© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0346800.1
GCAGAATATAAGTTTGTAGGATAGCATTTCATAATTACCTGCTTCAATATCCTATTTATCGAATATGGGGTAACAGAGTCATCTAAAACACCGCCAAGCAATGATAAAGCAATCATAGGCTTTATTTCCTCCATGATCTTATCAACTTTCTTTATTGAACTCGACCAACACAACAAACCCCATAAATTAATCTAACAACGCATCAATAATAGCATGTACATCATCTATAATATCTGCATTCTACGCATCATTGTCATTTCTGGTAGAAAGCTTGGCAATCCTAATAAAAAGTATATCCTTACAGTGCATATCCTGTTGGCAGAATGCTTTCATATAAGCTTTCTGTTGATAGCCTTGTAGTGATGCCTAGCATGATTTTTTTTCCATCGATGTCATTCTATCAAGCTAGGTAAAGTGGCACCACCATATCATATAATATATAATGTAGCAGTACAACCAATAAACATGGAATTTCTGGCAACTGAATTCATATTAAATAATCTGAAGTAAAGAAAATTCTCTTAATAGAAGTGAGGCATAATTGCATATGATCATTAGAATATAATTAGGCTTTTGTTAACCGTGCCGTGGTAAAGAAGATGAATGGTGTCCTGCAAGATGAATCTCCCTGCTGAAACTGTGAGTACCCCTGCATATTGTTTGTGTTCTTCAAACTTGAATCCATAAAACTTTTAGTTGTGCGTTTGCTTGTTAATTTGTTCTGGTTTGCTGCCAACCTTGTTGGTGTCTCCGATTACTCAGCAAGACCTTCTAGCTAAATATGTCAGGGAGGTCAAGTAGACAAGAATTAAGCAAATTCCACCATAACTACTGAAGATAGATCTTGTGTTGTTGATTGCAGTGGACAAAGAAACGTCGTCTTGAGCTTCAAGAAGGGACGACGGTGCCCAGAACCTCAGGTGAAGCAGATCTGGTGAGCACAGATGCAGGTGGCTCCCTAGGAGCGATGAGGTCGTGCTCTTGGTGATGAATCGCAGCCAAATGCGACCTCCCTGCAGGAACCACCTTGGGGGCGTGGAGATGGTGGATTCATGTGGGATGGGCCACATGGATGAACCACCGGGGGCAATACATCGTGGATGATGTGGGGGAGATGGAGGAGGGGACAGGAGGAGGTGGTGGCGCTGCTGGTTGGAGAGGAAGCGGCGGCGGCGCTGCTGGTTGGGGGAGGAGATGAGGCGGAGGCGGAGGCGGTGCTGCTACCTGCTAGGTCTTGGAGTGGGGATTTTTTCAGGTTTCTGAGAGAGAGCGTGTGAGAGAGAAGAGAGGTCTGTTTGTTTGGAGTTTTGGTGCT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0346800.1 | 6 | 18946945 | T | G |
| Osa06LNT0346800.1 | 6 | 18947184 | A | G |
| Osa06LNT0346800.1 | 6 | 18947360 | T | C |
| Osa06LNT0346800.1 | 6 | 18947456 | T | C |
| Osa06LNT0346800.1 | 6 | 18947470 | A | T |
| Osa06LNT0346800.1 | 6 | 18947500 | A | G |
| Osa06LNT0346800.1 | 6 | 18947781 | A | G |
| Osa06LNT0346800.1 | 6 | 18947825 | A | G |
| Osa06LNT0346800.1 | 6 | 18949089 | A | G |
| Osa06LNT0346800.1 | 6 | 18949107 | C | T |
| Osa06LNT0346800.1 | 6 | 18949123 | T | C |
| Osa06LNT0346800.1 | 6 | 18949269 | T | G |
| Osa06LNT0346800.1 | 6 | 18949751 | A | G |
| Osa06LNT0346800.1 | 6 | 18949807 | A | G |
| Osa06LNT0346800.1 | 6 | 18950139 | C | T |
| Osa06LNT0346800.1 | 6 | 18950291 | A | G |
| Osa06LNT0346800.1 | 6 | 18950430 | T | C |
| Osa06LNT0346800.1 | 6 | 18950579 | A | G |
| Osa06LNT0346800.1 | 6 | 18950675 | A | G |
| Osa06LNT0346800.1 | 6 | 18953012 | T | G |
| Osa06LNT0346800.1 | 6 | 18953041 | G | A |
| Osa06LNT0346800.1 | 6 | 18953164 | T | C |
| Osa06LNT0346800.1 | 6 | 18953229 | T | C |
| Osa06LNT0346800.1 | 6 | 18947323 | A | G |
| Osa06LNT0346800.1 | 6 | 18950131 | G | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0346800.1 | osa-miR5530 | Cleavage | 4.0 | 18.013 | 1 | 21 |
| Osa06LNT0346800.1 | osa-miR1437b-5p | Translation | 4.5 | 11.35 | 1 | 21 |
| Osa06LNT0346800.1 | osa-miR166k-5p | Translation | 3.0 | 2.093 | 1 | 21 |
| Osa06LNT0346800.1 | osa-miR816 | Cleavage | 4.0 | 21.284 | 1 | 20 |
| Osa06LNT0346800.1 | osa-miR2920 | Cleavage | 4.0 | 12.156 | 1 | 23 |
| Osa06LNT0346800.1 | osa-miR2930 | Cleavage | 3.0 | 14.915 | 1 | 22 |
| Osa06LNT0346800.1 | osa-miR5159 | Cleavage | 5.0 | 13.44 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0346800.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0346800.1 | 6 | gp6 | Morphological trait | Panicle/flower | RZ667 | RG424 |
| Osa06LNT0346800.1 | 6 | qRS6-1 | Morphological trait | Shoot/Seedling | RZ667 | RG424 |
| Osa06LNT0346800.1 | 6 | qGY6-1 | Morphological trait | Seed | RZ667 | RG424 |
| Osa06LNT0346800.1 | 6 | qLVBSL6-1 | Morphological trait | Panicle/flower | RZ667 | RG424 |
| Osa06LNT0346800.1 | 6 | qLVBTL6-1 | Morphological trait | Panicle/flower | RZ667 | RG424 |
| Osa06LNT0346800.1 | 6 | qSL6-1 | Morphological trait | Culm/leaf | RZ667 | RG424 |
| Osa06LNT0346800.1 | 6 | qTL6-1 | Morphological trait | Culm/leaf | RZ667 | RG424 |
| Osa06LNT0346800.1 | 6 | nan | Physiological trait | Eating quality | RM253 | RM162 |
| Osa06LNT0346800.1 | 6 | qHD-6-1 | Physiological trait | Flowering | RG424 | RZ667 |
| Osa06LNT0346800.1 | 6 | qPH2-6-1 | Morphological trait | Dwarf | RG424 | RZ667 |
| Osa06LNT0346800.1 | 6 | qTN2-6-1 | Morphological trait | Culm/leaf | RG424 | RZ667 |
| Osa06LNT0346800.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0346800.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0346800.1 | 6 | tgw6.1 | Physiological trait | Source activity | RG264 | RM3 |
| Osa06LNT0346800.1 | 6 | qSFWd6 | Resistance or Tolerance | Other soil stress tolerance | RG424 | RZ667 |
| Osa06LNT0346800.1 | 6 | qPHw6-2 | Resistance or Tolerance | Other soil stress tolerance | RG424 | RZ667 |
| Osa06LNT0346800.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)