© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0335300.1
AACTCAGATTGATTTTTAATACAAAGCCAAAGAGACTGACACGAACACATAACATATTTTTGCCGCTATCGATCGCCAGCTGATTATACCAGCGAGAGAAAGCGTACGTACATACGCACGTAGGCGCAGGGAAGAGAGGAAAAAAAAAAGACAAATACGCACGTACGTATAGTACACGGTACATGTATACACGTATAGCTAGCTCAAGCTCTCTCTTCTTCTTCAAGCAGAGCGGGCCCACGTACACACAGCACCACCACACGTACACAGACACCGTACACATTACATTTCGACTTGGTAGAGTCGTCGATCGTACAAACAATGGCTTCCCGCGCTCGTGCACGTGCGTACGTACGTACGCGTGCAGTACATACATACATATGTATATACGTATACAGTATAGCAGTACGGTGTGGGTCCATGGCGTCAGGGCGATTAGACGTTGTCGAACTCGTCGGCGGCCATGGACTGGCTCTGCAAGCGGCGGAGCTTGAAGGAGGAGAGCTTCTGGGGGGCGGCGCCGCCGGCGGCGGCGGGGGCCTCCTCGAAGCGGATGTAGGTGTAGACCCATGCGCCGGAGAGGGTGCCGACGACGGGGCCGAGGAAGTAGATCCAGAGGCCGGTGTAGACGTTGCTGGCCACCGCCGGCGCCAGCGTCCTCGCCGGGTTCATCGATCCTCCTGACACCGGCCTGCAATTTCCACTCGCGTCGTATTTCGCCGCGTCTTAATCAGCTATACATCCCCATTAATCAACACATACTGATCTTTTTCACTACTCGTCTCTACTTTATACTATGGTTAATTACCCCTTTTCTTATTTTATATATTTTTTAGAAGTTTTTTTAGTTTCAGTCAGTACATGCAAGTTGTGTCCTTGTAGTGATACGGTCAGGAATAATGTGTGTGAGTGTTAGGAGGTCCAAAGAATGGTTTGTACAGGCTAATCAGGAGTCCATGTTAGCAACGTCGTTTTGTGAAGTACATAATTAAACAGTAGCTTAATGGCTGATCGATGTGAGAGACATAGCTAGCTTGGTGCATGTGCCTTGAACCTAACTATCTAAGTACTGTGTATACTAATATAAGTCATCTGAGTCCGGCTCTGCTCTACGTCAGTCTGTGTGTGACACCTTGTTATAAATATGGCGCTTTAAATTCTCTGTAGAAAAAAAAATAATTATGTGGGCTGAACAACGAAGATTCTACCAAAGAATGTCGTCAGCTAAGCTAGATTTTCCAGAGGTTTGTTGAAAAGCCACGATGGTTAGCTATTACCCACTACATGCAGCGTACTAGTGGTTACTAAAATATTTTGATTACGGTTAATTAAATAACTAATCCGGTGCTAGTTAATTCTTCCCAAGTTTAGGGGTGGTCATTAGTAATCGATTCATTAATTACCCTGCGAAGATCGACGTAATGCAAACCGCGGAACCGACTGCTAACCCCGCCAACTCACCCACCGCTCTGGAGTCGGTGGCAACGGCGCAGGTGACGAACATCATGTTGAAGGTGACGACGATCTCGATGACGAGGGCGTGCCAGTGCGGCCCCGTCGGCGTCGTCGTCCCCAACACCTCGATCGGGTACAGCACCGCCCGCAGCACGAACGCCGCGCACATCGCCCCCGTGAACTGCGCCGCCCAGTAGAACGGCACCTGAATCCAGGGGAAATGCCGGAAGAAGGCGAAGGAGAGGGTGACGGCCGGGTTCATGTGGGCGCCGGAGATGTGGCCGGTGGCGTAGATCATGACGGTGACGATGAGGCCACCGACCACCGACTGCCCCAGCTGCGAGATGCGCTTCATGTCCTCGCCGTAGATGGACGCCGCCCCGCACGTCACGAACACAAGCAGGAACGTCGCCACCACCTCCGATATCACCTTCTTGAGGAGGTTAGGAGGGAAGATGTCGGCGAAGGATTTCTCGGGGTAGTAGACGCTGGGGACGGCGGAGACGCTCTGCACGGTGGAGAGGTCATGGATCTCGTTCGAGTAGTTCACCCGAGAGTTGGTCCTCGACGGCGCTGTCGTCGATGCCATGGCCCCCCTTTAGCTATCTATCTAGGACAACGAATCAACGGACCAGCGCGAGCGAGCGATCGAGAGTACTGTGAGCGCTAGCTGCCGATCGATCGATGGAAGAACGATCAAGCTGTGCTGCCTCTGCCTCTGCTTCTGCTTTGCTACTGCTGCTTGCCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0335300.1 | 6 | 6649467 | A | G |
| Osa06LNT0335300.1 | 6 | 6649102 | T | C |
| Osa06LNT0335300.1 | 6 | 6649455 | T | A |
| Osa06LNT0335300.1 | 6 | 6649503 | A | G |
| Osa06LNT0335300.1 | 6 | 6649956 | A | T |
| Osa06LNT0335300.1 | 6 | 6650514 | T | A |
| Osa06LNT0335300.1 | 6 | 6651546 | T | C |
| Osa06LNT0335300.1 | 6 | 6651922 | T | A |
