© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0348900.1
AATTGGCAACAGCTCATCTTCCCTTATTTTCTCTTTAGCTTTGACAAATAATCTGTAACAATTTACAGCTGTTTAATGCTACGAACCAATGGAATGGAAACCCCGCCTCAACCTAAGCTTTTTTCCTCAATATCTACATCACAATAACAACAACCAACTCACTCGCCTCCAAAACTTAGGAAGATATATTAGTACAGCGACTGCCGGGTTAGCCTAAGTTCTCACATTTCACCTTTTTTTTTTTTCTCTTTCGATCCTAAACTTCAAGATTGGCCCGCGTCTTGATTGGCTTTAGCTTAACCCCCATGCTCTCGGGCGAGAGGAGTTCTGGCGATATACAAAACGGGTTCAAGGGGCTACGAGGGCTGCAGCTTATCTGGCTTGGTCTGTACAATCCGTATCCCATGAGGAAGTACTCCAGCGGCATAAGCATTGCATGCGGTTGCTCCTCTGTCACAACAGATCCACATCCTTGTACCTCTACGAGAGCACTATATCTCTCATCAAGCTTTGAGGTCATATGAACAGCCTCAGCATGGAACTGAGAGTTCTGGCCAACAAATATTAGAGTTCTGCACTGCAGCTCCTTTAAGCTTTCTGTTAAATCATGTCTCTCATTGATTGTGTGGATAAACCGCCACACATTCATGCTTTGCCGTTGATCTAGAAAACTTCTAGACGCCTGCACAATGTCTGATTCGGGTACAGCAGAGCATCCCTGCACTCCCTTGCTGAAGTATCGTTGTAGCAAACAGTCTTTTACCATGTTGCACATCCCATAATAATATAGCAAATTTGACATCACCTTATTATGAAACCATTCAGTCCAAGAAGGGGTCCTGCATAGAGGGGAAACTAGGATAAGACCTAGTACTCGCTCCCTATACTTCGTTGCAAATAGAGTAAGGATGTATGCGCCAGCAGTGACACCTAAGCACATAACAGGACCCAGTCCAAAAAAATCAAGTACATCTGAAACCTGATCCGCTAACTCATCAACAGATGCCACAGGACTGCTTGGTGAAACTGGAGCTGCTCCTAACTCATGTCCTGGGGGGCTGATATGGTAAATACAAAAATTATGCAGCAGTAATGAAGATGCTTCAGGGCAGAATAGTAGCCCTTGGAAGCATGACATATGATTCAATGCAATATCGGGATAAGTAACAAGTGCTGGCTTATCATGGTCGCCATACACCGCAACAGATACAGAACCATGGTTTGTTTGTATATGATGTTCCTGAAGAAAGCAAGGAAAGCGTCACACGAATTAGGATCAAAATGGTAAGAACAATACTAACCTTAGCCCTACGTCCAATAGTAGAAAATTCTCCATGTAGTACTTTGATCCAAAGAAAATCATGAAAACATAGGAGAAAATATAGCAGGAGACTACAACCAAGTGAAGCTCATGGTAGAAAATAGCAATGGCATCTATTTACATGCCCTACAGTGAATTATGGGATGCTTAGGAATTAAAAAAAAAAACGAGATTTGGAGGGAGAGACGTCCCTCCAAACATTTTTTAAGAAGAAATTGTGAGCGTGTTGGGGATTGAACATGGGACCTTGGGGTTGAAACCACACATCCCTTGCCACTGCACTATCAAGTGCGTCTCAGGACGCTTAGGAATTATGATGCAATTTGCATTCTAGTAGGTAATAGGACCATTTCGAACTAGCAGTGGCCCCCGGATGCTTGAAGGAAAAGTTTCTCTAAACTGAAAAAAGGATATGAATAGTGAGTATCTGTTTCCTGCATGTTGTTTCACTCATGCTAAATGTGGCCAAGGTCTGATGAGTGACAGAAGGATAATAATAACTCCATTATGATATGTGGTGCTAAAGTGATGATTCCAATACCACATCCCTTAGGCCTAAGAAAAAGGTGAAACAGAGCACTAGAAGTGATTCCTCCACCATTTCACAAGCAAATGGTAGAATAGAAGCATACTTTTGAGGAAAACCATGGCTAGGGCAATGCAATTTATCTGTTATTTTCTATCTGTCTATGGCAACAAGTGGCAGGGAAGCGTTAATATGATGATTACATCAAAAGCACCCTATTTAATAACCAATAATAACTAAAGAACTTCGCATGATAGGGACTTGAAGTTGCATTACCCATTTAACCATTTTTAACAGATGATACACAATAATATTTTAAAGTAACCATGATACTGAATGCGCTTGCTATCCATATCATTGGCAGTAGAATTATAGGTGCCCTTGACCTGTGTGTATGTGTATGTGTACGTGTGTTTCAGAAGAGTTTCAGTTGGTACTGAATAAGAGGTTGCTATCAGCATATTCAGTGTAAAGTTTAAAAATGCAATAGATTTAGGATTTTGTCCACAAATTTGTGACCCTAAAAATTCAACAATGGAAGTTTGAAACTTAGTGAACACTCACATGGCCTTTCACCCTAGATATACTTGCAGGACTAACCTAATTCTTTTCTACAACTACTTTCGATTTATGAATAAAGCAAAATTAAGGTGCCTTGGAAATTTGCGATTACGGATCAATAAGCAAAATTGGATAAACATCTGGACACAACAGGGACCTTAATTCCAACAACTAAAGGGCTTCCTATCAGCAGGGAGATAATTAATTGAAATTGGTGCTAGAAAGCCCAACCAATAAAAAAAAAGTGATACTACAAATTAAAGAAACACCAAAGAAAAAAGGGCAGTTGGGACACCCAAACAACAACCCAAAAGCATCAAAATCGAATACTTTATGGTTTGTTCCCCTCTCTTTTCTTTTTTCTTCTTGGTGATAAGCACACAAAGTAGGTGATTAATTAGCCTAACTGATTAGCACGCCAAGCAGTAAACTAACAGGGCCACGCAACCAAATCGAGAACCACAAAACTCGAAGAAAAGAAATTCGCCATGGACAAAGAAAGATAGGTAGAGGCCAGGTGGACACCTCCAAAGAGAAAAAAAAATTATCACTCTGATGTTATCAAGACGCAGACGGTGAACCAGTGGAAGATCAGTCATAATCACAGGAAAAGATGAGAAAAATCCACAAGCAACCGCCCCCTCAGATCACAGTCAGATACTACTCCCCCAAAGCAAGAAATCGACAAGAAAAAGAAAAACAAAATCAGGAAACGAACTCGAGCAACCTGAAATCCTACAAGAATTCGGGGTGGATTCGATCTAAACCCACAACACAATGCAACCAGCAGACAAGAACACAACTGCTAAAAAGATACTACTACTACAAACCTGAAGAAACGCCCCCCCTTCTCTCTGGAACCCCCAAACCCAGCCAAACACCAAAATCTCAGCAAAAAAATAAATTAAAAAAAAAAGCTCTTCCAAGAACCGAACTGAATCCCGCCACCAAGCTCCCATCATCCGGCGCTCCCCTCCATCCAATGCGTCCAACCAAATCGGGCCTCCAGGGGAGCAAATCAAGAAGGGGGAGGAGCACCACCAACCTTGCCGCCGAAGGAGATGCGCTCGACGTCCACCGACACGACGGAGCCGCCGGAGTCGCCCATCTCCGGCCAAGAAGACGGCGGCGGGGCCACTCCCTCCCACCTCTCCTCTCCTCCCTCGCTCTCCTCGCGCTCGCTCACCAACCGCCGCCTCAGCCGCCGCTGCTGCTGCCGCTGCTGCTCCGCCTCCACCAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0348900.1 | 6 | 21637569 | T | C |
| Osa06LNT0348900.1 | 6 | 21637708 | G | T |
| Osa06LNT0348900.1 | 6 | 21638135 | T | C |
| Osa06LNT0348900.1 | 6 | 21638851 | C | T |
| Osa06LNT0348900.1 | 6 | 21639737 | C | G |
| Osa06LNT0348900.1 | 6 | 21639886 | A | G |
| Osa06LNT0348900.1 | 6 | 21639894 | T | C |
| Osa06LNT0348900.1 | 6 | 21639934 | A | G |
| Osa06LNT0348900.1 | 6 | 21640381 | C | T |
| Osa06LNT0348900.1 | 6 | 21640487 | A | C |
| Osa06LNT0348900.1 | 6 | 21640554 | C | T |
| Osa06LNT0348900.1 | 6 | 21641316 | A | C |
| Osa06LNT0348900.1 | 6 | 21638244 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0348900.1 | osa-miR5794 | Cleavage | 4.0 | 16.363 | 1 | 21 |
| Osa06LNT0348900.1 | osa-miR1319b | Cleavage | 5.0 | 7.869 | 1 | 24 |
| Osa06LNT0348900.1 | osa-miR1440b | Cleavage | 4.0 | 12.563 | 1 | 21 |
| Osa06LNT0348900.1 | osa-miR395c | Cleavage | 4.5 | 22.647 | 1 | 21 |
| Osa06LNT0348900.1 | osa-miR395c | Translation | 4.5 | 18.271 | 1 | 21 |
| Osa06LNT0348900.1 | osa-miR159a.1 | Translation | 4.0 | 17.499 | 1 | 21 |
| Osa06LNT0348900.1 | osa-miR159b | Translation | 4.0 | 17.499 | 1 | 21 |
| Osa06LNT0348900.1 | osa-miR159c | Translation | 3.0 | 17.499 | 1 | 21 |
| Osa06LNT0348900.1 | osa-miR159d | Translation | 3.0 | 17.499 | 1 | 21 |
| Osa06LNT0348900.1 | osa-miR159e | Translation | 3.0 | 17.499 | 1 | 21 |
| Osa06LNT0348900.1 | osa-miR395o | Cleavage | 3.5 | 22.647 | 1 | 21 |
| Osa06LNT0348900.1 | osa-miR1429-3p | Cleavage | 5.0 | 9.059 | 1 | 21 |
| Osa06LNT0348900.1 | osa-miR1864 | Translation | 5.0 | 7.643 | 1 | 24 |
| Osa06LNT0348900.1 | osa-miR2099-5p | Translation | 5.0 | 15.911 | 1 | 22 |
| Osa06LNT0348900.1 | osa-miR2122 | Translation | 5.0 | 19.393 | 1 | 22 |
| Osa06LNT0348900.1 | osa-miR5338 | Translation | 5.0 | 12.955 | 1 | 21 |
| Osa06LNT0348900.1 | osa-miR5491 | Translation | 5.0 | 18.592 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0348900.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0348900.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0348900.1 | 6 | tgw6.1 | Physiological trait | Source activity | RG264 | RM3 |
| Osa06LNT0348900.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Osa06LNT0348900.1 | 6 | gw6 | Morphological trait | Panicle/flower | RG424 | R2549 |
| Osa06LNT0348900.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0348900.1 | 6 | RPLD4 | Physiological trait | Eating quality | RG424 | RG172 |
| Osa06LNT0348900.1 | 6 | nan | Physiological trait | Eating quality | RM253 | RM162 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)