© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0336800.1
CTGCAATTACTGTGTACGTGGATGATATTTGACCTACCATTAGCCCCTTGTGACACGTTGAAGCCATAAAGCAAACCTACGACCACTTCAGGGTTTATACTTTAGTTAGACAAGGGGAGAGATTATTGTGACTTGTACAACTCGATCTCTGCCTGCCCGCCATGGATTTCAATGCTCCCAGTGCTGCATGGCTGGACAATTTGACTTGGTGATGGAGAGCAGGTCGCAGGAAGAGCAACAATTTTAAGCATTTTCTACAGAGAGAAATACTGGACTAAAGAGTATCAATCAAGCAGCTCGGCACAGGGAAAAATATCCTGGTTGAGACTGTGTCGTTGTTACAGTTGACCGTCTCATTCCAGCTTCATTTCCAGGATGGACGGCTTCCATTTCCGAATTTTCACCTCCCTCATTGACAATGAGATTGCTTCAGCACCGACAAGGGTAGGGAAACAGGTTGCCAAAATCATGCCAGTTTGGTTGTTATTGGCTTCCATACAGGTTGTTATTGGCTTCCATACAGGTATGGTAGCTGATAGTTAGTAACTTGTGACTTTGTAGTAATGGCACAAAGACAGGGCGGAAGCAAGTCGTGCATGGCTGTCATCAATTTAAAATGTGTACATCAAAGTATACCACCGCCAGCCCCTCTTGTTGAAATGTTACTGCTTCACTGGAGTTCACTCTCAGTTTTCAGCTGCCACAGAAAATAATTTAGTTCCACCGCATGCATCTGAACATGAGATACAGTGTTCAATCACTTAAATCAGTGCTGTGCACAGCATGCAAGTGTTGCTTCAAGCCTTCAAGGATAGCAGCCCTTTCTGGCCGATGAATTGACATTTGCTAGGTTAAGGCATTAGATAATAATTCATTTGAGAATTGAGATGTCCACGTGAGTCTTTGTTTACGGTACTTCACCTCCTACAAAGTGTTGCTTGTACCAGAAGTATATATATATATACTCCACTTAGACAAACACAACACTGCACTGTAAAAGTCACCCTTCGGAGATTAAATAAAATGAAGATCTTTTCTTGATTGCCTCCTTCAGTTTCATGATTGTACGGCAATTACTCTTTCAGATGTCATAAAGTAGACCTAACATTATTGGAACTTGAATCTTAGCAGTGTTCAGAGCATCCAGTTGCCAAGGTGATGAGCAATGGAGCGCGCCTTATAGGGTTGTAACTGTGAAGCCATTTTTTACAACAGAGTGGTACCCTTTTCTTCACTGCATTCAACTTATTGATCAGGAAGTCATAGGGCCCTATCACCCACAATACCCAAGGCAGATCAATTAGCTGATTAACTGCATTGCTCCAAGATCAATTGTCCTCCATGAAAAATTGCACCCTTTAGTCATCATCTGCCACTGATCTGCATATGTAACTTTTCATCATTCGATGTTATAATCACAATGCCTCAACATATGAAGTTATTTCACCATGCCTACTAAGCTGAGGTTCTGTCAGAAACTATCCTTTTGGATGCAGTATGCTCCCCTTGCTGCATGAAACGCTTTAATCGGTCTGTTTCACCAATGACAGGTAACCATTCCATGAGAACATCCACGGTCACATAATCAGGAAAGCACCTCTCTTCCCTCATTTGGTCCATAAGTTCGAAAGCCTTTTCTGGCATGTTCTTATCACGAAGCCCCTTCAATAGAGCATTAAAGGTCGTTACATTTGCTGGCACACTCTTCTCCTTCATCTCATCGAACAGCTCAATGGCTAAATCAACATCTCCTCTCTTGCAGAGGAAGTCAATGAGAGTATTATATATCACATTGTTGGGATGAATACCAGATTCATCCATAGATCTTAAAATTCTCAATGCCTCATCAATTTTGCCAACTTTGCAATACCCATGTACAAGTGTACCAACCTCCTTCATTTCCTGAAGAAGTTCATAAGCCTCATGCAACCTCTTCTTCCTGCAAAATCCAGCAATCAAAATGTTGTATGCCTTTGTGTCCAGCTTAAAGCCTGCCTCCTTCATCGATGAAGCCATAGAGCAAGCATCCTCCAGTCGGCCTGCTTGTGTCAATCCTGATATCATAGTGAAATACATGATCGCATCTGGTGAATGCCCTTCACTCATCTTCTCATGGAACAATTCCATGGCCATACCAACATTGTTGGTGTGGAGGAGAGCCCCAACCAAAGTGCTGTAGGTCACTGCATTGCCCTTGCCTTCTGGCCACACAGTTCTTTTCTCCCTGAAGAACTCCAGTGCAGCTCCGGTTCTCCCAGCCCGGCACAAGCCACCAACAATCGTGTTGAGGGTGACAATGTTTTGTGGCACACCCTCATTCTCCATCTTCTCTACCAACTCATAGGCCATTGAAATATTCCCCACGCGGCAGAATGCATCAATCAAGCAGTTGTAAGTGACAGTATTAGGAGGACACCCATGCACGCTACTCATCCGCTGCTCCACGAACGCGAGAGCCTCCTGGACCCGGCCGCTCTTGCACAGACCATCTACAACGGTGTTCAACGTCACGACATCTGGCCGGATATCTAAATCCTGGCGAGACATTCCATCGAGCACCCTGAGCGCGTCCCCAACACGGCCGGCCTTGCAGAGGCCGTTGACGAGAATGCCGTAGGTGACGACGTCGGGCCGGACGGAGGCACAACCCTGCAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0336800.1 | 6 | 7765769 | T | C |
| Osa06LNT0336800.1 | 6 | 7766506 | C | T |
| Osa06LNT0336800.1 | 6 | 7766571 | C | T |
| Osa06LNT0336800.1 | 6 | 7766874 | A | G |
| Osa06LNT0336800.1 | 6 | 7768154 | T | C |
| Osa06LNT0336800.1 | 6 | 7769024 | A | G |
| Osa06LNT0336800.1 | 6 | 7769080 | T | C |
| Osa06LNT0336800.1 | 6 | 7769225 | A | T |
| Osa06LNT0336800.1 | 6 | 7767231 | C | T |
| Osa06LNT0336800.1 | 6 | 7766724 | G | A |
| Osa06LNT0336800.1 | 6 | 7766755 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0336800.1 | osa-miR5529 | Cleavage | 4.5 | 16.784 | 1 | 21 |
| Osa06LNT0336800.1 | osa-miR5533 | Translation | 5.0 | 13.769 | 1 | 21 |
| Osa06LNT0336800.1 | osa-miR169a | Translation | 4.0 | 18.949 | 1 | 21 |
| Osa06LNT0336800.1 | osa-miR169b | Translation | 4.0 | 18.949 | 1 | 21 |
| Osa06LNT0336800.1 | osa-miR169c | Translation | 4.0 | 18.949 | 1 | 21 |
| Osa06LNT0336800.1 | osa-miR169e | Translation | 4.5 | 18.949 | 1 | 21 |
| Osa06LNT0336800.1 | osa-miR169f.1 | Translation | 4.5 | 18.949 | 1 | 21 |
| Osa06LNT0336800.1 | osa-miR169g | Translation | 4.5 | 18.949 | 1 | 21 |
| Osa06LNT0336800.1 | osa-miR169h | Translation | 4.5 | 18.949 | 1 | 21 |
| Osa06LNT0336800.1 | osa-miR169i-5p.1 | Translation | 4.5 | 18.949 | 1 | 21 |
| Osa06LNT0336800.1 | osa-miR169j | Translation | 4.5 | 18.949 | 1 | 21 |
| Osa06LNT0336800.1 | osa-miR169k | Translation | 4.5 | 18.949 | 1 | 21 |
| Osa06LNT0336800.1 | osa-miR169l | Translation | 4.5 | 18.949 | 1 | 21 |
| Osa06LNT0336800.1 | osa-miR169m | Translation | 4.5 | 18.949 | 1 | 21 |
| Osa06LNT0336800.1 | osa-miR169n | Translation | 4.5 | 18.949 | 1 | 21 |
| Osa06LNT0336800.1 | osa-miR169o | Translation | 4.5 | 18.949 | 1 | 21 |
| Osa06LNT0336800.1 | osa-miR169r-5p | Translation | 5.0 | 18.949 | 1 | 21 |
| Osa06LNT0336800.1 | osa-miR1882e-3p | Cleavage | 5.0 | 11.261 | 1 | 24 |
