© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0336500.1
ATTTGTATATATATGTTGAAGTTCATTTTGCAAATTAACCTATAGATACTTGCCGAGGCAAATCAATATAGCCAAGTAACCAAACACCATATATAGCTAAACAATGGAGAAACAATCCATTTAGCTAGAGTTTTACAGAATATGAGCATTATGCAATATTGCAAATGGTTGAAAGGAGGGAAACAAAACCACACAAGTGTTCTTATTACGATATATGTCACCATATTGTGTTTGATCTCTTTAAAAGCATCTCGTAATTAAGAGAGAGGACATTCATGGACCACACGTGCTACTATATTTTCTTCAAGGACATGACGATGACGGCATACTTTGTCTTCTCCCTCTCAAGGTGTTGGGCCACAAGGGGTCTAAACTCTTGAAACAACACGTCAAGTATGCTTTCTCCAAAATGACTTGCTATCAAAGACTCCAGCACAGATCTAATGCCCGTAGTGATATTTTGGCTACTGCTGGCAATGTCATGAACAACGTCATCTACTGAATCGTCATAAGGATCCCAGTTTGCCTCAAAGAGTTTCATGTGAACCAAGTCAAACATATGGCTTTCCATAACTATTTCCATTACTTCGTCATCTGATGGCCCATAGATAGGTAGGTTGAAGGATTCCAACTTTTCCTTGTTCACAAGGCCCTTGCAAACAAGTGATTCTAGTGACTTTGCGACACATCCCAAAATATGGCTGAGACTTCCATTGTATACATCCTCATCCTTCCGTCCAAAAAATATTAGCACCATGTGTCCATCGTTTACTAGTTCTTCATGGCGGAGCTTGAGGAAAAGGGAAAAGTCCTTTCGAAACTGTTCTTTGAATAATTTCACTACTAATGGTGTTGTGGTGGAGCTGATGTATATGTTGTCCTTATTTGAGAGAGATTTTCCACCAGCCTCTAGTCCCTCTGGCACCTGGGAGCGCCAATGAAGACAATACGAGGAGTGGAAGAGATGAACACTCTGACGAGGGAAAAGTCTAGAGTAATATGATTTTGGCAAACCGGATATGTAGTATGATGGAAGCGAATCTCCCTTGTGATACATCGTAGTTGAGGTCTTGATCTTTTCGAGTGATCGAAAGAGTTGGTTGAAATCATTACCTGGTAAGTCATTTAGGAAGAACTGAAGTTCGATAGGATCATGTTCATCCAACTTAGTACAGTGGTCTGCTATGATGTTGATGACATTGGACATGAAGAACATCGTATTTGGTCCTGCAGAGCAACCTAAGTCTGCAATGACCATAGTTTTGGGGAGAATAGCCTTGTACACTTCTATTATAGCTTTCTCGATGACTGGCTTAGTTTCATCTATAACAATTGTCTAGCAATGAGCAGAAAAGAAAATTTTGAGCTCTTAATCATGATATAGACACGTTATATGGTGTTATACAATGTCGACCTATGTCTAATGCATGTATATCTTGTATAGTATGTAGATGCTAGGTTAATATTATCAATAACTGACAGATATATCCATTCTTCTAAACAAATTTCTCCAGTACTACGAATAGTTATGGCTAATTGTTAATTGCAGCACATATATATTTTCTGTGAGGATAATTAATTAAGAGACGACAGAGATTCGTGCTTTTCAGCAGAAAAGAAGATGCAGAGAAAATAATTATTATACGAGGAAAAGCTAATTGTTATATATATTTGATAAATCACAATAAACATAATTTACCAAGGTAAACCAAACACGTCATGATGTTGTTATTTGTACACATATATGTAACCTGACAGCCAAAAAATAAAATAAAACGAAGAGCAATATAATCACCTGACGCCTGGAGTACTTGGCATAGCTACCTTCTCCTTCCCCACTGGTCATGTGTAAATCGCCTTCGATATTGACCATGGCTTGTCTTGGATTATTAGATATGTGGGTCTTTGAGTAGCAACAATAAGCACAATATTAATGCAACTCAAGTGTGGGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0336500.1 | 6 | 7406057 | T | A |
| Osa06LNT0336500.1 | 6 | 7408405 | A | T |
| Osa06LNT0336500.1 | 6 | 7407527 | A | G |
| Osa06LNT0336500.1 | 6 | 7407196 | T | C |
| Transcript ID | Transposon ID | Chromosome | Strand | Start | End | Counts |
|---|---|---|---|---|---|---|
| Osa06LNT0336500.1 | DTM_#DNAt_MULE_japo_Os0098 | Chr6 | - | 7407191 | 7407554 | 363 |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0336500.1 | osa-miR5536 | Cleavage | 5.0 | 20.475 | 1 | 22 |
| Osa06LNT0336500.1 | osa-miR5536 | Cleavage | 5.0 | 18.35 | 1 | 22 |
| Osa06LNT0336500.1 | osa-miR5179 | Cleavage | 4.5 | 12.418 | 1 | 21 |
| Osa06LNT0336500.1 | osa-miR6245 | Cleavage | 5.0 | 16.228 | 1 | 21 |
| Osa06LNT0336500.1 | osa-miR408-5p | Cleavage | 5.0 | 20.954 | 1 | 21 |
| Osa06LNT0336500.1 | osa-miR439a | Translation | 4.0 | 16.449 | 1 | 21 |
| Osa06LNT0336500.1 | osa-miR439b | Translation | 4.0 | 16.449 | 1 | 21 |
| Osa06LNT0336500.1 | osa-miR439c | Translation | 4.0 | 16.449 | 1 | 21 |
| Osa06LNT0336500.1 | osa-miR439d | Translation | 4.0 | 16.449 | 1 | 21 |
| Osa06LNT0336500.1 | osa-miR439e | Translation | 4.0 | 16.449 | 1 | 21 |
| Osa06LNT0336500.1 | osa-miR439f | Translation | 4.0 | 16.449 | 1 | 21 |
