© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0348100.1
CCGAAAGAGATTATAAGGCAATGATTTGTTGTATCTGAAGCCTTTAAAGTACAACAATTGATCTCTCCCTTCACTTGCAGCCATATGTCTATACAATTGTCCACGCCAGAGTGCAATGAAAGTGGATTTTGTGGTGATGGTGATTCTTCTCCTACTGACAGTATCCCCAATCATCAAAGCCCAAGTTGTCATGATGTTACAGAGTTATAGAATACGCAGTGATGCATTTGAATTAATAAGGATCAGATAATTGCTAAGATTCCAGTGCATGTCACTGGGTAGGCCAAGGGGAATTGGTGTGCATCACCTGTTCATGCAAATGGATTTGGTGTAGAGTTTCCAACAACATTATCCATTGCAATAGGCCAAGGGGCACCGATCAGTGGCCACCTGCATACATACACATATTGAAATTAGTTCATCAGTCAAGATGATCACTGGTTATCTTGGGCTCTATCAGTTGTTCATAGCAAGAGGACAACTCATGTGCATGATCAAATTATCATGTAGACGATGGAAATAAGTGTCCCACCAGCTTTAGGCTCTATCATAATGCATGTTTACCTGCAGGAAAGTGTACTAAATTATTGAAAAGTTTGAAGTGAATCTTATTTCCATATTCTACTGCATAGAAACAAAATTCAAGGAAGAAATTCATATAACAGTCTTCTCCTTTTTGTCTCTGCCTCCATTAACAGAAATTCCAAAGCTCCATATGAATGCCCTATAGGACAATAGGACACTGCACATAAATATGTCATCAATTTCTCATATTCTTATTTGTAGAACTGCATTACAGGGAGGAATACAATAGCCCATGGCTAGCATAATTCTCATGGAGGTAGATTTCAAACAGATCAAAATAGCAGAACTATAATGACTCATATGAGCAAGCCCGTGATTAGTCGATGGAGAGCATGTTTTGGAATATATATCACAGGAAATAATATATAATATCTATTGTAATATACAATGTGACACCCAACTATTAGTCCATTTAAGTCAGTAATTCATGGAAAAAAAAGGTGCATACACTGTCTAATTATAGCTCACAGTCCACTTTCCCTGTCTCTTTGCGCCCTTCCTCTTCCCCTGCTTTTCCTGTGAGCCATCGAGCTGCCACCACTGGACATACCAAGGAGTAAAAATTAAAATTGTGCCATCAGTATTCAGTAACTTACAAAACAAATAGCTTTATTTGATGAGAGGCATATACATGGATATTGCAAAGTTTTATTCACTCCAAATCTGAAGATGTACACATTGGCCTAAATCTATATAAATCTCAAGACATAAACAGGTGACCTTATATAAACCTCAAGATATACACAGGTGACCAAAATATTGACACAATAATTGATTTACTTTTCCACTTAAACTAAAAAGGTTGTGTATGGTCCAAACAGAATGAAAAACAGTCACAGAAATTTTTTCAGTAGAGAGATGGGTACCATTCCCTGGTCTCCGAAGCAGACTACCGTTCCAAAGGTCATATAAAGTGCAGACGACATCAATCCAAAGTGGCAAGCAGAATGATCTATACATGGATGTGTTAAACTTAACTCGACCCTGTCAAGCCATCAACTCTGATTCGATGAACATTCATTCTTTTTTATATATATATCCTCGATTAAAATTTCTGATAACTATTGAAATACATAATTGCCAAGCCTACTCCTTTTTCCCAAGTTATGTTTTCTAATAACGTCTAAGCAGTAAAACTTTGTGTATATAGAATGATCTTCTTCAAATTTTGTGCATATAGAATGATCTTCTTTTTTTTGCCCTGCCTCCCGTTTACCTATTACTCTTTACGTCGGCTCCATCTGTGGCCGATGGGGAAGAGGGACGACCTCGTCTCCAGCGTGGCCAGCGGTGGAACCATATCTTGCACTGTTGCAGAGTTAGGCATTTTGCAACATTACACATTGGGTTAGCATCAAGGTTGAACCATATATTGGGAGGAAAATTATGCTAGCTTTACTTGCATCGTAATGTAGAAAGGAAATATCGTTGACTCCTTGGCTCATAGCACAACAAAGTTTCAGTTAATAATTAACGCATGAAGAAAGATAAAAGAAAAAACAATGTGCCTGTGCTTACCACCATGGCGAGTGAGACCAACAAATCGAAGGGCGCAGCACGACGGTAAGTCGTAATCACGAAAGCCAATAGAGCAACTCAGTCGTCAGAAGCAGTCGGCAGACCACCAATCACATGAAGGGTGGAAGAAGCAAATTCCATCTGAGGGTGAGAAGGGAGGAGATCACCGGCGAGGAGACCCATGCGACAGGGAAGGAGCAGGAAGCCCGACGAACTTCTTGTGTGGCGCCGCGAGTGACGACGATCTTCCTGGGCGGCACCGAGGTCAAGGGATCCCATCGAAGTCGAGCTGAGCCTTGATCGCCTGTGGGAAGGGGGAGGGGGGTGCGACACGGGGATTCCGGGCACGACCTGCACACTGCACAGGTAGGGTAGGGGTAGGCAGTGGGCGATGAACGGCGCCGAGCTCCGCTGAGCCATCGGAGTGGAGAGGATGCGCAAAGAGCGCATGGCCGGCGCGGCGGAGGGGACGGCTGAAGTGGAGTCGGAGGGATGACGGGGCGACGGCGGAGGGATGACGGGGCGACGGCGGCGCGGCGCGTTGGCAGCGTTGGGGGTGGTTGGCGTGAGGGTGGGGATTTTTGGGTGAGTGCAAGAGAGAGAATGGGAGAGGTGGCGTGATTTTCGGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0348100.1 | 6 | 20822204 | C | A |
