© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0348700.1
AAGGACCAGTCTGCAAATATCTTATATTACAAGGGAAGATCCGAGTACACAGGAGCATTGAGAAACAAAGATGAGCAGCACAGCAGCTATCTCTATAATCTAGACCTACAGCAGAGGCAAGGGCATCTCTGAGAAGCAAACAGGTCGACCCAGAGATGCCATACACAAGTTCAATTCAGCACCCATACAATGATGAAGCCAGAAGCTAGATGCTCCACGGTTAAAGACAAAACGACACATGTCGTTATGGAGCACAAGCAAAGCTCTGTAAAACTTGCCGTAGATCTAGGGGGTTCTCAGCACAGGATTCTACGATCTTCCCTGTAATAAAGCTCCCCTGATTGCTGCCCTTATCATTGCTTGACATGATGATCTTATCGCCATCTTCCCTTAACAGCCCCCCTTGCTTGCAGATCTGTGTCGAAAAGGAAACTTTGTAAGTCGAGCAACTTACCATAGACTCCTCCAGCAGATGCTCTCTATCTTTTTGTCCTTTTTACACCGTTTTCCAACCTCATGCAGTTGATGTCAGACTAACCCTCAATGATGCCTTCTGTGGCGCATCCGAGTTCACACCTCTAACTCTTCGGGAAGACCAGTTTGAACGACTCCATTTCCACCGAAATGCACATTTTCAACCAGGGCACTTCCCATGTCCTCGGCTCTCTCCAATAGCTCCCCACTTTTGTTGCCTCCCAAGCTTTCACTTCCAACGAGCTCTGACACAACCTTTTCTGCCACACGTTTCAAAGATACAGCTACAGTTGTAGTGGTGCAGTTCTTCATATTGGAACCACAGTTATCATGCTCTTTAGTAGCATCACTAGGACAAACCGCTTCCACTCCCACACACTTGGAGCCTGATGTAACAGAGTCCAGACTTTTTTCAGATGCCAGTGGTGAATTCAAGCAATTTGCTTGTTCTAGATTGCCATTGGCAAGTGAAACCGGACTTCCACCACTTGCACCGGAAGCATCAGCAATATTGCCTGATGGAGGCGATGAAGTTTTCTGGTGAACTGGGCTAATTGAGGGGCTAATTGAGGCCCTCTTAACAGATCTACCAGGTTCACTATCATAAACCCCAGCTGTATCATGCTTTCGCTTGGGCTGCCCATCTGGGGATCTATTCGCTGTGCCATCTTCAACATCATTTTTATTAGACTGCTGGGGATGATTTATATGCCTCGAAGGACGAGGTCTCTTGTAGCCCTCTGGAAACACATAAGATGGAATCTGCTTCCTCCGAACATGAGATACAGCCAACTCCATCCCAGGTCTCCAGTACCCATACATGCCGATATCATGCCTAAATTCATCTACTGTTCCACGAATATCAAACTGTTGACCCTCCTGTATTTTTGCACCTTCTTTCCTTGATAAACCCATGAAAAAAGCACAATGAGCACATTGTCTGGAAGGGTCAGCATACTCATGTGGGTAAGGATGGCATTGTAACATTCCATATGTGTCTCTTTCAATCTTTAAAGTAAGTTGTCTTAACCGAGATTCAACCCATCCCTTCCAAAGTCTAAGATCTTCTCCATCTTCAGCGATGATGTCAACCTGGAGATAATTCTTATATGCTTCAAAAAATTGGAAAGGCTCAAAAAGAGCAGACCAATTAGCCTTACTGATATCGATTTCCTGGCAAATTTTGTTACCAAACTGGAATTGCTCCATCATAACCCTAAGTGTGCTTGTTGAAACATTATAGCTGGAGTTCATGCACGGGTAAGCAGGGGTTATTATGGGCATATGATGAGATCTGTCACGGTGATATTTGCGTGGATCCCACACAGGAAAACCAAGTTCATCCTCCTCAATAGCACAAAGCATCACGGGATTTGGCCATTGCCATTGAGTAAAAACTCTAAAGAATCTTGAGACAAGCATACTTGGCACAGCATTAGGGTAGAGCTGGCAGACACGTGCAACAAGTAAAGCCCAATTGACACCGCCAAGAAAACCAGTAACATTAGAGTAAACTCCTCTTTTTTTCGCCCAATACTTCAAACACCTTAGCGTTGTTCGAAAGTTCTCAACATTTGGAACAAGCCTAAGAATCTGGTCAGCTACTCTGCACCCATTAAGACTGCGAACAGTTACTTCATCAACATCATACAGTACTGATCCTTGCGAGATATCCAAGTCTGGTGGTACTACTAAGAGAGAGACACTCGCATAAAGAAGGTCAATTGATATTCCATGGAATTTAAATTTCATAACAGGAACATGTGCATCAGGTACAGGTTGCAACTCAGTAACTTCCTCTGTTTGTGCCAATATGTCATGTAGTACAATAAAGAAATCCTCCTCACGATTCACATATGAAGGCCCAACACATAAAGTATCAATGTCAGCTCCAGGGCCATGAACCCCTAAACGGTATGATCCAAACGTGAAGAGTACAGCATTTGCTTCTTCAACCATCTGATCAGTGTAACCTCTCTGGCTGGTTAACTGCTTCACCCAATCTTTTACAATCTTATCGAGCTCCCCTAGCACCTCCTCTCGCCTAGCCGACTCCTCCGGACTCTCATACAGACCGGCTTCAACCAAGAACTTCTCCAACTCCGCTGTCTTCTGCAGGTCAACCTCCGCCGGCTCAGCCAACGATATCGGTTTCGTAATTCCATACTGCTTCTGTGGCTGCTCGGCGACGGCAGCCGCTGCGGCGGCGTTACAGGCCGCCATGGAAGCCCCTCACAAGAGAGCACGAAAACCGATTCCGCAACAGAACCAACCTCACTGGAGGAACCCGAACCAGCGCGCGCAGATCGGCGATTCCGCAACAGAACCAATCTCACTGGAGGAACCCTAAGCAGGGCAGATTGGCGCCTGCAACCCCAATTAAAAAAAAAAAAGCAGTTCCCCCTCAAACTCCAAAAAAGGCACTCAAATCCTCTCCACGAAATCGACCGAGCACACGATCCCCTCTAACACTTCCAATATATAATAAATATGATAAAATCCCGAGAAGAACTACGACTCCGGGTAGGATCAGGAGAGGGATCCCTCGGTGCACACGGATCCGAATAACTCCCCCGTCGCCGAACCCCTCATGCCCGATTTCCCCCACACGGAAACCACCACCACCACCGACCGACCGGATCAGATCGAAACCGCCTCGCCCGGGCCGCCCGGATCCCCCCAGATCGGAGGCGCGGGTGGGGGGGCGGGAGCGGATCAGGCGATCCGCCCGCGCGCGGGGACGGCAGGCGGCGCCGCTCCCGGTGGCCCGCCGCGGCGGCGGCGGAGGCGGCG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0348700.1 | 6 | 21348829 | A | G |
| Osa06LNT0348700.1 | 6 | 21343734 | C | T |
| Osa06LNT0348700.1 | 6 | 21344569 | C | T |
| Osa06LNT0348700.1 | 6 | 21344596 | T | C |
| Osa06LNT0348700.1 | 6 | 21344609 | T | C |
| Osa06LNT0348700.1 | 6 | 21344819 | T | G |
| Osa06LNT0348700.1 | 6 | 21345443 | T | C |
| Osa06LNT0348700.1 | 6 | 21345460 | G | T |
| Osa06LNT0348700.1 | 6 | 21345467 | C | T |
| Osa06LNT0348700.1 | 6 | 21347095 | C | T |
| Osa06LNT0348700.1 | 6 | 21347558 | C | T |
| Osa06LNT0348700.1 | 6 | 21347587 | C | A |
| Osa06LNT0348700.1 | 6 | 21347639 | C | T |
| Osa06LNT0348700.1 | 6 | 21347958 | A | C |
| Osa06LNT0348700.1 | 6 | 21348908 | A | T |
| Osa06LNT0348700.1 | 6 | 21348911 | T | A |
| Osa06LNT0348700.1 | 6 | 21349123 | A | G |
| Osa06LNT0348700.1 | 6 | 21349535 | G | A |
| Osa06LNT0348700.1 | 6 | 21349798 | T | C |
| Osa06LNT0348700.1 | 6 | 21345085 | C | T |
| Osa06LNT0348700.1 | 6 | 21348162 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0348700.1 | osa-miR5143b | Cleavage | 5.0 | 8.954 | 1 | 24 |
| Osa06LNT0348700.1 | osa-miR5832 | Cleavage | 4.5 | 15.983 | 1 | 21 |
| Osa06LNT0348700.1 | osa-miR398a | Translation | 5.0 | 9.306 | 1 | 21 |
| Osa06LNT0348700.1 | osa-miR159a.2 | Cleavage | 4.5 | 13.467 | 1 | 21 |
| Osa06LNT0348700.1 | osa-miR168b | Cleavage | 4.0 | 23.267 | 1 | 21 |
| Osa06LNT0348700.1 | osa-miR395v | Translation | 3.5 | 14.11 | 1 | 21 |
| Osa06LNT0348700.1 | osa-miR1432-3p | Cleavage | 5.0 | 19.53 | 1 | 21 |
| Osa06LNT0348700.1 | osa-miR1857-5p | Cleavage | 4.0 | 5.241 | 1 | 21 |
| Osa06LNT0348700.1 | osa-miR5143a | Cleavage | 5.0 | 8.954 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0348700.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Osa06LNT0348700.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0348700.1 | 6 | gw6 | Morphological trait | Panicle/flower | RG424 | R2549 |
| Osa06LNT0348700.1 | 6 | RPLD4 | Physiological trait | Eating quality | RG424 | RG172 |
| Osa06LNT0348700.1 | 6 | nan | Physiological trait | Eating quality | RM253 | RM162 |
| Osa06LNT0348700.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0348700.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0348700.1 | 6 | tgw6.1 | Physiological trait | Source activity | RG264 | RM3 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)