| Osa06LNT0336500.1 | osa-miR439g | Translation | 4.0 | 16.449 | 1 | 21 |
| Osa06LNT0336500.1 | osa-miR439h | Translation | 4.0 | 16.449 | 1 | 21 |
| Osa06LNT0336500.1 | osa-miR439i | Translation | 4.0 | 16.449 | 1 | 21 |
| Osa06LNT0336500.1 | osa-miR396e-3p | Cleavage | 4.0 | 19.884 | 1 | 24 |
| Osa06LNT0336500.1 | osa-miR1862a | Cleavage | 4.0 | 13.109 | 1 | 24 |
| Osa06LNT0336500.1 | osa-miR1862b | Cleavage | 4.0 | 13.109 | 1 | 24 |
| Osa06LNT0336500.1 | osa-miR1862c | Cleavage | 4.0 | 13.109 | 1 | 24 |
| Osa06LNT0336500.1 | osa-miR396f-3p | Cleavage | 4.5 | 19.884 | 1 | 24 |
| Osa06LNT0336500.1 | osa-miR1862f | Cleavage | 4.5 | 13.109 | 1 | 20 |
| Osa06LNT0336500.1 | osa-miR1862g | Cleavage | 4.5 | 13.109 | 1 | 20 |
| Osa06LNT0336500.1 | osa-miR5071 | Translation | 4.5 | 15.262 | 1 | 21 |
| Osa06LNT0336500.1 | osa-miR5514 | Translation | 5.0 | 19.731 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0336500.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0336500.1 | 6 | qPSP-6 | Physiological trait | Flowering | R2171 | RZ144 |
| Osa06LNT0336500.1 | 6 | qPHw6-2 | Resistance or Tolerance | Other soil stress tolerance | RG424 | RZ667 |
| Osa06LNT0336500.1 | 6 | qSFWd6 | Resistance or Tolerance | Other soil stress tolerance | RG424 | RZ667 |
| Osa06LNT0336500.1 | 6 | sd6 | Morphological trait | Panicle/flower | RG138 | RG64 |
| Osa06LNT0336500.1 | 6 | gp6 | Morphological trait | Panicle/flower | RZ667 | RG424 |
| Osa06LNT0336500.1 | 6 | tns6 | Morphological trait | Seed | RG138 | RG64 |
| Osa06LNT0336500.1 | 6 | tns6 | Morphological trait | Panicle/flower | RG138 | RG64 |
| Osa06LNT0336500.1 | 6 | sd6 | Morphological trait | Seed | RG138 | RG64 |
| Osa06LNT0336500.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Osa06LNT0336500.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0336500.1 | 6 | S5 | Physiological trait | Sterility | RG213 | C235 |
| Osa06LNT0336500.1 | 6 | nan | Resistance or Tolerance | Blast resistance | C1478 | R2171 |
| Osa06LNT0336500.1 | 6 | qLVBSL6-1 | Morphological trait | Panicle/flower | RZ667 | RG424 |
| Osa06LNT0336500.1 | 6 | qGY6-1 | Morphological trait | Seed | RZ667 | RG424 |
| Osa06LNT0336500.1 | 6 | qRS6-1 | Morphological trait | Shoot/Seedling | RZ667 | RG424 |
| Osa06LNT0336500.1 | 6 | qTN2-6-1 | Morphological trait | Culm/leaf | RG424 | RZ667 |
| Osa06LNT0336500.1 | 6 | qLVBTL6-1 | Morphological trait | Panicle/flower | RZ667 | RG424 |
| Osa06LNT0336500.1 | 6 | nan | Physiological trait | Eating quality | RM253 | RM162 |
| Osa06LNT0336500.1 | 6 | nan | Morphological trait | Panicle/flower | RM276 | RM121 |
| Osa06LNT0336500.1 | 6 | nan | Physiological trait | Source activity | RM276 | RM121 |
| Osa06LNT0336500.1 | 6 | qHD-6-1 | Physiological trait | Flowering | RG424 | RZ667 |
| Osa06LNT0336500.1 | 6 | qPH2-6-1 | Morphological trait | Dwarf | RG424 | RZ667 |
| Osa06LNT0336500.1 | 6 | qSL6-1 | Morphological trait | Culm/leaf | RZ667 | RG424 |
| Osa06LNT0336500.1 | 6 | qTL6-1 | Morphological trait | Culm/leaf | RZ667 | RG424 |
| Osa06LNT0336500.1 | 6 | nan | Resistance or Tolerance | Lodging resistance | C1478 | R2171 |
| Osa06LNT0336500.1 | 6 | qGT-6 | Physiological trait | Eating quality | RM276 | RM121 |
| Osa06LNT0336500.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)