© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0337200.1
CGCTGGCCAAGCAGTTACAATCCAGTTATAATAATATAATGGAGTAGTGACTAGCCTAGAACAAGAATTTGCAGTTGAAACCTAATATTAAAGCTTGAATAATAACTGACATAACACCAGCTATTATAACTCAGCGGTAAATGTAAACAGATACTTATATAACAAACTGCAAATTTCACGCCTCCACCGAGATCCAGGTGACATCTTAGTCGACATTCATTGCCCCGGAATGATAGCTATCCAGCTCCTTGTCCAATTGCTCAGCTGATTTCTCCACAGGTCCCTTCCGAACATAGCCACGCCCACGCCCACGCCCAAAGTTATTACGTCCACGGCCACGACCTCGGCCTTGCCCACCTCTTTGTGCAAAATTGTTACGCTTCCACCCAGGAATGAAATTAGATGAACCAGCTGCACCTCGACCAAACCCACTCCCACCAGGCATCATTACAACTTCTCGCTGTCCTCTACCCCTTGCACCAGGGACAACACTAACACGGGGTGCTGAAGGAGCAGCCATACCCAAATCTGCTCCTATCACTTCGATCTTCATTGGCTTCCCATCAAGGCGCACATTATTATATCGTTTTAAAGCCGCAACTGCTTCACTCCTCCTAGTGAATATCACCTCAGCTGAACCAGTTGGGCGTCTATTGTTATCATAATGAACAGCACAATGCTTCAAATGACCCATCTCGGAAAAAAGTTCCTGTATATCTTCTTTTGTCACTCCATAGTGCAAGTTTGAAATATACAGCTTTGTACTAGATTCTGTCACAGAAAGGCCAGCAGCAACCATGCTGTCCTCAAACAGATCTTGCCTCCATACAATATCCTTGGTTTTGTTGAATGACTGATGATTTTCCATAGCACACATACCCAGATGATGATGAGAAATAGTTAGCGTCAAACCACAAAACCCATCAATCCATGGTACTTGATGAATCAACTAGCATCAGCAAAACTATAATAACCCTATACCATTGCACAAAATTCCGTACGAATTGAAGATCTTATCCACATAAACAAGTATCCAATCAGTAAATACATAGACCATCAGCATGCCAATGAAGGAGAGACGATGCTTCTAGTTTCAAGCATAAACCGGCCAAACCAACACAATTGTGCCATGAAATTCTCAGCAGAAAAGTGCCAGTTCTCAGGGTGATTTCAATAAGAGAAACCTGTCAGATCCTCTCTGAAGTTCCACGGTTACAAAGTGGCAGATATGGTCTGACATGAACCCATGGTCCGTTTCATTTCATTAATTTTCTAACCACCTCTTGTGTAGGTCCCTAATAATTCAGATTCTTGAAGGTATACAGAAAAATAGCAATAAATTTGTCCTTGCCTTGGCAATAGCATACGATGATGACCGAGTACTAACACCAAGTGGCCTTCGTGAAGGCACTCCTACTCCCCTTCCACGGAAGGTGCCAGCACCACGTCCACGCCCTGAACCATAGCTGAACCTTTGGCCATCACCTCTGCCTCGACCTCCTCCCTGTGACCTACCCCTTCCTCTCCCCCTAGAATTTCTGTTGTTCTTAATCATATCGTCCAGTGACATATCCAAAGATGTCGCCATTCTAAAGAAAACCTGCAGGATCCCCTCCCCTGCTCTCCGCTGCTCTGCTCGCCACCTCCCCTGTTCAGCCGCGAGATGGCGCAAGGAGCGGAGGAGCCGAGAGACGGGAGGTTTTCTTTCTCTCCCGTCAAGCCGCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0337200.1 | 6 | 8130615 | A | G |
| Osa06LNT0337200.1 | 6 | 8132155 | A | G |
| Osa06LNT0337200.1 | 6 | 8133655 | T | A |
| Osa06LNT0337200.1 | 6 | 8133824 | G | A |
| Osa06LNT0337200.1 | 6 | 8134001 | G | A |
| Osa06LNT0337200.1 | 6 | 8134071 | G | C |
| Osa06LNT0337200.1 | 6 | 8134368 | A | G |
| Osa06LNT0337200.1 | 6 | 8131276 | A | T |
| Osa06LNT0337200.1 | 6 | 8131280 | A | G |
| Osa06LNT0337200.1 | 6 | 8129879 | T | C |
| Osa06LNT0337200.1 | 6 | 8130377 | A | T |
| Osa06LNT0337200.1 | 6 | 8130584 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0337200.1 | osa-miR5816 | Cleavage | 5.0 | 16.31 | 1 | 24 |
| Osa06LNT0337200.1 | osa-miR6254 | Translation | 5.0 | 10.076 | 1 | 21 |
| Osa06LNT0337200.1 | osa-miR6256 | Cleavage | 5.0 | 16.825 | 1 | 22 |
| Osa06LNT0337200.1 | osa-miR396a-3p | Cleavage | 5.0 | 14.18 | 1 | 20 |
| Osa06LNT0337200.1 | osa-miR396b-3p | Cleavage | 5.0 | 14.18 | 1 | 20 |
