© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0346200.1
GGCAGGATCAAAATTTTCATCATAAAGAAACAGCAGCAATTCCGATAAAAATCAGTCAAACAAGTCACTCGAGTATATCCCCACCGTTAGGGGCGTCGCCAAGCTAGCGAATTTCTCCACTCGCTATCGACTTCACCTTGCAAACTCCAGCTGAAGTTGTGAAGGGTACATCCTTGTAGCACGCCACGAGCTCGCCGTTGCTGTGCAGGTCAGCTGATAGCTTCTCCCACGTCTTGCTCTTTGCGTTGAGAGACGCCTCAGGCTCTCCAGAGTACCCAGCAAAGGTCACCCTCTCCCCAACCGCTGCGGATTCTGGTGGCTCAACCAGCTCAACCTTTGTATGGTCCTCATTTGATGCAGCCAGAACCATTGCATGTGATTTTATACCGCGCATCGCCACTGGTTTCAGATTGCAGAGAACACACACTTTCCGGTTCTGCATTTCTTCAAGAGGGATGAATTTGACAAGGCCGCTAACAACTGTTCTTGGTGCTTCCTCTCCAACATCAATCTCCTCTACATACAGCGAATCAGCATCTGGATGCTTCTGTGCTTTCCTGATAAGCCCCACTCGAATATCCAACTTTGCCACCGTGACATCCACCTCTGCATTCTTTGATTTTGAACCACCTGATTGTTTTTTCTGTTCCTTCTTTTGACCTCCATCAGATAATTTTGTGCCCTTGAGCTTGTCAGCAACCTTCTTAGCTTCAGCATCAGCTTGTGCTTTTGAGCTCCTCTCAGCTTGGCTGCCTGCAAATTTATTCCTGAAGGACTCTACTTCTTCATCTTTCAGTTCTTTAAATAGAGGTGAAGGCTTTCCTATTTTGTGGCCTGCTGATACAAAATCCCAAGGTCTTTTTGCCTTGGCGATTTCTCCTTTATCGTCACAGAAAGACAAGCTTTCTTCAGGGGTCATATTTAATTGCAGCAACACTTCATTGGAAAATGAAGGCATGAAAGGCTCCAGCAAACAGGCAAGGAGATAGACCACACCAACTGAAGTTTTCATTACAACAGCACAGGCTGCTGGATCTTCCTTATAAAGTTTCCAAAACTGGCTCTCTTGCAGATATGCATTTCCATCACTAGAAATGCCCATAGCGCTCTTCAGTCCTTGTTTCAATTTAACCTTTTCCATTGCTTCAAGATATTGTTCAACCCATTTATTAGTTTTCTCAACAAGTGCCTTTGTCAGTGGATGCGACTCAGCGTTAGGAGCATCAGGTACGATGGAATCATATCCGGCTCCTGCTGGTTTTGCAACAAAACTGAGCACACGGTTGATGAAATTCCCCAAGTTGTTCAACAACTCACTGTTTAATTTGGCTTGCAAATCAGCCCAAGTAAATAGTGTATCTGATACCTCAGGACGATTTGTAAGCAAGTAGTAACGCCACACTTCAGGAGGTATATTTGTATCCTTCGCGTCATTACCAAAGACTCCAATACCATGGCTCTTGGAGAATTTTCCTGCTTCGTAGTTCAAATATTCAGTCACACTTATGGTCTTCATCATTGTCCACTTTTCGCCAGTTCCAAGTAATGTAGAAGGGAACATGACCGTGTGAAATGGCACATTATCTTTACCCATGAACTGAAACAATTCTACGTTATCAGGATCCTTCCACCATTTCTCCCAATCAGGTGTATAGGAAGCTGTGATAGATACATAGCCAATCGGTGCATCAAACCAAACATAGAACACCTTGTCCTTATATTTCTCATGTGGAACAGGAACACCCCACTTGAGATCTCGGGTGATACAGCGTGGCTTCAAACCTTCCTTCAGCCATGCGTTTGTTGCCTGAATAGCATTTTGACTCCACATACCAGCTACAGAAGTTTCATTGATATAGTTTACCAACTTGTCGCTCAAAAGAGGAAGCTCAAGGAATAAGTGATCTGTGTCACGGACACGTGGAGTATTCTTACAGACCTTACACTTGGGATCAATTAGCTCAGTTGGATTCAACAATTTGCTGCAGTTTTCACACTGATCACCTCGCGCCGCCTCATAATTACAGCCTTCAGTTGGACATTTCCCCTCCACGAGCCTATCCGCTAAAAATCGTTGGCAAGTATCACAGTACAGCTGCTGCATGGTGTTTTCTGTGAGCCAATTGTTTTCCATCAACTTTTGGAAAATTGCTTGGCAGACTTCAGTCTGTTGGGGAGAGGATGTCCGTCCAAACTTGTCAAACTTTATGTCAAACCATTTGTAAACCTCACTATGGACAGCATGATACTTGTCGCAGATCTCCTTGGGCGAGCACTTCTCCTCCATGGCCTTGGTCTCGGTGGCCGTCCCGTACTCGTCGGTGCCGCATATGTAGATGACGTTGTAGCCCCGCAGCCGGCAGTAGCGCGCGAACACGTCGGCGCTGAGCACGCAGCCGATGATGTTCCCGAGGTGAGGGACGTTGTTGACGTAGGGCAGCGCGCTGGTGACGAGGATGTTGCGGCGGCCGGGGACCGGCAGCTTCGGAGGCGGCGGCGGCGACGCCATGGGGTAGACGAGAGGAGGTTTAGGGTTGGGGAGGAGCAGGTGGGGGGAGTGGAGGCTGTCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0346200.1 | 6 | 18151559 | C | T |
| Osa06LNT0346200.1 | 6 | 18146737 | A | G |
| Osa06LNT0346200.1 | 6 | 18147137 | G | C |
| Osa06LNT0346200.1 | 6 | 18147432 | A | G |
| Osa06LNT0346200.1 | 6 | 18147489 | C | T |
| Osa06LNT0346200.1 | 6 | 18149113 | A | T |
| Osa06LNT0346200.1 | 6 | 18149318 | T | G |
| Osa06LNT0346200.1 | 6 | 18148138 | T | C |
| Osa06LNT0346200.1 | 6 | 18150329 | G | A |
| Osa06LNT0346200.1 | 6 | 18150803 | T | C |
| Osa06LNT0346200.1 | 6 | 18151243 | A | T |
| Osa06LNT0346200.1 | 6 | 18151321 | C | A |
| Osa06LNT0346200.1 | 6 | 18151553 | A | G |
| Osa06LNT0346200.1 | 6 | 18152720 | A | G |
| Osa06LNT0346200.1 | 6 | 18153906 | C | G |
| Osa06LNT0346200.1 | 6 | 18154242 | T | C |
| Osa06LNT0346200.1 | 6 | 18154479 | C | A |
| Osa06LNT0346200.1 | 6 | 18147287 | T | G |
| Osa06LNT0346200.1 | 6 | 18147645 | T | C |
| Osa06LNT0346200.1 | 6 | 18148222 | C | T |
| Osa06LNT0346200.1 | 6 | 18148403 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0346200.1 | osa-miR5814 | Translation | 5.0 | 17.514 | 1 | 24 |
| Osa06LNT0346200.1 | osa-miR6252 | Cleavage | 4.0 | 13.776 | 1 | 23 |
| Osa06LNT0346200.1 | osa-miR399e | Cleavage | 4.5 | 22.176 | 1 | 21 |
| Osa06LNT0346200.1 | osa-miR399f | Cleavage | 4.5 | 22.176 | 1 | 21 |
| Osa06LNT0346200.1 | osa-miR399g | Cleavage | 4.5 | 22.176 | 1 | 21 |
| Osa06LNT0346200.1 | osa-miR399i | Cleavage | 5.0 | 22.176 | 1 | 21 |
| Osa06LNT0346200.1 | osa-miR167d-5p | Translation | 5.0 | 19.576 | 1 | 21 |
| Osa06LNT0346200.1 | osa-miR167e-5p | Translation | 5.0 | 19.576 | 1 | 21 |
| Osa06LNT0346200.1 | osa-miR167f | Translation | 5.0 | 19.576 | 1 | 21 |
| Osa06LNT0346200.1 | osa-miR167g | Translation | 5.0 | 19.576 | 1 | 21 |
| Osa06LNT0346200.1 | osa-miR167h-5p | Translation | 5.0 | 19.576 | 1 | 21 |
| Osa06LNT0346200.1 | osa-miR167i-5p | Translation | 5.0 | 19.576 | 1 | 21 |
