© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0336300.1
GTTAAGACAGATCAATAACTGTAAAAGGCACTTGACTTTCACTCCAGATGTTCCCATTAAGACAAGCCTCTCAGGTTAACTTGACAGAGTGCATTGCAACCTAACCAAAGATCAAATCAAATGATTCGCAGTACTAAACTTCGTGTAAAGCAAGAAGCAAACTGCCCAGCTGCTCCATCACATCACATGGCAGCACATTGCTCTACTCCAAAGCATACGGTACCAAATGTGCATCAAGGTCCAGTACGTTGTCAATCAAGATTTTCAAAAGCGACTACAGTTAAGTTTAGTACTGAAACCTGGTTGCACAATTGCCCGTCCCATTGGGGCAGGTGGGGTGGCGAGACTCAGATGGGATTGCACTGATGGTGACCGAGAACATATGCTGAATCTAAGTGACATACCAGAATCTTTAGCTCACCGTCAGCCACTGCTTGCCTGGAAATCACAAGCCTCCTTGTCAGGCACAAGACATCATGTGCACCAGAAAAGTCGAGGATACCTGGTGCATACAATTGGTTTTGGTTGTGGTCTGTTGGTGCCTTTTTCTCTGTTTAGCGCACTTTAGAGCAAAAATGTTAGGATTCCTTTGGTCAGTGTAATCAATGAGATATGTATCGATTAAGTCGATATTCCCCCAGTGTTTTGCTTCTCATCCAAAGTTCCAAACTAAATTCCCTAGCTAGTGTCACTTACATGGTAGAAATGAGTTCATATCATACAACTGAAGCCTGGAAGCTCTCTAGTCTCTACTGATAAAACAAGAAACCGAACCTGAGGTTTCCATCAGATGAGACATTTCAGCGCATAAATCCTTTTACCATTAGCATTGTTGGGAGGTTATGACACCACCTTCAGAAAATATCAATAACCACAAACAATTCCTTGGCTATTGGCCTATTGCTTCATCTTTTCTTCAGTGCAACAATAACTTGCTAGGGGGCACATAGAATTTGAACCGGTGGTTTTCTGGCCTCCTAACTTTTTGGAACATGATTGACAGAGCTTTCCATGAGTTACAAATAGACAATTCAGATCAAATTTTAGATCATCAGGAATTTTGCTGTTCAGATGAAGATATGCCCTCTCTCTGCTAGCTGTTGCAGGAACCCAACCAATAGCGTTTGTAATACGGAGTACATGAGTATCTACTGGAAAATCATCCTTCTGAAGATAGAACATCAGCACACACGCCACAGTCTTTGGCCCGATCCCTTTGAACCGAGATAGCTCAGTCTTCACCTCATCCACGGACAGATCCCGCAAATACTCGAGGCAAATCTTGCCTCGCCTCTCCCGGACGCCCCTCAGCATCGCCCTTATCCTCGCCGCCTTCGTCGCCGCAAGCCCCCCGCACCGGATGGCGTCCTCCAGCCTCTTCCCCTCCTCCTCATCCACCACCTGGTCCCAGGTGGGGAACGCGGCCTTGAGGGCGGCGAAGGCGCGGCGCGAGATGGCGTCGGTGGTGTTCTGAGAGAGGAGGGTCGTGACGAGGCCGTCGAGGACGGTGGGCGGCGGAGACGGATCGCCATCCGTGTCCTCCTCCGGGTCCGGGGATGTGTCGAGGCCGAGGCGGCGGCGGCGGCGGCGGAAGGGCGCGAACTCGTCGGGGAAGCCGTGGAAGGCGAGGAGGGCGTCGCGGACGGCGAGGCATTGGGCGGGGGAAGGGGAGGGGTGGTCGTGGTACGGCTCCGGCGAGGGCGGAGGCTTCCGCTTGGGCTTCCGGGTCATCTCGCTGGCCTGCGCGGCTTGGCCGGCGGCGCCGTGGAGGTGGCGGTTGCCGGCGACGAGGTGTGGTGTGGGCGTGTGGCCGTCAATAGGTGAACAAATGGGCCGAACGTCATGGCCCGGCCCAGCCACGATTAGGCATGGCTCCTGTAGCGGGCCGTACCGTGCAGGCCCATGTGCTAAGGCGTCGGCCCAAGCACGGTCCATGGAAAATACGGGCAGTGCCGGCACGGGCCCAAATATGACATGTGGGCCGGTATAGGCCCATTATCACGTTTGGCCCACAGAATTTGAATACGAGGCCGAAAAAAGAGAAATAAGATAAAAAGGAAAATTAAAAGAAAAAAAAAGAAAGGACCTGTTTACTTTGATGAAAAAAACCTTACCAAAATTTGCCAAAAATTTTGGCAGGATTTCTTATATAGTTACCAAATTTGGTAGCAAACTAAATGTATCCACTATTTTGGCAACTTTATTAAAATTTGGTAAGGTTGAAAATGTCATCAAAGTGAACAGGCCTAAAATTATGGGGAAAAACTAGAAAAAATGACAAAAATAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0336300.1 | 6 | 7169839 | G | A |
| Osa06LNT0336300.1 | 6 | 7169909 | C | T |
| Osa06LNT0336300.1 | 6 | 7170333 | T | A |
| Osa06LNT0336300.1 | 6 | 7171150 | A | G |
| Osa06LNT0336300.1 | 6 | 7172238 | A | G |
| Osa06LNT0336300.1 | 6 | 7172264 | T | C |
| Osa06LNT0336300.1 | 6 | 7172545 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0336300.1 | osa-miR5179 | Translation | 4.5 | 14.188 | 1 | 21 |
| Osa06LNT0336300.1 | osa-miR395u | Translation | 5.0 | 17.656 | 1 | 21 |
| Osa06LNT0336300.1 | osa-miR396a-5p | Cleavage | 5.0 | 22.74 | 1 | 21 |
| Osa06LNT0336300.1 | osa-miR396b-5p | Cleavage | 5.0 | 22.74 | 1 | 21 |
| Osa06LNT0336300.1 | osa-miR396c-5p | Cleavage | 5.0 | 22.74 | 1 | 21 |
| Osa06LNT0336300.1 | osa-miR398a | Translation | 4.5 | 18.154 | 1 | 21 |
