© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0345800.1
GTTAAACCGGTCTCTACATCCAAAACGGATCGTACACAGCCAAAATTCAGATAATTTGGGGAACCTGACAGGGCATGAAGTATTTCAGACCACAGAAGGCATCGACGAAGGGCTCGCCGTCCATTGTAAAATGGACGGCAGTCCACATGACTCGAGAGCTAAATCTCCATGGTTGGCGCCGTTCTTGTGATGGAAATGGAAGAACGGTCCTTTGGCCAAGGAGTAACCATCGCGTTTCCACTTTTCAAGAAAGCTCTCATCAGTGTTGACCTGGGCCACTTCTTAGTAAATGCCTCGACATGGCACTGTACCTAACAAACGATACGCAGCTTCTGACTTTATGAAGTACACCGTACAACTGTAGACTTCATGTTCTGCTTATTCAGAAAGCTGGTAATTTCCATGATGATACAGAAAGCTGGTAATTTCCATGATGATTCCATCGAACGGTTTAACCTTGCTCCTCCGAATGCTGTATGCACGAGCTGCGACCCCTTTTTTCTTCTATATTACTAATAACCACAATGCGAAATATGGCGCAATGTCAGGATGGATGCTTCACAACTCACAAGAAGCACACAGATGAGTAGACGACGCCGCTGAAGGCAAACCGTGGCAGTTCATTATGTGCAGTGCCACCATGATCATTTAGTATGCCATAGGCAGAGGTCCATTCATGTCGATTAAGGTACCGCCAATATTGTCACACATGTTAAGTATGGCCTGCAAAGACAGAGCAGCGTGTTGGAAATATGAAGCAATCATGTTTTGCACAGAAGGAAAACTGCCTCTCACAAGAACATGAGGAGACAAATTTCTAAGATCGCTCAGGCCATCTTTTTGAGCCATTCTACAATCAGTGTCGACCACATCAAATCACGAGCACATGATTAAAGGAAAGAATCATATACACACAATAAAGCAGTTCATGTTATTTTCACCCTGCACAAACAACTCAATAAATACCTATAAATAATTGGTACATTTTCAAGTTTTCAGAAAGAATATCTACTATGTGAAAACAAGAAACTACAATCTCATTAACGGTCAATAGTTTGGCATAGCACAAAAGATGATTTCTCAATGAAGGCTAGTGATGCAGAAGGATCAGGCTCTAATTAAGTAGTATGTTAGAACTAGTACTGGATCACAGCAATGTCTTGGTAATTCTAGCATATATGCAAAACTGCCAGAGCAGCCTATTTATAGTAAAATAAATGTTCTGCTAAAGCAATGAAAGATAGCGATTAGCGAGAATAGAGATCTGCACGCACCAAATGGTGCTTTAAACTAATCTAGGCAAGCACGCAATACAGCAGTAGATAAATTTGATCTACTTCAGATATCAAAATTCAGCAGATACTACCGACTTTGTTGTTTTATCTGATGCTGTTCTCATATATATCAAGCAGAAATTAATAATCTATGGATGCAAAAAGTTTCACAAACAGAAATTATCCTCTTATTTAAAGATGAGAATTCTCTGTAAAAAGTTGATGAATTACCACAAAAGGGCATGTCAGGGTAGCACAAATTTCAATATATTGGGAATATTATAAGAACCACAAAACAAATTTCAAGCATGTTGTTAACAACGAAACAAATAACAGAGGCAAGCAAGTTCGAAATCACTGCAATCCAAAATCATTTGATATTTAGGAAGTACTGAAGCATACAAAATAAATCTTTGTACCACACTGTGTTTCCGTGCGAAATCTATATTGCAGCTAGGATCTGTAATAATGAACAATTTATCTCCAATAACACTATTCCTCAGGTAAGTACTTACATCTTACAATAACTAGTTACATCCATATAGATATTCAGAATAATTCTTGCACATGAGCAGTTCTTCCACTAACATTTTGAAATATTAAGTAAAAATATGAGGATCTGATCATGAAGACCCATGTCTCTGGTATCCAAAAACAAATGTATGAAGACCCATGTCAATGAAAAAGAGACACTGTATAGTTATCTCTGAAACCAAGAATGCTGGAGAAGCCATAGCTATACTCCTAAAATGCTGTCATAATGAATTGGCCATACAAAGCACAAGGTGTAGTTCTTTTATAGTACTATGAACTAAGAAATTCAGTTATATATTTCAGGTTCTGACACATTGTCACGTTCCAAGGCAAAAAGAGCAACTAGAAGGTTCAGGAATGCTCCTCGCATCACTGGCTCACTGAGTCACTGTCTGCAACCAGTCCAATGTAAAATCCTGTAAACCATGAGTAAGAAATTTACCATTGATAGGAATTACATAAGTAACTAAGGGATAAAACCTTTCAGAATTTCAAATAGGTAAAACAGCAAGCTCTAAAAACACTTCACTTGTATGATTTTCGACCATCAGCAAGATGGAATCCAGGGCAATGCAACTGAAGCACCCACATGTCTTTCTTTGGAATGTAGTAATTGTAGGATGAAATCCAGAATATGATAAAACCCATACTGCCAAAGTGCAACTCAACAAATGGAGTGTCAAGAACCTCCAGTATGTGAGCTCCATGCTCCTTTGGTATCAAGAATGAAAAATCATAAAGGAAGAAATCATCAAGGCCCCCAAATCTCATCCCAACATTTGTCAATCACTCTCCAAACCCTCTTCCTCCGACAAACATCTCTGACCACCATCTCCCAAATGGGAGCCTCTGGCACAATGTACTTAGCCAGCATTACCATTAAAACCTCTCCAGCTGCCATATTCCTTCTTCTGTCGCATAGCCTCACAACCAGGCCTTCCAAGAACTCCCTCCCCTTCCTCTCTCCAGCTCCAAACTCCCTCAAGAAAATATTGCATGTCACCGTGTCTGGATCACACCCCTGGTCAAGCATCCTGTTCAGCAAGTCCATTGCCCGTGGGAGGTCCTTGGCCAGGAGCAGCCCATCCAGCAGGACATTATAACTGATGACATCTGGATCAGCATGACCACTTGCCAGCATGTCATAAAATAATCGAAGACCACCATCCACCATTCCGGAAACACATAAGCCCTTGATCATTGAAGTATAAGCAATTGTGTCAGGTGCACAGCCACGGTCAAGCATGTGCTTCCAGACCATCATAGCATCCTTCAATCTCCCTACATTGCAGAGTCCATTGATCAATATGCTGTAACTAACAGCATTTGGCACGCACCCAGCCCCTATCATCTCCTCCCAGACAGAAAGAGCCCGAGACGTATCTCCAATTTTGAAATATCCTTGAATAATCGACCCATAAGTAATGATATTTGGCGCACATTTTGAATGAATCATCTCTCGAAATAACAATTCAGCCTCCGTCATCTTCCCAAAATTGGCAAGGCCACCAATCATTGCTGAATATAAAACAACATTTGGCCTTACCGGACTTGCCACCATCGCCTCCCACACCTTCAACGCACAGTCAATTTCCCCAGACTTGCAAAATCCTGTTATGACAGTTGAGTACACAAATTCATTCCATGCAAGACCGTTCCTCTCCATCTCCTCCGCGACCTTCCACGCATCCTTCACTCTCCCGCATCTCACCAGTCCATCCACCACTGCCCCGTACGTCATCACCCCTGGCACCACCCCCTCCCTCTCCATCCTTCTCATCACCCCCATTGCCGCCCCGGCCCTCCCGCACACCAGCAGACCATGCACCAGCACATTGTATGTCGCGGTGGTCGGCACGCACCCCTTCAGCTGCATAAACCCAAACAGCTTGGCTGCTCCCTTGACATCCCCGGCGCGCAGCATCGCCCTCAGAACGGGGTTAAACGCCTCGGCCGCAACCACCCCATCCGCCACCATCTCGTGCACCAGCGCCACCGCGTCATCCACCCGGCCCGCATCGGCGAGCGCGGACACCACCGTCGAGTAGGTGAACTTATCCGGCGCGAGATCCCACCCCGGGATGATCTCGTGGAGGATCCGCAGCGCGACGTCGAGGTAGCGGCCGGGATCCCTCGGGACGAGAGAGGAGCAGACGCACTTGAGGAGGAGGTTGAAGGAGAGCAGCGTGGGCGCGAGGCGGCCGGGGAAGCGTCGGAGGGAGCGGGAGAAGAAGGGCGGGAGGAGGTGCGGCGGGAGCGGGAAGCGGAGGAGCGCGGAGTTGAAGGAGTGGTGGGTGACGGCGGCCGGGTGGAGCGGGGCGAGGAAGAGGCGGAGCGCGAGGAGGGGGCCCCCGCCCCCGCCCCCGCCCCCCCGGGAGCGGGAGAGGGCGGCGACGAGGTGGGGGAAGAGGTGCGGCGAGGCGTCGTGGGGAAGGCGGCGGAGGAAGGCGAGCACGGTGGACGCGGAGGGGACCGGGTCGTCGGCGGCGGCGAGCCCCCGCGCGACGGTGAGGAGGGTGGGCGCGCCGGCGCGCGGGAAGAGATCTGCGGAGAGGGGGGAGTCGTCGTCGTCGTCATCGGAGGAGGAGGAGACAAAGGGTTCGGAGCGGGAGAGGCGGGCGGCGGCGGGGAGGGGTGGGTCGGGGAGGAGGCGGCGGCGGAGGGGGAGAGGAGGGGGCATAGGAGAAGCATGGCGGAGAGAGGAAGGCGGCGGGGCGGGGTTTAGGGGACGAGGAGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0345800.1 | 6 | 17573081 | T | C |
| Osa06LNT0345800.1 | 6 | 17573295 | T | C |
| Osa06LNT0345800.1 | 6 | 17573911 | T | C |
| Osa06LNT0345800.1 | 6 | 17573946 | T | C |
| Osa06LNT0345800.1 | 6 | 17574467 | A | G |
| Osa06LNT0345800.1 | 6 | 17575895 | G | A |
| Osa06LNT0345800.1 | 6 | 17576801 | T | C |
| Osa06LNT0345800.1 | 6 | 17577578 | T | C |
| Osa06LNT0345800.1 | 6 | 17578094 | C | T |
| Osa06LNT0345800.1 | 6 | 17578713 | T | G |
| Osa06LNT0345800.1 | 6 | 17576002 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0345800.1 | osa-miR5827 | Cleavage | 5.0 | 11.166 | 1 | 21 |
| Osa06LNT0345800.1 | osa-miR156c-3p | Cleavage | 4.5 | 8.563 | 1 | 22 |
| Osa06LNT0345800.1 | osa-miR156f-3p | Cleavage | 5.0 | 8.563 | 1 | 22 |
| Osa06LNT0345800.1 | osa-miR156g-3p | Cleavage | 4.5 | 8.563 | 1 | 22 |
| Osa06LNT0345800.1 | osa-miR156h-3p | Cleavage | 5.0 | 8.563 | 1 | 22 |
| Osa06LNT0345800.1 | osa-miR156j-3p | Cleavage | 4.5 | 8.563 | 1 | 22 |
| Osa06LNT0345800.1 | osa-miR156l-3p | Cleavage | 5.0 | 8.563 | 1 | 22 |
| Osa06LNT0345800.1 | osa-miR408-3p | Cleavage | 5.0 | 19.834 | 1 | 21 |
| Osa06LNT0345800.1 | osa-miR416 | Cleavage | 5.0 | 12.081 | 1 | 21 |
| Osa06LNT0345800.1 | osa-miR426 | Cleavage | 4.5 | 19.811 | 1 | 21 |
| Osa06LNT0345800.1 | osa-miR1850.1 | Translation | 4.5 | 9.396 | 1 | 21 |
| Osa06LNT0345800.1 | osa-miR1846a-3p | Cleavage | 4.5 | 16.989 | 1 | 21 |
| Osa06LNT0345800.1 | osa-miR1846b-3p | Cleavage | 4.5 | 16.989 | 1 | 21 |
| Osa06LNT0345800.1 | osa-miR2093-3p | Cleavage | 4.0 | 10.489 | 1 | 20 |
| Osa06LNT0345800.1 | osa-miR2868 | Cleavage | 4.5 | 12.639 | 1 | 20 |
| Osa06LNT0345800.1 | osa-miR2868 | Cleavage | 4.0 | 23.663 | 1 | 20 |
