© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0345600.1
TAGAGGAGACAATGTAAATACATTTCATTGGAGATTAGTGTAAACAAATTTACAACGGAGTAAAATGCTAAATGATGGCTCCGGATTCATGCCCTCCAAATTTTCAGAGGTGAGAAATGTATTCACACAGCCAGCTAAAAGTACTGCTAACAAACATCAACCTGATAAAGAAACAAAGATCACGCAAATTCATCACTGTAGGAAAAACATGGCAACCCTGTTTTTCTCGATACACCAGATCTTTTTTCTTTCACGCCGTTAATGTCTGCATGCCCTCAACCAGGTCAAAGAAATGTCAAAATCTTACATTAGGTTTATATGCCCTCGGTGCATCAAGCCTCATGAATTTTTCTTCCACATGTCAAACGCCAAACTAAACGAATCTTTGTCCGTTTCTGCTCACTTACCGTGCTTCAAATCGAACATAACGCACATATCTGCGGCTGTTTTCATCTGGATGATATTGATCACTTGTTTTAATGCCCAACCAACTAGAGTTGAAATAAAAACGAAGAAAGTGAGAGGACTTCCCTTTAGAAAGCATCTGCACACATTAAGCAAGCTTGTCGATTTCTCATCAGCAAACAGAAAAAGAATTATGTACAGAACCTCGGAAGCAACACAACAGAATGCCATGAATGGTCGATGTCCATAATATAATTTTAGAAGCCAATTGCCAGTGTCCTTCACATCCTTGTGGCTAGTTTTACCTGATAGGAACATACTATACATTTGAAACCAATGGCTTGTAATATCCAACCCAAGCAGCATCAAAAAAACTAAGCCAGGTCTGTAAAGTTGGGAGAGAAGTGCCAATAAACAGGCAGTGCTAACCCTATCTGTTACCATGTCCAGCACAGCTCCAAATGTTGATGCTTGGTTAAACTTTCATGCAAACCAACCATCCAATCCATCGCAGAAAAAGCTGAAGAAGTATAAGATAGCAAAGAGCACCCTGTTGGAATAACATACAGCAAAAGCAATGAAGTTTATGATGATCCTAAAATATCCAATGATATTAGGGATGTAAAGATAGACTGACGGCGTCTTCTCAGAAGAAGGTTGTGCCATTGGAGATCAGTAGTTATTACTCACTAAGAGCCAGAAAGCTTCTCACTCACAGGATCCCCTCGCCTTCCCTGCTCTGCTCGCCAGATGGAGATCGGCGCCCCGCCCCTGTTCAGCCGCGCAAGGGGGCGGAGGGCGGGAGGAGACGACGAGAGACTGTAGATTTTCTTTTACGCGAAGGGAAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0345600.1 | 6 | 16999851 | G | A |
| Osa06LNT0345600.1 | 6 | 17000419 | A | C |
| Osa06LNT0345600.1 | 6 | 17000493 | A | G |
| Osa06LNT0345600.1 | 6 | 17000723 | A | G |
| Osa06LNT0345600.1 | 6 | 17000732 | T | C |
| Osa06LNT0345600.1 | 6 | 17000941 | A | G |
| Osa06LNT0345600.1 | 6 | 17001256 | C | T |
| Osa06LNT0345600.1 | 6 | 17001564 | A | G |
| Osa06LNT0345600.1 | 6 | 17001942 | T | C |
| Osa06LNT0345600.1 | 6 | 17002068 | A | C |
| Osa06LNT0345600.1 | 6 | 17002502 | A | G |
| Osa06LNT0345600.1 | 6 | 17002673 | G | A |
| Osa06LNT0345600.1 | 6 | 17002920 | A | G |
| Osa06LNT0345600.1 | 6 | 17002921 | A | G |
| Osa06LNT0345600.1 | 6 | 17003001 | A | C |
| Osa06LNT0345600.1 | 6 | 17003537 | A | G |
| Osa06LNT0345600.1 | 6 | 17007768 | G | C |
| Osa06LNT0345600.1 | 6 | 17008468 | C | T |
| Osa06LNT0345600.1 | 6 | 16999162 | C | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0345600.1 | osa-miR168b | Cleavage | 3.5 | 15.087 | 1 | 21 |
| Osa06LNT0345600.1 | osa-miR818a | Cleavage | 3.5 | 13.886 | 1 | 22 |
| Osa06LNT0345600.1 | osa-miR818b | Cleavage | 3.5 | 13.886 | 1 | 22 |
| Osa06LNT0345600.1 | osa-miR818c | Cleavage | 3.5 | 13.886 | 1 | 22 |
| Osa06LNT0345600.1 | osa-miR818d | Cleavage | 3.5 | 13.886 | 1 | 22 |
| Osa06LNT0345600.1 | osa-miR818e | Cleavage | 3.5 | 13.886 | 1 | 22 |
| Osa06LNT0345600.1 | osa-miR2096-3p | Cleavage | 4.5 | 10.813 | 1 | 21 |
| Osa06LNT0345600.1 | osa-miR5155 | Translation | 4.5 | 14.182 | 1 | 24 |
| Osa06LNT0345600.1 | osa-miR5492 | Translation | 4.0 | 18.223 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0345600.1 | 6 | qSPN-6 | Morphological trait | Panicle/flower | C235 | G294 |
| Osa06LNT0345600.1 | 6 | qPHw6-2 | Resistance or Tolerance | Other soil stress tolerance | RG424 | RZ667 |
| Osa06LNT0345600.1 | 6 | qSFWd6 | Resistance or Tolerance | Other soil stress tolerance | RG424 | RZ667 |
| Osa06LNT0345600.1 | 6 | qSPN-6 | Morphological trait | Panicle/flower | C235 | G294 |
| Osa06LNT0345600.1 | 6 | gw-6 | Morphological trait | Seed | C235 | G294 |
| Osa06LNT0345600.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Osa06LNT0345600.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0345600.1 | 6 | gp6 | Morphological trait | Panicle/flower | RZ667 | RG424 |
| Osa06LNT0345600.1 | 6 | qRS6-1 | Morphological trait | Shoot/Seedling | RZ667 | RG424 |
| Osa06LNT0345600.1 | 6 | qGY6-1 | Morphological trait | Seed | RZ667 | RG424 |
| Osa06LNT0345600.1 | 6 | qLVBSL6-1 | Morphological trait | Panicle/flower | RZ667 | RG424 |
| Osa06LNT0345600.1 | 6 | qLVBTL6-1 | Morphological trait | Panicle/flower | RZ667 | RG424 |
| Osa06LNT0345600.1 | 6 | qSL6-1 | Morphological trait | Culm/leaf | RZ667 | RG424 |
| Osa06LNT0345600.1 | 6 | qTL6-1 | Morphological trait | Culm/leaf | RZ667 | RG424 |
| Osa06LNT0345600.1 | 6 | nan | Physiological trait | Eating quality | RM253 | RM162 |
| Osa06LNT0345600.1 | 6 | qHD-6-1 | Physiological trait | Flowering | RG424 | RZ667 |
| Osa06LNT0345600.1 | 6 | qPH2-6-1 | Morphological trait | Dwarf | RG424 | RZ667 |
| Osa06LNT0345600.1 | 6 | qTN2-6-1 | Morphological trait | Culm/leaf | RG424 | RZ667 |
| Osa06LNT0345600.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0345600.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0345600.1 | 6 | tgw6.1 | Physiological trait | Source activity | RG264 | RM3 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)