© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0341800.1
GGAGGGAGTAAGCCGCCCAAAGCTAACATAATGTATTACAAAATAGCGACAAGAACCACCTTGGTGTACCAAATGAATTACTGTACCACCCAAATTGACAAGAAAATTACAAATCAATAACAGGAACAGGGCCAACAAACGGATACACATAGTTTACTCATAATATCATGGATCAATCTCGCTAGAAGCGCTTCAACTGTCAAGTCCAAGCTCAATCTGTTAGAATAGACAAGAGCACACTATTTTTTGGGGTATCACGGTGAAATCATTTTTTCGAAATACATGTTACCCCCTCCCTTCTTAACTCCTTGTACGGCTGTATCTGACTTAGCAAACAAAATTGTTCAAGGTCAACCACACTATCAAAATCGCTCTACTTTCTTGCTGAGAGATTCTGCTTTGTGTTCACTGCTAGCAGTTACAATATAACCAGCACCAACCTGACAATCTTTCAAAACAGCACGTTCTTGAAGTTGCACATTATTGCATATCACAGAACCTTGTATGTGACAACCATCTTCAATAACCACATGGTTCATCACGACAGAATTGACAATCTTTACATTTGAACCAATTCGACAATGACGGCCAATAACAGATCGCTTCACACTACATTTGTCACCTAATTGTGAACCCTCAGCAAGCATGCATTGTGGTCCGATTGTAGTCTTCGATCCAAGCACAGAAGTTGGATGGATGATGTTGTTCTGTGCAGAGAAGGAATAACCGGACAAGTGACTAGCATCCCCTACAACATCTCGGTTGATATCACAGTATGCCTGAATGGAGTTCAAACGATGACAGTACTTGCTTTTAGTAGCAATATAGACACAGCACCTATATGTTCCTCCAGATGATAACAAATCTTTCTTAAAAGCAGATGGTGCAAGTATGCGATGCTGTGATAGACACTGCAAATGACTATTGGATGGAACTGTAGTATCGCCAGTTTCATCAACGGTTGTTCCCTCACCTCCTGATGAAGATGATTTCAACTGACTCCTCACTAAGTATGGTAGGACTTCAAGTCTAATGCTACGGTATGATTCTTTCTCTTCCAGTATATTCTGTAATGTTGTCCTCTTAAAAGCATACAGATGTGCATCCATCAGATCACTTCGAATTTCCATCTCGCCTACAGCTCGGATTTTTCGCTTGTAAACACGTACATCTTTTTCAACATCGGTTCCTGATACAATATGCAACAAGAATTGCCTTGTTATGTCTAGCCCAACTATATTCAGTCGAGTTGGTTTTTTAGCTTTATCTTTCCCTCCAGAAGAAGCAGCATCTGAAGGACCACTGATAGGAACAGAACATAGTAAAGCAGTAACAGCGGCACCATTTCTTCTATGAGTAGCAGCAACAGCCCCAGGAAGTACATCAGTTACTAGGTCGCCGCTAATCACCAAAACATCATTTGCAGTCAGTCGCTTTGAAATAGCTCGTAGTGCACCAGCTGTTCCAATGTCCTCTGGAACTGCCACAACCTCCACGAGAAGGCGGTCTAGGTAGGCGCTCGAGGCCCAAGCTCCGACGAGTCGCGCGGCCTCCTGCCCCTCCACCACCACGATGATGTCCTTGAGGTCGCTGGCCTCGAGGAGGTCGAGCACGTAGGAGAGCACGGGGCGGTTGGCGACGGGGAGGAGCGCCTTGGGGACATCCTGCGGGAGAAGAGGAAGAGGGTCACAGTTAGGGCGCCGGAGTTAAAAGACGGCGGTGGGGAGGAGAGGACCTTGGAGACGAGGGGCGAGAGCTTCTCGGAGGTGCCCCCGGCGAGGACGACGACCTGGAAGTCCATCTCCGACGGCGGGGAAGCGTCGGCGACGGCGGCGCTTGGTCGCGTCGGGAGTCTGGACTAGGGAAGGAGGAGAGATCGTTT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0341800.1 | 6 | 13517296 | A | G |
| Osa06LNT0341800.1 | 6 | 13517840 | C | T |
| Osa06LNT0341800.1 | 6 | 13517885 | G | A |
| Osa06LNT0341800.1 | 6 | 13518981 | C | T |
| Osa06LNT0341800.1 | 6 | 13519851 | T | C |
| Osa06LNT0341800.1 | 6 | 13520528 | C | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0341800.1 | osa-miR5544 | Cleavage | 4.0 | 17.619 | 1 | 22 |
| Osa06LNT0341800.1 | osa-miR5794 | Translation | 5.0 | 15.259 | 1 | 21 |