| Osa06LNT0345800.1 | osa-miR2878-5p | Translation | 4.0 | 9.836 | 1 | 24 |
| Osa06LNT0345800.1 | osa-miR2931 | Cleavage | 3.5 | 21.83 | 1 | 20 |
| Osa06LNT0345800.1 | osa-miR5143a | Cleavage | 5.0 | 14.306 | 1 | 24 |
| Osa06LNT0345800.1 | osa-miR5145 | Cleavage | 4.0 | 10.089 | 1 | 24 |
| Osa06LNT0345800.1 | osa-miR5143b | Cleavage | 5.0 | 14.306 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0345800.1 | 6 | gp6 | Morphological trait | Panicle/flower | RZ667 | RG424 |
| Osa06LNT0345800.1 | 6 | qRS6-1 | Morphological trait | Shoot/Seedling | RZ667 | RG424 |
| Osa06LNT0345800.1 | 6 | qGY6-1 | Morphological trait | Seed | RZ667 | RG424 |
| Osa06LNT0345800.1 | 6 | qLVBSL6-1 | Morphological trait | Panicle/flower | RZ667 | RG424 |
| Osa06LNT0345800.1 | 6 | qLVBTL6-1 | Morphological trait | Panicle/flower | RZ667 | RG424 |
| Osa06LNT0345800.1 | 6 | qSL6-1 | Morphological trait | Culm/leaf | RZ667 | RG424 |
| Osa06LNT0345800.1 | 6 | qTL6-1 | Morphological trait | Culm/leaf | RZ667 | RG424 |
| Osa06LNT0345800.1 | 6 | nan | Physiological trait | Eating quality | RM253 | RM162 |
| Osa06LNT0345800.1 | 6 | qHD-6-1 | Physiological trait | Flowering | RG424 | RZ667 |
| Osa06LNT0345800.1 | 6 | qPH2-6-1 | Morphological trait | Dwarf | RG424 | RZ667 |
| Osa06LNT0345800.1 | 6 | qTN2-6-1 | Morphological trait | Culm/leaf | RG424 | RZ667 |
| Osa06LNT0345800.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0345800.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0345800.1 | 6 | tgw6.1 | Physiological trait | Source activity | RG264 | RM3 |
| Osa06LNT0345800.1 | 6 | qSPN-6 | Morphological trait | Panicle/flower | C235 | G294 |
| Osa06LNT0345800.1 | 6 | gw-6 | Morphological trait | Seed | C235 | G294 |
| Osa06LNT0345800.1 | 6 | qPHw6-2 | Resistance or Tolerance | Other soil stress tolerance | RG424 | RZ667 |
| Osa06LNT0345800.1 | 6 | qSFWd6 | Resistance or Tolerance | Other soil stress tolerance | RG424 | RZ667 |
| Osa06LNT0345800.1 | 6 | qSPN-6 | Morphological trait | Panicle/flower | C235 | G294 |
| Osa06LNT0345800.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0345800.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)