| Osa06LNT0336300.1 | osa-miR166h-5p | Cleavage | 4.0 | 14.93 | 1 | 21 |
| Osa06LNT0336300.1 | osa-miR1438 | Cleavage | 4.5 | 14.408 | 1 | 22 |
| Osa06LNT0336300.1 | osa-miR1850.1 | Cleavage | 4.5 | 18.099 | 1 | 21 |
| Osa06LNT0336300.1 | osa-miR1866-5p | Cleavage | 4.5 | 21.374 | 1 | 24 |
| Osa06LNT0336300.1 | osa-miR1862d | Cleavage | 4.5 | 18.522 | 1 | 24 |
| Osa06LNT0336300.1 | osa-miR1876 | Cleavage | 5.0 | 15.424 | 1 | 24 |
| Osa06LNT0336300.1 | osa-miR1878 | Cleavage | 5.0 | 17.009 | 1 | 24 |
| Osa06LNT0336300.1 | osa-miR2873a | Translation | 5.0 | 12.964 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0336300.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0336300.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0336300.1 | 6 | qPSP-6 | Physiological trait | Flowering | R2171 | RZ144 |
| Osa06LNT0336300.1 | 6 | qPHw6-2 | Resistance or Tolerance | Other soil stress tolerance | RG424 | RZ667 |
| Osa06LNT0336300.1 | 6 | qSFWd6 | Resistance or Tolerance | Other soil stress tolerance | RG424 | RZ667 |
| Osa06LNT0336300.1 | 6 | sd6 | Morphological trait | Panicle/flower | RG138 | RG64 |
| Osa06LNT0336300.1 | 6 | tns6 | Morphological trait | Seed | RG138 | RG64 |
| Osa06LNT0336300.1 | 6 | tns6 | Morphological trait | Panicle/flower | RG138 | RG64 |
| Osa06LNT0336300.1 | 6 | sd6 | Morphological trait | Seed | RG138 | RG64 |
| Osa06LNT0336300.1 | 6 | gp6 | Morphological trait | Panicle/flower | RZ667 | RG424 |
| Osa06LNT0336300.1 | 6 | S5 | Physiological trait | Sterility | RG213 | C235 |
| Osa06LNT0336300.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Osa06LNT0336300.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0336300.1 | 6 | nan | Resistance or Tolerance | Blast resistance | C1478 | R2171 |
| Osa06LNT0336300.1 | 6 | qGY6-1 | Morphological trait | Seed | RZ667 | RG424 |
| Osa06LNT0336300.1 | 6 | qRS6-1 | Morphological trait | Shoot/Seedling | RZ667 | RG424 |
| Osa06LNT0336300.1 | 6 | qLVBTL6-1 | Morphological trait | Panicle/flower | RZ667 | RG424 |
| Osa06LNT0336300.1 | 6 | qLVBSL6-1 | Morphological trait | Panicle/flower | RZ667 | RG424 |
| Osa06LNT0336300.1 | 6 | qHD-6-1 | Physiological trait | Flowering | RG424 | RZ667 |
| Osa06LNT0336300.1 | 6 | qSL6-1 | Morphological trait | Culm/leaf | RZ667 | RG424 |
| Osa06LNT0336300.1 | 6 | qTL6-1 | Morphological trait | Culm/leaf | RZ667 | RG424 |
| Osa06LNT0336300.1 | 6 | nan | Resistance or Tolerance | Lodging resistance | C1478 | R2171 |
| Osa06LNT0336300.1 | 6 | nan | Morphological trait | Panicle/flower | RM276 | RM121 |
| Osa06LNT0336300.1 | 6 | nan | Physiological trait | Source activity | RM276 | RM121 |
| Osa06LNT0336300.1 | 6 | nan | Physiological trait | Eating quality | RM253 | RM162 |
| Osa06LNT0336300.1 | 6 | qPH2-6-1 | Morphological trait | Dwarf | RG424 | RZ667 |
| Osa06LNT0336300.1 | 6 | qTN2-6-1 | Morphological trait | Culm/leaf | RG424 | RZ667 |
| Osa06LNT0336300.1 | 6 | spf6 | Physiological trait | Sterility | RG213 | RM557 |
| Osa06LNT0336300.1 | 6 | qGT-6 | Physiological trait | Eating quality | RM276 | RM121 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)