| Osa06LNT0346200.1 | osa-miR167j | Translation | 5.0 | 19.576 | 1 | 21 |
| Osa06LNT0346200.1 | osa-miR437 | Translation | 4.5 | 17.908 | 1 | 21 |
| Osa06LNT0346200.1 | osa-miR444d.3 | Translation | 5.0 | 15.517 | 1 | 21 |
| Osa06LNT0346200.1 | osa-miR2092-5p | Translation | 3.5 | 8.981 | 1 | 21 |
| Osa06LNT0346200.1 | osa-miR2905 | Translation | 4.5 | 21.165 | 1 | 21 |
| Osa06LNT0346200.1 | osa-miR5338 | Cleavage | 5.0 | 10.912 | 1 | 21 |
| Osa06LNT0346200.1 | osa-miR5338 | Translation | 4.5 | 10.97 | 1 | 21 |
| Osa06LNT0346200.1 | osa-miR5338 | Translation | 5.0 | 22.585 | 1 | 21 |
| Osa06LNT0346200.1 | osa-miR5499 | Cleavage | 4.5 | 21.408 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0346200.1 | 6 | tgw6.1 | Physiological trait | Source activity | RG264 | RM3 |
| Osa06LNT0346200.1 | 6 | qPHw6-2 | Resistance or Tolerance | Other soil stress tolerance | RG424 | RZ667 |
| Osa06LNT0346200.1 | 6 | qSFWd6 | Resistance or Tolerance | Other soil stress tolerance | RG424 | RZ667 |
| Osa06LNT0346200.1 | 6 | gp6 | Morphological trait | Panicle/flower | RZ667 | RG424 |
| Osa06LNT0346200.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Osa06LNT0346200.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0346200.1 | 6 | qLVBTL6-1 | Morphological trait | Panicle/flower | RZ667 | RG424 |
| Osa06LNT0346200.1 | 6 | qRS6-1 | Morphological trait | Shoot/Seedling | RZ667 | RG424 |
| Osa06LNT0346200.1 | 6 | qGY6-1 | Morphological trait | Seed | RZ667 | RG424 |
| Osa06LNT0346200.1 | 6 | qLVBSL6-1 | Morphological trait | Panicle/flower | RZ667 | RG424 |
| Osa06LNT0346200.1 | 6 | qSL6-1 | Morphological trait | Culm/leaf | RZ667 | RG424 |
| Osa06LNT0346200.1 | 6 | qTL6-1 | Morphological trait | Culm/leaf | RZ667 | RG424 |
| Osa06LNT0346200.1 | 6 | qHD-6-1 | Physiological trait | Flowering | RG424 | RZ667 |
| Osa06LNT0346200.1 | 6 | nan | Physiological trait | Eating quality | RM253 | RM162 |
| Osa06LNT0346200.1 | 6 | qPH2-6-1 | Morphological trait | Dwarf | RG424 | RZ667 |
| Osa06LNT0346200.1 | 6 | qTN2-6-1 | Morphological trait | Culm/leaf | RG424 | RZ667 |
| Osa06LNT0346200.1 | 6 | Pi-d2 | Resistance or Tolerance | Blast resistance | RM3 | RM527 |
| Osa06LNT0346200.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0346200.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)