| Osa06LNT0336800.1 | osa-miR6251 | Translation | 5.0 | 23.817 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0336800.1 | 6 | nan | Physiological trait | Eating quality | RM253 | RM162 |
| Osa06LNT0336800.1 | 6 | nan | Morphological trait | Culm/leaf | RM121 | RM136 |
| Osa06LNT0336800.1 | 6 | nan | Morphological trait | Panicle/flower | RM121 | RM136 |
| Osa06LNT0336800.1 | 6 | qHD-6-1 | Physiological trait | Flowering | RG424 | RZ667 |
| Osa06LNT0336800.1 | 6 | qPH2-6-1 | Morphological trait | Dwarf | RG424 | RZ667 |
| Osa06LNT0336800.1 | 6 | qTN2-6-1 | Morphological trait | Culm/leaf | RG424 | RZ667 |
| Osa06LNT0336800.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0336800.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0336800.1 | 6 | qPSP-6 | Physiological trait | Flowering | R2171 | RZ144 |
| Osa06LNT0336800.1 | 6 | qPHw6-2 | Resistance or Tolerance | Other soil stress tolerance | RG424 | RZ667 |
| Osa06LNT0336800.1 | 6 | tns6 | Morphological trait | Seed | RG138 | RG64 |
| Osa06LNT0336800.1 | 6 | qSFWd6 | Resistance or Tolerance | Other soil stress tolerance | RG424 | RZ667 |
| Osa06LNT0336800.1 | 6 | tns6 | Morphological trait | Panicle/flower | RG138 | RG64 |
| Osa06LNT0336800.1 | 6 | sd6 | Morphological trait | Panicle/flower | RG138 | RG64 |
| Osa06LNT0336800.1 | 6 | sd6 | Morphological trait | Seed | RG138 | RG64 |
| Osa06LNT0336800.1 | 6 | nan | Resistance or Tolerance | Blast resistance | C1478 | R2171 |
| Osa06LNT0336800.1 | 6 | S5 | Physiological trait | Sterility | RG213 | C235 |
| Osa06LNT0336800.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Osa06LNT0336800.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0336800.1 | 6 | qRS6-1 | Morphological trait | Shoot/Seedling | RZ667 | RG424 |
| Osa06LNT0336800.1 | 6 | gp6 | Morphological trait | Panicle/flower | RZ667 | RG424 |
| Osa06LNT0336800.1 | 6 | qLVBTL6-1 | Morphological trait | Panicle/flower | RZ667 | RG424 |
| Osa06LNT0336800.1 | 6 | qLVBSL6-1 | Morphological trait | Panicle/flower | RZ667 | RG424 |
| Osa06LNT0336800.1 | 6 | qGY6-1 | Morphological trait | Seed | RZ667 | RG424 |
| Osa06LNT0336800.1 | 6 | qSL6-1 | Morphological trait | Culm/leaf | RZ667 | RG424 |
| Osa06LNT0336800.1 | 6 | nan | Resistance or Tolerance | Lodging resistance | C1478 | R2171 |
| Osa06LNT0336800.1 | 6 | qTL6-1 | Morphological trait | Culm/leaf | RZ667 | RG424 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)