© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0031800.1
GGAGATACCATTTTAGGATTCTTTTGGTGGCCAAATGGATGAGGCCAGCAACGAAAGAGATAAGAAAAGGAAATTTGGAAATTTGGGTGCTTTCAAAATTGGTAGGCAGTTCAAATGAATGTACTACTACTACTAGCAGCAGCAGCAGGCCTCGAGGCAATGAGATGATGAATCAGAGTGGCAGATTGAGCCGTGATTTATTGAAATCTTCGTCTTCTTGAGTTCTTTTGGTTGCCCATGTTTTGGCTCTGTGACAATGCTGAGAGTTGCTGTAGTCCGTAGGCGTGCAATAAATGGAATGTACGGGGTAGGTGTGTGTACTTGACCTCTTGCCAATCATCTTTTTGAACAAATGAGAGTGTAACAGATGTCATGGAGAATTCCTGACAAATTCATGTGTTGCGAAAAAAGCTGTTTTATGGACATATCTTAATTCTATATGCACTACAGTAGTAATAGCATGAGGGGGAGAGGCAGGAGTATTCCAGGAGGACCAGGACAAAGGGAAAACAACAATTCATCTTCCAAATAAATCCAAATAAAGGGTAAAACATCATAGTAAAAACTTTATAGTGATAACAGTTCAGCTGTTCATGATAGTGATGATATGGTGCTAGTTTTTTTAATTTGTTCTCCATGTCAAACAATAAACATACTTCAAAGTAATTGTCTCAGATTCCATGTGCAGTGGTTGTGATTGTCTTTAACATGCCACTTTTAAACAAGTAGGCACTGGTGCAGGTGCGTTTTTCACACAGTACACGGAGCAATGTGATAAAGGTCATATATGTACTCCCCTCATTCCAGTTAAGTACTTCAAAAGAGTCTCCAGTTCATGAAAAAGAAAAGTTTCCATAGGATTCCCCAAGCTTACTGAATTGTGACTTTTAAAACAGCTGTATTGACAGCCTGTGTTATTCGCATTCAGAATTGGTCCCGAGTCCTGACCATATATACTGTTAAATTTAAGATCAACCATAAAATTCGGTGGTCACTGTGCTAAAAGTTTAGAGGTGTACATGATTTTTGATGATTTACGTGTAATGTTGGATGAAGTTGACTACATACCTATGTACAAACTTTCTATTGTGCAGCTATAATAAAATTTGGATCAAGATTCAGATGGTATACTCGCTCCTCAATGACTGAGTGTGCATCTTATCTTGGTAACATCCCCAGATCAGATTCTTATAAAACCTTGGCCTCAGTATCTCCGTGACCTATCTTCCTCAGGGCAACTACCTTTAATTCTATTCACCAGAACTATGTTCAAGATTCACGATTCCCAACTGCAGGTATAGATTCTTGAATTGCCTGAGCAAATGTTGCAATCTTGTAGGTGAAAAACCCAACAAGCATGGGTATCAATTCCAGGTGCATGAAGCCATAATCTGGAACTAAAATCTCATTCCATCGGTTATACATCATCACAAGTGCCACTGGAATAAGCAGTCTTGGTTGGGCAGCAGCACTCTTCACAGTTTCTCCAGTTCCACCAGCTAAGGAATCCACACTGGTCCCAAGCATGCGGAGATACAGGACAGATCCAATCAGCCCTGCACCAAAGCTTGCAGCAATCTCAGGAGAGTAGGAAAAATAGGCGGAGACCAAACCAATGCCACCAATGCCTAAAGTAAACAACTGCAATCTTTGTTTCAACTCTAGATATTGCTCCCTTGATTTAGCTGCCAATACCTCAGGGTCTCCTTGCTGCCCTCTTGACTTTGATTCCCTTAGTATGACATCACTGCCACCAGTTGCTGCCTTAGCTGCTCGGTCCCACTTTGCTTGTTCCCGGCGAGTCGGAACTAGCCTCCATCTAGGAGACGCAACACCGTTGACAGCCTCAGCTCCAATGGCCCGCCCCCTCCAGGCAGCCTCAACCTGGGTTTTCAAGATTGGCCTGGTTGGCGCCTGAAGCTCCTTGCTCAGATCAACATCCACACTGTCGAGGCTCATTGCGCGGTTGATGCTTAGGAACCCTGATTCCGAGTCCTCATCCACCGGGGTGAGGCGGGTGATGGTGGGGGGCGTGTCTGCGCCGCCGTTGGCGATGACGCGCTCCATGTGTGGGAGGAAGTCCTTGTTCCAGATGAAGTCGTCGGTGTTGCCCACGGGGTCGCGGTCCTCCTTCCCCATCCAGTACTTGCGCGGCTTGGGCGTCGCCGGCCCGCCGCCGTACTCCCCGGGCGCCATCCCCGTCGACCACTTCTGCGGCTTCTTCTTCGGCAGTATCACCTTCACCGGCCTCCGCCCCGCCGGCTGATCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0031800.1 | 1 | 27678134 | C | T |
| Osa01LNT0031800.1 | 1 | 27678238 | T | A |
| Osa01LNT0031800.1 | 1 | 27678574 | A | G |
| Osa01LNT0031800.1 | 1 | 27679464 | T | C |
| Osa01LNT0031800.1 | 1 | 27680430 | C | T |
| Osa01LNT0031800.1 | 1 | 27680683 | G | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0031800.1 | osa-miR5516b | Cleavage | 5.0 | 23.969 | 1 | 21 |
| Osa01LNT0031800.1 | osa-miR530-5p | Cleavage | 4.5 | 17.807 | 1 | 20 |
| Osa01LNT0031800.1 | osa-miR1853-5p | Translation | 5.0 | 13.76 | 1 | 24 |
| Osa01LNT0031800.1 | osa-miR1873 | Translation | 5.0 | 14.901 | 1 | 24 |
| Osa01LNT0031800.1 | osa-miR2275a | Translation | 4.5 | 17.562 | 1 | 22 |
| Osa01LNT0031800.1 | osa-miR2275b | Translation | 4.5 | 17.562 | 1 | 22 |
| Osa01LNT0031800.1 | osa-miR2873a | Translation | 5.0 | 14.265 | 1 | 24 |
| Osa01LNT0031800.1 | osa-miR5489 | Cleavage | 4.5 | 16.789 | 1 | 21 |
| Osa01LNT0031800.1 | osa-miR5491 | Cleavage | 5.0 | 9.939 | 1 | 21 |
| Osa01LNT0031800.1 | osa-miR5516a | Cleavage | 5.0 | 23.969 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0031800.1 | 1 | yld1.1 | Physiological trait | Source activity | RM5 | RG462 |
| Osa01LNT0031800.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0031800.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0031800.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0031800.1 | 1 | QPh1b | Resistance or Tolerance | Submergency tolerance | RZ527 | RZ154 |
| Osa01LNT0031800.1 | 1 | nan | Morphological trait | Seed | CDO118 | CDO455 |
| Osa01LNT0031800.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0031800.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)