| Osa06LNT0341800.1 | osa-miR812r | Translation | 5.0 | 17.791 | 1 | 24 |
| Osa06LNT0341800.1 | osa-miR6245 | Cleavage | 5.0 | 17.563 | 1 | 21 |
| Osa06LNT0341800.1 | osa-miR398b | Cleavage | 5.0 | 24.057 | 1 | 21 |
| Osa06LNT0341800.1 | osa-miR167h-3p | Cleavage | 5.0 | 22.494 | 1 | 21 |
| Osa06LNT0341800.1 | osa-miR1441 | Translation | 5.0 | 10.983 | 1 | 21 |
| Osa06LNT0341800.1 | osa-miR2101-5p | Cleavage | 3.0 | 8.457 | 1 | 22 |
| Osa06LNT0341800.1 | osa-miR5080 | Cleavage | 3.0 | 15.044 | 1 | 21 |
| Osa06LNT0341800.1 | osa-miR5080 | Translation | 5.0 | 16.525 | 1 | 21 |
| Osa06LNT0341800.1 | osa-miR5508 | Translation | 5.0 | 10.514 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0341800.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0341800.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0341800.1 | 6 | tgw6.1 | Physiological trait | Source activity | RG264 | RM3 |
| Osa06LNT0341800.1 | 6 | qSPN-6 | Morphological trait | Panicle/flower | C235 | G294 |
| Osa06LNT0341800.1 | 6 | qPHw6-2 | Resistance or Tolerance | Other soil stress tolerance | RG424 | RZ667 |
| Osa06LNT0341800.1 | 6 | qSFWd6 | Resistance or Tolerance | Other soil stress tolerance | RG424 | RZ667 |
| Osa06LNT0341800.1 | 6 | qSPN-6 | Morphological trait | Panicle/flower | C235 | G294 |
| Osa06LNT0341800.1 | 6 | gw-6 | Morphological trait | Seed | C235 | G294 |
| Osa06LNT0341800.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Osa06LNT0341800.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0341800.1 | 6 | gp6 | Morphological trait | Panicle/flower | RZ667 | RG424 |
| Osa06LNT0341800.1 | 6 | qGY6-1 | Morphological trait | Seed | RZ667 | RG424 |
| Osa06LNT0341800.1 | 6 | qRS6-1 | Morphological trait | Shoot/Seedling | RZ667 | RG424 |
| Osa06LNT0341800.1 | 6 | qLVBSL6-1 | Morphological trait | Panicle/flower | RZ667 | RG424 |
| Osa06LNT0341800.1 | 6 | qSL6-1 | Morphological trait | Culm/leaf | RZ667 | RG424 |
| Osa06LNT0341800.1 | 6 | qLVBTL6-1 | Morphological trait | Panicle/flower | RZ667 | RG424 |
| Osa06LNT0341800.1 | 6 | qHD-6-1 | Physiological trait | Flowering | RG424 | RZ667 |
| Osa06LNT0341800.1 | 6 | qPH2-6-1 | Morphological trait | Dwarf | RG424 | RZ667 |
| Osa06LNT0341800.1 | 6 | qTL6-1 | Morphological trait | Culm/leaf | RZ667 | RG424 |
| Osa06LNT0341800.1 | 6 | nan | Physiological trait | Eating quality | RM253 | RM162 |
| Osa06LNT0341800.1 | 6 | qTN2-6-1 | Morphological trait | Culm/leaf | RG424 | RZ667 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)