© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0346900.1
GCTCGCTTTCCCAAACGTCGGCTTCAACTTCCACGAAGAGCGGATCTTCCGAAGCTGCAGCGTCATTGGCAGGGTTGACGCCACGGTTCTTGAGCTCGCGGTACATCTGGCTGAGGGAACATCTGTCACAGAAGAGCTGCAGACAGCAGTCGGCGCAGGGCTCCGGCGCCATGCCGAACGTGGCGCGGAGCTTCTGGCGGTAGGACCAAGAGTACATGGTGTGCATGCCTGGGAGCACCGTGCTCGGCCGCATCCAGCAGTAGGTGATGCCTGCTATGGCGCAAGAGATGCTGCCCCTGTCGAGGGTCTCGGCGATAAGGCCGAAGGCAACGCACGGGCAGAAGAACGTCAGGCAACAGCTGTTGCAGTCGTCGCAGCAGTCGCAGAGGCCGGTGGTTCATGCCTGCCCGACCGGCGCCTCCGGCGAATCTCCGGCCATCTTAATTAATTACCTAATTTTCAAGGTATAGCGCTACTACCTAACTTGCTTGCTCGCTCAAAACTTACTTGATCTAGCTAGAAAACTATATATGCATATGTATATAGTAGCATTAGCAATGCAAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0346900.1 | 6 | 19148949 | T | C |
| Osa06LNT0346900.1 | 6 | 19147100 | G | C |
| Osa06LNT0346900.1 | 6 | 19147216 | G | A |
| Osa06LNT0346900.1 | 6 | 19147239 | A | G |
| Osa06LNT0346900.1 | 6 | 19147286 | A | T |
| Osa06LNT0346900.1 | 6 | 19147396 | C | T |
| Osa06LNT0346900.1 | 6 | 19147499 | T | C |
| Osa06LNT0346900.1 | 6 | 19147532 | A | G |
| Osa06LNT0346900.1 | 6 | 19147638 | C | T |
| Osa06LNT0346900.1 | 6 | 19147642 | T | C |
| Osa06LNT0346900.1 | 6 | 19148431 | T | C |
| Osa06LNT0346900.1 | 6 | 19148853 | T | C |
| Osa06LNT0346900.1 | 6 | 19149064 | T | C |
| Osa06LNT0346900.1 | 6 | 19149228 | G | A |
| Osa06LNT0346900.1 | 6 | 19149231 | T | C |
| Osa06LNT0346900.1 | 6 | 19149574 | T | C |
| Osa06LNT0346900.1 | 6 | 19150183 | T | C |
| Osa06LNT0346900.1 | 6 | 19151083 | A | G |
| Osa06LNT0346900.1 | 6 | 19152554 | T | C |
| Osa06LNT0346900.1 | 6 | 19152608 | A | G |
| Osa06LNT0346900.1 | 6 | 19152964 | A | G |
| Osa06LNT0346900.1 | 6 | 19153142 | A | G |
| Osa06LNT0346900.1 | 6 | 19153237 | T | A |
| Osa06LNT0346900.1 | 6 | 19153456 | A | G |
| Osa06LNT0346900.1 | 6 | 19153594 | C | T |
| Osa06LNT0346900.1 | 6 | 19153767 | T | A |
| Osa06LNT0346900.1 | 6 | 19154036 | T | C |
| Osa06LNT0346900.1 | 6 | 19154097 | G | A |
| Osa06LNT0346900.1 | 6 | 19154552 | C | T |
| Osa06LNT0346900.1 | 6 | 19155232 | A | G |
| Osa06LNT0346900.1 | 6 | 19155418 | T | C |
| Osa06LNT0346900.1 | 6 | 19155431 | A | G |
| Osa06LNT0346900.1 | 6 | 19155530 | G | A |
| Osa06LNT0346900.1 | 6 | 19155716 | A | G |
| Osa06LNT0346900.1 | 6 | 19156230 | T | C |
| Osa06LNT0346900.1 | 6 | 19156294 | T | C |
| Osa06LNT0346900.1 | 6 | 19156391 | C | T |
| Osa06LNT0346900.1 | 6 | 19157591 | A | G |
| Osa06LNT0346900.1 | 6 | 19157601 | A | G |
| Osa06LNT0346900.1 | 6 | 19157608 | G | A |
| Osa06LNT0346900.1 | 6 | 19157629 | A | G |
| Osa06LNT0346900.1 | 6 | 19157996 | T | A |
| Osa06LNT0346900.1 | 6 | 19158034 | A | G |
| Osa06LNT0346900.1 | 6 | 19150643 | G | C |
| Osa06LNT0346900.1 | 6 | 19149931 | A | G |
| Osa06LNT0346900.1 | 6 | 19149966 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0346900.1 | osa-miR167e-3p | Cleavage | 5.0 | 24.819 | 1 | 21 |
| Osa06LNT0346900.1 | osa-miR167i-3p | Cleavage | 5.0 | 24.819 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0346900.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0346900.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0346900.1 | 6 | tgw6.1 | Physiological trait | Source activity | RG264 | RM3 |
| Osa06LNT0346900.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0346900.1 | 6 | qPHw6-2 | Resistance or Tolerance | Other soil stress tolerance | RG424 | RZ667 |
| Osa06LNT0346900.1 | 6 | qSFWd6 | Resistance or Tolerance | Other soil stress tolerance | RG424 | RZ667 |
| Osa06LNT0346900.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Osa06LNT0346900.1 | 6 | nan | Physiological trait | Eating quality | RM253 | RM162 |
| Osa06LNT0346900.1 | 6 | qRS6-1 | Morphological trait | Shoot/Seedling | RZ667 | RG424 |
| Osa06LNT0346900.1 | 6 | qGY6-1 | Morphological trait | Seed | RZ667 | RG424 |
| Osa06LNT0346900.1 | 6 | qLVBTL6-1 | Morphological trait | Panicle/flower | RZ667 | RG424 |
| Osa06LNT0346900.1 | 6 | qTL6-1 | Morphological trait | Culm/leaf | RZ667 | RG424 |
| Osa06LNT0346900.1 | 6 | gp6 | Morphological trait | Panicle/flower | RZ667 | RG424 |
| Osa06LNT0346900.1 | 6 | qLVBSL6-1 | Morphological trait | Panicle/flower | RZ667 | RG424 |
| Osa06LNT0346900.1 | 6 | qSL6-1 | Morphological trait | Culm/leaf | RZ667 | RG424 |
| Osa06LNT0346900.1 | 6 | qTN2-6-1 | Morphological trait | Culm/leaf | RG424 | RZ667 |
| Osa06LNT0346900.1 | 6 | qHD-6-1 | Physiological trait | Flowering | RG424 | RZ667 |
| Osa06LNT0346900.1 | 6 | qPH2-6-1 | Morphological trait | Dwarf | RG424 | RZ667 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)