| Osa06LNT0337200.1 | osa-miR169p | Cleavage | 5.0 | 13.341 | 1 | 22 |
| Osa06LNT0337200.1 | osa-miR816 | Translation | 4.0 | 20.381 | 1 | 20 |
| Osa06LNT0337200.1 | osa-miR1854-5p | Cleavage | 4.0 | 9.023 | 1 | 21 |
| Osa06LNT0337200.1 | osa-miR2096-3p | Cleavage | 3.5 | 10.251 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0337200.1 | 6 | nan | Physiological trait | Eating quality | RM253 | RM162 |
| Osa06LNT0337200.1 | 6 | nan | Morphological trait | Culm/leaf | RM121 | RM136 |
| Osa06LNT0337200.1 | 6 | nan | Morphological trait | Panicle/flower | RM121 | RM136 |
| Osa06LNT0337200.1 | 6 | qHD-6-1 | Physiological trait | Flowering | RG424 | RZ667 |
| Osa06LNT0337200.1 | 6 | qPH2-6-1 | Morphological trait | Dwarf | RG424 | RZ667 |
| Osa06LNT0337200.1 | 6 | qTN2-6-1 | Morphological trait | Culm/leaf | RG424 | RZ667 |
| Osa06LNT0337200.1 | 6 | nan | Physiological trait | Flowering | R2171 | R2123 |
| Osa06LNT0337200.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0337200.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0337200.1 | 6 | qPHw6-2 | Resistance or Tolerance | Other soil stress tolerance | RG424 | RZ667 |
| Osa06LNT0337200.1 | 6 | nan | Physiological trait | Eating quality | RG64 | R2171 |
| Osa06LNT0337200.1 | 6 | tns6 | Morphological trait | Panicle/flower | RG138 | RG64 |
| Osa06LNT0337200.1 | 6 | qSFWd6 | Resistance or Tolerance | Other soil stress tolerance | RG424 | RZ667 |
| Osa06LNT0337200.1 | 6 | sd6 | Morphological trait | Panicle/flower | RG138 | RG64 |
| Osa06LNT0337200.1 | 6 | tns6 | Morphological trait | Seed | RG138 | RG64 |
| Osa06LNT0337200.1 | 6 | sd6 | Morphological trait | Seed | RG138 | RG64 |
| Osa06LNT0337200.1 | 6 | qRS6-1 | Morphological trait | Shoot/Seedling | RZ667 | RG424 |
| Osa06LNT0337200.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0337200.1 | 6 | S5 | Physiological trait | Sterility | RG213 | C235 |
| Osa06LNT0337200.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Osa06LNT0337200.1 | 6 | nan | Resistance or Tolerance | Blast resistance | R2171 | RG64 |
| Osa06LNT0337200.1 | 6 | nan | Resistance or Tolerance | Blast resistance | R2171 | RG64 |
| Osa06LNT0337200.1 | 6 | gp6 | Morphological trait | Panicle/flower | RZ667 | RG424 |
| Osa06LNT0337200.1 | 6 | qLVBTL6-1 | Morphological trait | Panicle/flower | RZ667 | RG424 |
| Osa06LNT0337200.1 | 6 | qLVBSL6-1 | Morphological trait | Panicle/flower | RZ667 | RG424 |
| Osa06LNT0337200.1 | 6 | qGY6-1 | Morphological trait | Seed | RZ667 | RG424 |
| Osa06LNT0337200.1 | 6 | qTL6-1 | Morphological trait | Culm/leaf | RZ667 | RG424 |
| Osa06LNT0337200.1 | 6 | qSL6-1 | Morphological trait | Culm/leaf | RZ667 | RG424 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)