| Osa06LNT0348100.1 | 6 | 20823850 | T | C |
| Osa06LNT0348100.1 | 6 | 20824821 | A | G |
| Osa06LNT0348100.1 | 6 | 20824848 | A | G |
| Osa06LNT0348100.1 | 6 | 20825024 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0348100.1 | osa-miR5541 | Cleavage | 3.5 | 17.719 | 1 | 21 |
| Osa06LNT0348100.1 | osa-miR5834 | Cleavage | 5.0 | 14.912 | 1 | 21 |
| Osa06LNT0348100.1 | osa-miR5079b | Cleavage | 4.5 | 13.009 | 1 | 22 |
| Osa06LNT0348100.1 | osa-miR397a | Translation | 4.0 | 9.621 | 1 | 21 |
| Osa06LNT0348100.1 | osa-miR397b | Translation | 4.5 | 9.621 | 1 | 21 |
| Osa06LNT0348100.1 | osa-miR397b | Translation | 5.0 | 16.595 | 1 | 21 |
| Osa06LNT0348100.1 | osa-miR159a.1 | Cleavage | 5.0 | 11.527 | 1 | 21 |
| Osa06LNT0348100.1 | osa-miR159b | Cleavage | 5.0 | 11.527 | 1 | 21 |
| Osa06LNT0348100.1 | osa-miR1859 | Translation | 5.0 | 11.404 | 1 | 22 |
| Osa06LNT0348100.1 | osa-miR1865-3p | Cleavage | 3.5 | 18.939 | 1 | 24 |
| Osa06LNT0348100.1 | osa-miR2098-5p | Translation | 4.5 | 12.566 | 1 | 20 |
| Osa06LNT0348100.1 | osa-miR2868 | Cleavage | 3.0 | 13.201 | 1 | 20 |
| Osa06LNT0348100.1 | osa-miR2878-5p | Cleavage | 4.5 | 13.038 | 1 | 24 |
| Osa06LNT0348100.1 | osa-miR2918 | Cleavage | 4.5 | 10.649 | 1 | 21 |
| Osa06LNT0348100.1 | osa-miR5079a | Cleavage | 4.5 | 13.009 | 1 | 22 |
| Osa06LNT0348100.1 | osa-miR5150-5p | Translation | 4.5 | 18.051 | 1 | 24 |
| Osa06LNT0348100.1 | osa-miR5160 | Cleavage | 4.0 | 14.032 | 1 | 22 |
| Osa06LNT0348100.1 | osa-miR5502 | Translation | 4.5 | 14.126 | 1 | 22 |
| Osa06LNT0348100.1 | osa-miR166g-5p | Translation | 3.5 | 9.206 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0348100.1 | 6 | RPLD4 | Physiological trait | Eating quality | RG424 | RG172 |
| Osa06LNT0348100.1 | 6 | nan | Physiological trait | Eating quality | RM253 | RM162 |
| Osa06LNT0348100.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0348100.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0348100.1 | 6 | tgw6.1 | Physiological trait | Source activity | RG264 | RM3 |
| Osa06LNT0348100.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Osa06LNT0348100.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0348100.1 | 6 | gw6 | Morphological trait | Panicle/flower | RG424 | R2549 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)