© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0347500.1
TCAGTTGCTGTTGGTTGATTTTCCATGGTGAAACTGCAGCACGATGCATGTGATGTTGTCTAAGGTAAGCCGAGAGTGGGCGACTTCTGTCAGCTTCATGGCTGCTGCTTTGGGTCCATCTTGCGCTTTCAAAAGAGAAACAGCATCCTTGTTGACAAAAGATGTAAAATGCTAGTTAGCATTGGACCGAATGAGATACGCGCTCGCACGAGGGCAAAGCTCATTTCGCATAACATCCCAAAGGCCATCAGTAGCAAGAATCAGGTATTCCAAGCTTTCATCGACCACTTTTTCCTGAATATCTGGTTCTGCTTTCACATAGTGCTTCAATGCACGGTTGCCAAATGCACGGGACATTGCCAAAAGTCCATTAACCCTCCATGTATCATCGAAAACAACAATACCTCCGGCATCCTCAATTCTCTTCTGCTCATCTTTTCTGTTAGGTTTATGATCTTCTGACAGTGGGACAGCTTTGCCAGCTTTTAGAGCGACAACACGTGAATCACCAACATTACCAACATATAGGTGGTTGCCAACCAAAATAGCAGTCACAGCTGTTGAACCATCATCCCTAAAAGGATTAGAAGACACTGACTCTAGGAAATCAGCATCAGTTTTCAGGAACGTTTGGCTTATAGCAAGCTTTGTGTCTCTAAGGAGCTCAGGGTGATTCACAAGGTTTTCAAACAAATGTTCCTTAAGATATTCAGCAGCAAGTGATCCTCCATGACCATCAAATACACCAAATAGGCTGACTGTCTGTTCGTTGATCGTAGTCATCTTTATGCTAAACCGATCCTCCATAGAAGGCCTCCTCCCCTTGAAACTTGAATAATCCCAGCTAAGTCTACCATCCTCACTCGCGGAGCCGCCGGTAATCCAGCCGTTGGACTGCGACGGCGACCGCGTGCGCGCAGCCGACCCCGCGGCCCGCCGGGCCTGCATCCGCGGCGGAGCAAACGACGACGACGACGAGGAGCCGCAGCCCACCCCGCAGAACCCCGGCCAGCCGGGGAGCCCGCGGGAGGCCGCTGGAGTACCGCCGGGGGAGGGGGAGGCGGCGACGCGGCGCCCACGCCCCGCCGCCTCAATGCCGACCAGAGCCCGCAGGCCGGCGGCGCGCGCCAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0347500.1 | 6 | 19532138 | A | G |
| Osa06LNT0347500.1 | 6 | 19533623 | C | A |
| Osa06LNT0347500.1 | 6 | 19533912 | C | T |
| Osa06LNT0347500.1 | 6 | 19540618 | G | T |
| Osa06LNT0347500.1 | 6 | 19541535 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0347500.1 | osa-miR156a | Cleavage | 3.0 | 14.548 | 1 | 20 |
| Osa06LNT0347500.1 | osa-miR156b-5p | Cleavage | 3.0 | 14.548 | 1 | 20 |
| Osa06LNT0347500.1 | osa-miR156c-5p | Cleavage | 3.0 | 14.548 | 1 | 20 |
| Osa06LNT0347500.1 | osa-miR156d | Cleavage | 3.0 | 14.548 | 1 | 20 |
| Osa06LNT0347500.1 | osa-miR156e | Cleavage | 3.0 | 14.548 | 1 | 20 |
| Osa06LNT0347500.1 | osa-miR156f-5p | Cleavage | 3.0 | 14.548 | 1 | 20 |
| Osa06LNT0347500.1 | osa-miR156g-5p | Cleavage | 3.0 | 14.548 | 1 | 20 |
| Osa06LNT0347500.1 | osa-miR156h-5p | Cleavage | 3.0 | 14.548 | 1 | 20 |
| Osa06LNT0347500.1 | osa-miR156i | Cleavage | 3.0 | 14.548 | 1 | 20 |
| Osa06LNT0347500.1 | osa-miR156j-5p | Cleavage | 3.0 | 14.548 | 1 | 20 |
| Osa06LNT0347500.1 | osa-miR399a | Cleavage | 4.5 | 19.89 | 1 | 21 |
| Osa06LNT0347500.1 | osa-miR399b | Cleavage | 4.5 | 19.89 | 1 | 21 |
| Osa06LNT0347500.1 | osa-miR399c | Cleavage | 4.5 | 19.89 | 1 | 21 |