| Osa06LNT0335300.1 | 6 | 6650678 | G | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0335300.1 | osa-miR7694-5p | Cleavage | 3.5 | 12.994 | 1 | 24 |
| Osa06LNT0335300.1 | osa-miR162a | Cleavage | 5.0 | 20.79 | 1 | 21 |
| Osa06LNT0335300.1 | osa-miR171a | Translation | 4.5 | 9.282 | 1 | 21 |
| Osa06LNT0335300.1 | osa-miR396a-3p | Translation | 4.0 | 20.932 | 1 | 20 |
| Osa06LNT0335300.1 | osa-miR396b-3p | Translation | 4.0 | 20.932 | 1 | 20 |
| Osa06LNT0335300.1 | osa-miR530-3p | Cleavage | 3.0 | 21.294 | 1 | 21 |
| Osa06LNT0335300.1 | osa-miR810b.2 | Cleavage | 5.0 | 11.747 | 1 | 21 |
| Osa06LNT0335300.1 | osa-miR1847.1 | Cleavage | 4.5 | 20.345 | 1 | 21 |
| Osa06LNT0335300.1 | osa-miR1850.3 | Cleavage | 4.5 | 12.514 | 1 | 22 |
| Osa06LNT0335300.1 | osa-miR530-3p | Cleavage | 4.5 | 18.152 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0335300.1 | 6 | nan | Physiological trait | Eating quality | RM276 | RM549 |
| Osa06LNT0335300.1 | 6 | nan | Physiological trait | Eating quality | RM276 | RM549 |
| Osa06LNT0335300.1 | 6 | nan | Physiological trait | Eating quality | RM276 | RM549 |
| Osa06LNT0335300.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0335300.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0335300.1 | 6 | tns6 | Morphological trait | Panicle/flower | RG138 | RG64 |
| Osa06LNT0335300.1 | 6 | sd6 | Morphological trait | Panicle/flower | RG138 | RG64 |
| Osa06LNT0335300.1 | 6 | qPGWC-6b | Physiological trait | Eating quality | R2147 | C1478 |
| Osa06LNT0335300.1 | 6 | qNPB6-1 | Morphological trait | Panicle/flower | RZ667 | R2147 |
| Osa06LNT0335300.1 | 6 | sd6 | Morphological trait | Seed | RG138 | RG64 |
| Osa06LNT0335300.1 | 6 | tns6 | Morphological trait | Seed | RG138 | RG64 |
| Osa06LNT0335300.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0335300.1 | 6 | S5 | Physiological trait | Sterility | RG213 | C235 |
| Osa06LNT0335300.1 | 6 | acl(t) | Physiological trait | Eating quality | nan | nan |
| Osa06LNT0335300.1 | 6 | alk(t) | Physiological trait | Eating quality | nan | nan |
| Osa06LNT0335300.1 | 6 | gel(t) | Physiological trait | Eating quality | nan | nan |
| Osa06LNT0335300.1 | 6 | spf6 | Physiological trait | Sterility | RG213 | RM557 |
| Osa06LNT0335300.1 | 6 | qET-6 | Physiological trait | Eating quality | R2147 | C1478 |
| Osa06LNT0335300.1 | 6 | nan | Physiological trait | Eating quality | RM253 | RM162 |
| Osa06LNT0335300.1 | 6 | nan | Morphological trait | Panicle/flower | RM276 | RM121 |
| Osa06LNT0335300.1 | 6 | nan | Physiological trait | Source activity | RM276 | RM121 |
| Osa06LNT0335300.1 | 6 | qGT-6 | Physiological trait | Eating quality | RM276 | RM121 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)