© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0345200.1
TTGGAGAATATGCAAATTAATTAAGGAGAAAAAAGTTTGTTACATAAATAGGGCGGTTACAAATCCTACTAACTGCAGCAACACTACATCCTGTAGATTAATAGAGAGAAGATCCTAGTATGTCTAATAGTCTATGATTGCACATGTATGTACAGAACCCACTGACTCAATTAAATGTTGTGAACATGGGGCACTATGCAGTACATTGCAGAAAAGAAAAAATGGTTGCACCCAAGGATTACAGGACAGCAAACTAATTAAGAAAAAAATTGTGTAAAGCACTTAATAAGAATATCTGCCTCAACAGTCACCATATGTGTGTCCTGAAATAGTTTACCAGAATTTCCTTGATTGGGGATTTCTCTTCACTGATTTTTCCCTCAAAACTTCTTGTAGCTATCACTAATGAATGCTTTGTGGAATCTTTTCCTCAACGTTTGTGGTGTCTAGAACGCCTTCTGGATCTGTCTTTATCAGATGATCTTCGACTACTGGATTTATGTCTTTCCTCATATTCATGATCACTAGAATCAGTATCAGGATTGCGAGTCCGGTGATGCCTTTTCTCACGGTGTTTCCTCTTAGTATATTGGCTGTCACTGGAATCAGCATAAGGACTTCTACTCCTGCGTGTTCTATGCTTTGAATGTGACTTTCTTTTCTTACTCCTATGATGCTCAATAGAAGAATCAGAACCTGGAGTTCCACTTCGAATTTTATGGCGTGATCTTCTCTCCCTACTCCTATGCTGATCAGAGGTCGAATCTGAATCTAGACTACCACTTTGGGTTTGACGGTGCGAAGAGCGTGACCTGCTTTTCTCAGCTCTATGCTCCTGCTTCTCATATTTCAAACCAAGCTCTTCAACATTATCTGATGGAACATCTGCACTGGCATTGGCAATTTCCTCCTTGTCAAGAGCACTCTCGTTCTCCTTTATTTCCTGACAAGTAATTGCCTTTCTGTTTCTAGATATGCCAATTGCATTAGCTGTTGAAGGTGTTTCTGATCTAAATAAGACATTGGGTGGTGTGGGCTTTTCTGGTGGAACATCCAACCCCAGTTCTTTACCCAATGATTCTAGGAAATCCTCAGCAACAAGACGATTGAGAACCATATTGGCATCTTCACTGGTCTTTACTGGATCCACTGGTTGATTAGCAAGAGGTTCAGCCATATCATCATCTGAATCATCAGAAAAGATAGCCTTGTAAAGATCAACAGGTCTCTGCACACTGCTGGACTCAATTTCAGGGTCAGTCGCAGCTCCCTTTGCTTCTGTCTCTGTTGCTCCTGCCACAGAAGTATGCTGTGGAGCAATACTCGAACTTTCCACTTCGTTTGTCCTCGTGGTGGATTCTGACATGAAGATAAGGCTGTCCATCTTACTTCTTGGCCTTTGAACATGAAATGGCTTTCCCATGAAAGGATCAACTATGTCAAAACGCTTGCACAGTATTGGTGATGGTCGCCATTCAAATTCCTCCCTTCGTGGATAAATTGATTTCTCATCTCGTGCAGGTATAGATCTCTCTGATTCAGTAGATGATACAAAACGTTGCTCATTTATTCCAGATAAACCCAACAATGATAAAGGATCCATAGCCTTTTTTTCCTTGCCCTTTTCAATTGTCTCAGCAGCAGCCTCAAAATCTAGTCTTTCCCGGGCACGGTCAACATCTGACATAGTACTTGTAGGTATAAGATTTGCAGGGCGAAGGCCTCCTTGGTATTTATCCTTAAGAAATTGCTCAAACCTTGCTTGCTTTGCAGGATCATTTCTGAAAGGCTTTTCATACTCTGGTAGGCCGTCAAGAGATATTGGCTTCACAAAGTTGTCAGCCAGATTGGACTGCAGTTGAATTGCTTCCTTTGCAGGGAAGGATGAGCTAGATGATTTAGTGCTTCTATCAAGGGGCCTTTCACCAAGAATCTTTCCACGATTTTCAGCAGTCAACTTGTCAGAAGACTTGGATTGCACAGTATCAGGCTTTTGCTGGTCAATATATTTCTGCTGATACTCCCATAACTTCCTTGCATAGTAGCTACAGCCATCTCCTTCATTGAGGAAATTAAACTGTGTATTTGTTTTGCTTTTCTCTTTGTAAAAATCCTCAATATGTTTCCCACAACGAGCAACCATAGCGGCACAACCCTCAATCAATAATCTCAAGCTAGTATCTTCTGGAGCAGGAACCTCAGGAGGAGCCAGATCAGAAAGGTTATTAACATCCTGTCGTGGAGTTAGAAACTTGTGGCGACCATCAAAATCAGATGGGATCTCAGGAGGATCAAATCTTTCAAGCTTGTACTCAGAACTTGAGGCGATTTTAAAAGCCAGGAAGACACCTCTTTTCCTGTCTTCAAGTTTATAATTACTATCGCTGGCTGTTTTTGAAGGCTCAATATCAACTTCCATTTGTTCATAAGCAAAACCTGATGCATAAATATCCTCATCTTCAACACCTAGCTCCTCAAGTGCTCCAATCCCAAAGCCAGGAGCATATTGTCAGTTTGAAATCAGAAGACTCCCCCTCATTGAAACATCACTTCTATTACGGTCCCTCGCTGACTTCTGCAATCTTTTCCTATCTTTAAACTCAGGAGCATGCTTGAATGGGTCAAAACCTAACCCATGCAAGTCCTGCTTGGGATGAAGAACGTATACAGGGGTATTTCCAGAGGCATGTAACTCCTCAAATGATTCTGTGGCACCATCATCCTTATCAGACTTGTGTGAATCAACTTGTATTTTTTGACCACCAGTTTTTGTACCAGAGAGTGCAAGGAAGGCTTTTCTTGCTTCCCTGCGCGATTCGTATAAGGAGTCAGCATGTGCATCTCTAATTGAACGACCTTGGCGCCAGCCCATTTTCATCAATAACTTCACTCCAATAGAAGTAGTAGCAGGGACCACCAGCTCATCAGGAATAGGCCCAGGTATAGCCGATGGTCTCTCTTTCTGCTCCTTGGAAGCTTGCTTTCGGGCATGTTCTGTAGCTGTAAAACCAAATGTATCATACTGCTGAGATGTTTCCAAGGCATTACCTCCCATATCCTTTATGTCTTCCTCATCGAGAAAACTGTATATGCTTTGCTTTTTCATCTCAGCCCTATTTTTCCGTGACGATGTAAAAGTCTGTGGAGTCCATCCCTCTTTTGTGCCAACGGTATTGTAATAACCAGCTGAGAAACCTCCCGTAAATGCACCATGAAACCTTCTTCGCCCTTCCTCATCTCTCACCTCCTGCTTCCAGGCGGGGAGGGCGCGGAGCTGGCCGGCCTCGGCGACGGCCCGGCGCTTGCGTGCGGAGGTGTCCTCCTCCCGCTCGATCGGCGTCCCGTAGACGACGAGATCCTCGTCGTCGTCGTCGAACCCCATGGTGGCGGCCGGGTGGTGGGAACGCCGGCCCGGCGACGGGAAGACCTAGCTCGCCGCGCCGGGTGCGGGCGGCGCGGAGGGGCCGGTGAGGTGGGGGGTGGAGGGTGTTTCTGGAAAGTGGGACGGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0345200.1 | 6 | 16826374 | A | G |
| Osa06LNT0345200.1 | 6 | 16827038 | T | C |
| Osa06LNT0345200.1 | 6 | 16827252 | G | A |
| Osa06LNT0345200.1 | 6 | 16827559 | T | C |
| Osa06LNT0345200.1 | 6 | 16827609 | A | T |
| Osa06LNT0345200.1 | 6 | 16827633 | G | A |
| Osa06LNT0345200.1 | 6 | 16828636 | C | T |
| Osa06LNT0345200.1 | 6 | 16829142 | C | T |
| Osa06LNT0345200.1 | 6 | 16829420 | T | C |
| Osa06LNT0345200.1 | 6 | 16829618 | A | G |
| Osa06LNT0345200.1 | 6 | 16830288 | T | C |
| Osa06LNT0345200.1 | 6 | 16830482 | G | A |
| Osa06LNT0345200.1 | 6 | 16830749 | A | G |
| Osa06LNT0345200.1 | 6 | 16830805 | T | A |
| Osa06LNT0345200.1 | 6 | 16831021 | T | C |
| Osa06LNT0345200.1 | 6 | 16831842 | G | A |
| Osa06LNT0345200.1 | 6 | 16832560 | T | A |
| Osa06LNT0345200.1 | 6 | 16833915 | G | T |
| Osa06LNT0345200.1 | 6 | 16835296 | T | C |
| Osa06LNT0345200.1 | 6 | 16835711 | A | C |
| Osa06LNT0345200.1 | 6 | 16835866 | A | C |
| Osa06LNT0345200.1 | 6 | 16832912 | A | G |
| Osa06LNT0345200.1 | 6 | 16831682 | T | C |
| Osa06LNT0345200.1 | 6 | 16832879 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0345200.1 | osa-miR5829 | Cleavage | 5.0 | 15.773 | 1 | 24 |
| Osa06LNT0345200.1 | osa-miR164a | Cleavage | 4.0 | 18.818 | 1 | 21 |
| Osa06LNT0345200.1 | osa-miR164a | Cleavage | 4.5 | 24.843 | 1 | 21 |
| Osa06LNT0345200.1 | osa-miR164b | Cleavage | 4.0 | 18.818 | 1 | 21 |
| Osa06LNT0345200.1 | osa-miR164b | Cleavage | 4.5 | 24.843 | 1 | 21 |
| Osa06LNT0345200.1 | osa-miR159a.2 | Translation | 4.5 | 19.994 | 1 | 21 |
| Osa06LNT0345200.1 | osa-miR164c | Cleavage | 4.5 | 18.818 | 1 | 21 |
| Osa06LNT0345200.1 | osa-miR164c | Cleavage | 5.0 | 24.843 | 1 | 21 |
| Osa06LNT0345200.1 | osa-miR164d | Cleavage | 4.5 | 24.843 | 1 | 21 |
| Osa06LNT0345200.1 | osa-miR164d | Cleavage | 4.0 | 18.818 | 1 | 21 |
| Osa06LNT0345200.1 | osa-miR164e | Cleavage | 4.0 | 18.818 | 1 | 21 |
| Osa06LNT0345200.1 | osa-miR164e | Cleavage | 4.5 | 24.843 | 1 | 21 |
