© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0030900.1
GCAAAGAAACAAGCAGCAAAACAACCCTCGCTACTTTTCTTCCTTAACAACTCTTCCTACCAACCAAACGAAACAACGAACCCCCAATTAATCATCATCCCGTCATGACAAGCGAAAGCCAGTATCAGAGAAACTAATCAACGCCATTCAAAATTCAATTCATTCATGATTGACCACCCTGCAAGAAACCTTAGCTCGATTGGTCTAGCTAGCTAGAGTTAATTAACAACATGCCAATTAAACATATGTGCATATATATGAAGTACTCGTACTCTTCCATTAATGGAGCTATATAGGAGAAGATCAATGTAAAGTTTGCATAAAATTATCATGGCTCGTATGGTCAGTCCTGCAACCTGCAGGGTGCAATGCTGGAGCCTGGGAATTAATTAGGCGCTTACATGTACAAGAAGTGCTTAGTACTAGAGCTAGGTAGAGCTAGCTAGTAAGAGCATAGAAATGATACGAGACCCAGTAGAAAACCCTGTACCATCTCGCAGCACGAAAGAAAAAAACAAAATCAAGAAACGAAACAGAAGGTGATCATTTGGGGGGAAAAAGATGTAACGAGATGTTAATTAATTAAACAGCATGATCGATCGAGAGCCAAATGACCTCTTGTCTAGCTAGTCTGATGATTAATTCAGCTTCAGATTGATGGTGGTCGTCGCGTCAAGGCTGGTTGGTGCCGTGGATGAAGGACGGCAGCAGCATGTCCTGCAGGAGGCCCAAGTCTTGCGCCATGAAGTGCTGCATCTGGAGCGCCGCCGGTGACGACGGCTGAGCCGAGGCGGCGACGGTGACCGCGCTCGTCGTCTCGCTCGAGACGCCGCCTCCGCCGCTGATTGCACTGTTAAGGCCATGGCTCGTCGTCGTCGTCGCCGCGGCGCCGCCCATCGTAGTCATGCCGTGGTGGGCGGCGGCGGCGCGCGGCAGGAAGCTGCTCAGCACGTCGATGCCGGACGACCGGCCGAACTGCGCGGCGGCGCCGGAGCCCAGCGGCAACGGCGGCGCCATGCCGTGGTGTCCGTGGTGGCCGTGGTGGTGGTGCAGCTGGTGCGCGGCCGCCGCCGCCGCGGCCGCCTGCGCGTGCGCGGCGAGCAGGTGCGTGCTGCCGCGGAGCGTGGCCGGGATGGGGTGCGTGTGCTTGCCCTCGTACGTGGTGATCACCACCGCCGGGTCCTGGTACGACCGCTCCACCCGCTTCTTCACCGGGCACTTCTGCGTCGTGCACCTGTAGTAGCTCCTGGGGTATGGGCTGTTCTTGACGGCCTTCTGGCCGTACTTGCGCCACCGGTAGCCGTCCTCGAGGTGGTCGACCTCGCTCTTGGTCATGAACGCGAACCGCGGCTGCCTCGCCCGCTTCTCCCCCTTCCCCGCCTTCCCTCCCTTCGCCGCCGACCTGCACCCATCCAATCCATACCATATTACCAATCAGCTCGCGATCGATCGGTACGTTTCTCCGCGTCAAAAGCGGCGGAATTTCGTATGTCGTCCGGCAAGCGACGGCCACGGCCGGGATCGATCCCGTTCAAACTGGATAGACACACGCGACTACGCGAGCGTGTGTGTACACAAGGTTAGGGGGTTCACACCCTGTCTGGCACAGTGGCACTGGCCTAGCTTTCTCGTGATGGCGTCCCCTTTTCGGCTCACACTGGATTCTACTGTTGGTAGCTGGAGATTGCACTGAAAAGGAAGCTGCTGGCAAGATCCAAGTAGCAGAATGGGGTGGTGGATAACACTGGCATGCTTATTGTCTAGGGATCAATCTACTTTGCTTTTCTTTTATTCCTATCTACCCTTTTTGGGCATAATCTTTGGTAAAAGGGGATCAAAGACAAAAGTTACAAAGATCTTTGGTCATGTTGGAACTTGGAAGAAGGTGTGAAGAATGAAGGAACTAGCAGTAGCAGGCAGGTAATCAAGAAAAGCAAAACAAAGATCAGAGGGGCTAGCTGATACATTAAACGACTTATTTTAATAAAACATTATGGCAAGGTTTTAAATTTTTTGGAAGAAAGTGTGTGAGGCATGCAAGCTGAGTGTGAAACCCTAGATATGTTCACACGTTTGCCAAACTACCTTAAAAAGGAATAAAAGAACAAAAAGAGGAGGAATAGAAGAATGAATGAATGAATGAATGAATGGAAGAAAGAAAGAATGACCACCAAGCAAAGCAAGGAAGCAAAATCTAGCCCACAGAAAACCGGCCCCAAATCTTGATACCGGATCAGCAAAAAAAAGAAGCTCTAAATGATCTCATCCTAATGAATTATTAGCAACTAAGATCAAGAACTTGGCAAAATGACCCAAGATTTCAAGGGAAAAAAGGAGAAAAAAAGGAGAGAATTTAATGGTGAAGTGACCTAACTCACCCTTTCTTGTTCTTGTGTCCTTCATCTTCTTCTCCCTTGCCTTCCTCTTTGTTCTCATCCTCCTCCTTCTTGCACCTTGCCGGCGACTCCTCCTCCCCGGCGCCGGCGCCGGCGCCGCCTCCACCTCCTCCACCAACCCCCTCGCTCGACGACGTCGACATCGACGACGTCGTGTTCGGCGTCAGCGGCGGCGCCCCGCCGCCGCCGGCCGCGACGACGTCCACCACCCCGACCTCCCTCTTGACGTCCTCCCCGACCGGCAGCTCCAGCGCGCGGCACATCAGGTCGTAGTCCATCTGCATCGGCGTCCCCGCCTGCAGGTAGTCGGCGAACCACGACGACGGCAGCATCTGCATCTCCCCCGCGCCGCCCCCCGGCCGCGCGAACAGCGGCGCCAGCTCGTCCTGGAACTGGTACTCGCCCGACATAGCCGGATCCACCGCCGCCTCTCGCCGACGCTGGCCGTGCTCGTGGTTCTTGGCTCTAGCACGCACGCACGCACGCACCCTCTCTCTCTCGCGCTTCCAGGATCGAGATGGAGAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0030900.1 | 1 | 27196918 | G | A |
| Osa01LNT0030900.1 | 1 | 27197114 | A | G |
| Osa01LNT0030900.1 | 1 | 27197221 | A | C |
| Osa01LNT0030900.1 | 1 | 27197492 | T | G |
| Osa01LNT0030900.1 | 1 | 27198631 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0030900.1 | osa-miR5526 | Cleavage | 5.0 | 20.567 | 1 | 21 |
| Osa01LNT0030900.1 | osa-miR167c-3p | Cleavage | 5.0 | 23.173 | 1 | 23 |
| Osa01LNT0030900.1 | osa-miR159a.2 | Translation | 5.0 | 17.414 | 1 | 21 |
| Osa01LNT0030900.1 | osa-miR2864.1 | Translation | 3.5 | 9.979 | 1 | 21 |
| Osa01LNT0030900.1 | osa-miR5499 | Translation | 4.5 | 7.395 | 1 | 21 |
| Osa01LNT0030900.1 | osa-miR415 | Cleavage | 5.0 | 16.636 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0030900.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0030900.1 | 1 | yld1.1 | Physiological trait | Source activity | RM5 | RG462 |
| Osa01LNT0030900.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0030900.1 | 1 | QPh1b | Resistance or Tolerance | Submergency tolerance | RZ527 | RZ154 |
| Osa01LNT0030900.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0030900.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0030900.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0030900.1 | 1 | nan | Morphological trait | Seed | CDO118 | CDO455 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)