nan | Physiological trait | Eating quality | RM276 | RM549 |
| Osa06LNT0334900.1 | 6 | nan | Physiological trait | Eating quality | RM276 | RM549 |
| Osa06LNT0334900.1 | 6 | nan | Physiological trait | Eating quality | RM276 | RM549 |
| Osa06LNT0334900.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0334900.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0334900.1 | 6 | sd6 | Morphological trait | Seed | RG138 | RG64 |
| Osa06LNT0334900.1 | 6 | sd6 | Morphological trait | Panicle/flower | RG138 | RG64 |
| Osa06LNT0334900.1 | 6 | tns6 | Morphological trait | Panicle/flower | RG138 | RG64 |
| Osa06LNT0334900.1 | 6 | tns6 | Morphological trait | Seed | RG138 | RG64 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)