| Osa06LNT0345200.1 | osa-miR164f | Cleavage | 4.0 | 18.818 | 1 | 21 |
| Osa06LNT0345200.1 | osa-miR164f | Cleavage | 4.5 | 24.843 | 1 | 21 |
| Osa06LNT0345200.1 | osa-miR415 | Cleavage | 4.5 | 22.065 | 1 | 21 |
| Osa06LNT0345200.1 | osa-miR528-5p | Cleavage | 4.5 | 9.69 | 1 | 21 |
| Osa06LNT0345200.1 | osa-miR528-5p | Cleavage | 5.0 | 20.565 | 1 | 21 |
| Osa06LNT0345200.1 | osa-miR530-3p | Cleavage | 5.0 | 23.389 | 1 | 21 |
| Osa06LNT0345200.1 | osa-miR1428e-3p | Cleavage | 4.5 | 14.225 | 1 | 21 |
| Osa06LNT0345200.1 | osa-miR1882e-3p | Cleavage | 4.5 | 15.768 | 1 | 24 |
| Osa06LNT0345200.1 | osa-miR2093-3p | Translation | 5.0 | 12.125 | 1 | 20 |
| Osa06LNT0345200.1 | osa-miR2097-5p | Translation | 5.0 | 22.765 | 1 | 22 |
| Osa06LNT0345200.1 | osa-miR5161 | Cleavage | 5.0 | 17.664 | 1 | 20 |
| Osa06LNT0345200.1 | osa-miR5340 | Cleavage | 4.0 | 17.947 | 1 | 23 |
| Osa06LNT0345200.1 | osa-miR5523 | Translation | 5.0 | 10.509 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0345200.1 | 6 | qGY6-1 | Morphological trait | Seed | RZ667 | RG424 |
| Osa06LNT0345200.1 | 6 | qLVBSL6-1 | Morphological trait | Panicle/flower | RZ667 | RG424 |
| Osa06LNT0345200.1 | 6 | qLVBTL6-1 | Morphological trait | Panicle/flower | RZ667 | RG424 |
| Osa06LNT0345200.1 | 6 | qSL6-1 | Morphological trait | Culm/leaf | RZ667 | RG424 |
| Osa06LNT0345200.1 | 6 | qTL6-1 | Morphological trait | Culm/leaf | RZ667 | RG424 |
| Osa06LNT0345200.1 | 6 | nan | Physiological trait | Eating quality | RM253 | RM162 |
| Osa06LNT0345200.1 | 6 | qHD-6-1 | Physiological trait | Flowering | RG424 | RZ667 |
| Osa06LNT0345200.1 | 6 | qPH2-6-1 | Morphological trait | Dwarf | RG424 | RZ667 |
| Osa06LNT0345200.1 | 6 | qTN2-6-1 | Morphological trait | Culm/leaf | RG424 | RZ667 |
| Osa06LNT0345200.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0345200.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0345200.1 | 6 | tgw6.1 | Physiological trait | Source activity | RG264 | RM3 |
| Osa06LNT0345200.1 | 6 | qSFWd6 | Resistance or Tolerance | Other soil stress tolerance | RG424 | RZ667 |
| Osa06LNT0345200.1 | 6 | qPHw6-2 | Resistance or Tolerance | Other soil stress tolerance | RG424 | RZ667 |
| Osa06LNT0345200.1 | 6 | qSPN-6 | Morphological trait | Panicle/flower | C235 | G294 |
| Osa06LNT0345200.1 | 6 | qSPN-6 | Morphological trait | Panicle/flower | C235 | G294 |
| Osa06LNT0345200.1 | 6 | gw-6 | Morphological trait | Seed | C235 | G294 |
| Osa06LNT0345200.1 | 6 | gp6 | Morphological trait | Panicle/flower | RZ667 | RG424 |
| Osa06LNT0345200.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Osa06LNT0345200.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0345200.1 | 6 | qRS6-1 | Morphological trait | Shoot/Seedling | RZ667 | RG424 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)