| Osa06LNT0347500.1 | osa-miR399d | Cleavage | 4.5 | 19.89 | 1 | 21 |
| Osa06LNT0347500.1 | osa-miR399e | Cleavage | 3.5 | 19.89 | 1 | 21 |
| Osa06LNT0347500.1 | osa-miR399f | Cleavage | 3.5 | 19.89 | 1 | 21 |
| Osa06LNT0347500.1 | osa-miR399g | Cleavage | 3.5 | 19.89 | 1 | 21 |
| Osa06LNT0347500.1 | osa-miR399j | Cleavage | 4.5 | 19.89 | 1 | 21 |
| Osa06LNT0347500.1 | osa-miR156l-5p | Cleavage | 4.0 | 14.548 | 1 | 21 |
| Osa06LNT0347500.1 | osa-miR167h-3p | Cleavage | 5.0 | 16.093 | 1 | 21 |
| Osa06LNT0347500.1 | osa-miR815a | Cleavage | 4.0 | 9.219 | 1 | 21 |
| Osa06LNT0347500.1 | osa-miR815b | Cleavage | 4.0 | 9.219 | 1 | 21 |
| Osa06LNT0347500.1 | osa-miR815c | Cleavage | 4.0 | 9.219 | 1 | 21 |
| Osa06LNT0347500.1 | osa-miR1424 | Cleavage | 4.0 | 19.337 | 1 | 21 |
| Osa06LNT0347500.1 | osa-miR5526 | Cleavage | 4.5 | 23.417 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0347500.1 | 6 | qPHw6-2 | Resistance or Tolerance | Other soil stress tolerance | RG424 | RZ667 |
| Osa06LNT0347500.1 | 6 | qSFWd6 | Resistance or Tolerance | Other soil stress tolerance | RG424 | RZ667 |
| Osa06LNT0347500.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Osa06LNT0347500.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0347500.1 | 6 | gp6 | Morphological trait | Panicle/flower | RZ667 | RG424 |
| Osa06LNT0347500.1 | 6 | qRS6-1 | Morphological trait | Shoot/Seedling | RZ667 | RG424 |
| Osa06LNT0347500.1 | 6 | qGY6-1 | Morphological trait | Seed | RZ667 | RG424 |
| Osa06LNT0347500.1 | 6 | qLVBSL6-1 | Morphological trait | Panicle/flower | RZ667 | RG424 |
| Osa06LNT0347500.1 | 6 | qLVBTL6-1 | Morphological trait | Panicle/flower | RZ667 | RG424 |
| Osa06LNT0347500.1 | 6 | qSL6-1 | Morphological trait | Culm/leaf | RZ667 | RG424 |
| Osa06LNT0347500.1 | 6 | qTL6-1 | Morphological trait | Culm/leaf | RZ667 | RG424 |
| Osa06LNT0347500.1 | 6 | nan | Physiological trait | Eating quality | RM253 | RM162 |
| Osa06LNT0347500.1 | 6 | qHD-6-1 | Physiological trait | Flowering | RG424 | RZ667 |
| Osa06LNT0347500.1 | 6 | qPH2-6-1 | Morphological trait | Dwarf | RG424 | RZ667 |
| Osa06LNT0347500.1 | 6 | qTN2-6-1 | Morphological trait | Culm/leaf | RG424 | RZ667 |
| Osa06LNT0347500.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0347500.1 | 6 | tgw6.1 | Physiological trait | Source activity | RG264 | RM3 |
| Osa06LNT0347500.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)