© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0349400.1
ATACAACCATATTTGATAAAAGAAATATAGTCCATGATATATTATAATATGTTTTCTCCTATCCATAACAAAGCATGGAGATTTTGCTAATAGTAAATACATCTCAAAGATAACTATATATCATTATTCAACGAGCAACAGCTTCCAATGAATATAATGGTTCACATCCTTCCTCTGCGCGTGAGGTGGACATGAAGCGGGTGGAGCTTGTAGGCGGTGAGCTGCACGGTGTCCACCTTCTCCTCGTCACCCTCCCTCAGCCTCCACCCGAACTCCTGCACGAAGCGCGCGACGGCGGCGCACGCGATGTGAGTCGCCTGCAGGCTCCCCGCGCAGGCCCTCCTCCCGGCGCCGAACGCCATCGTCTTGTACATGTCCGCCACCTCGAGCCTCCCGCCGGCGAACCTCTCCGGCACCCACTCCTCCGGCGACTCCCACTCCTTCCTGTTCATGTTGCACCCGTACAGGTTGATCACCATCTCGGTGCCGGCGGGGACGTCGTAGCCAGCGAGCTTGGTGTCCTCGTGGACGAACCTCGGAGGTATGAGCGGGACAGGGGAGTGGCGGCGCAGCGTCTCGTGGAAGACGGCGTTGAGGTACGGCAGCCGTGGGAGGTGCTCCTCGGTGACCGTCTCGTCGCCGCACACCTCCCGGATCTCTTGGTAAAGCCGTTCCTGGCATGACAACAAGAAGAAGGCCAAAAATAAAAAGCTTTGGTTGATAATGCCAAGAATGCCAACAATGAGCTGGAACAGAGTAACAATATTTCTTGCCTGTTTGTCAGGGTTCTTGGCAAGCTCATACATGGCCCATTCTGTGGTGACCAAGGTAGTATCTGCAGCCTCTATGAGTGCCTCCCACACTAGCATCATCAGTTGCTCATCTGTCAGTGTGTTCTCTGCCAGCAAGAAGTCCAGATAGCATGTCTTTGCCTCTCCACGCACAATCCTTTCCTTCTGCTGCTTGATCAAGGCGCGCATCACCGCAGTTCGTCTAGTTTCTGTAGTAAACACTCTTGTTTCGAAGCTCTTGTTTGGAACCCAGCTGAGGTAGGGGAAGAAATCTCTCCAGTCGACCTCAATTGCGCACATCATCATGTCGGTCACAGTAGCATTGTAGATTTCTTCCTTCGAAATGTCCCTCCCAAATTCATCCACATAGACTGAACTCACATCCTCTCCTAAGCTCTGGATCATGGACAACCGGAATAGCTCATCCTTGAAAACATCTCTGAATATCAGAGGAGCATGTGGGTCATCTTTCACCAGTTTATGAAAAGTGCTTAACATGTTATGGATCATCATATCTCTTATGTCACGAAATTGTTTCTGTGCAGAAGTACCCAACATGCTTGACATGACATAACGCTTCACCATTTTGTGGAAATCACAATAGTCGCTGGTAGCAACCATGGATTTATCACGAGTAAGCACTGTCAGTGCTTTGGATAGCTTTCGGGTAGATATGGATGAGAATTTTGCAACCATCGCCTCCTTGGCTACTTCAGTTGAATTGAGCACAACTACAGAAGAAGCCCCGGTTCTTATAGTGTAGATTGGCCCGTAAATTTCAGCCCATTTTGCAAAGGTCTGATGAGGCTTCTTTTCTTTCAGTTGATGCAGATTTCCGATAATGGGTAAACCAGGAACAGCTGGGGGCGCGTTGGTGCGTTTCCGTGGCGCGATCACGCCGGCCCTCTCGGCGAGCGCGGCCGCGGCAACGAACCCTCCGACCGCCGCCACCGCCGGCGCCGCCGCCCCCGCGCCACCCGGCACGAACGCCTCCATGGATCACACGCTGCGTGCGCGCTCGCCGCCGTCGCCCACTTCACTCGATCGTGGAGTTGGGGAGGAGAAGCGACAACTCGCGTCGCGCGGTTGCACGTCCATCCATACGAGACTAGGCCATATAAAGAAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0349400.1 | 6 | 22074055 | A | G |
| Osa06LNT0349400.1 | 6 | 22074287 | C | A |
| Osa06LNT0349400.1 | 6 | 22074483 | T | G |
| Osa06LNT0349400.1 | 6 | 22074485 | C | T |
| Osa06LNT0349400.1 | 6 | 22074622 | T | C |
| Osa06LNT0349400.1 | 6 | 22074916 | A | G |
| Osa06LNT0349400.1 | 6 | 22076286 | C | A |
| Osa06LNT0349400.1 | 6 | 22076516 | G | A |
| Osa06LNT0349400.1 | 6 | 22076841 | A | T |
| Osa06LNT0349400.1 | 6 | 22077301 | T | G |
| Osa06LNT0349400.1 | 6 | 22077427 | A | G |
| Osa06LNT0349400.1 | 6 | 22077494 | A | G |
| Osa06LNT0349400.1 | 6 | 22078383 | A | G |
| Osa06LNT0349400.1 | 6 | 22078410 | G | A |
| Osa06LNT0349400.1 | 6 | 22078433 | C | T |
| Osa06LNT0349400.1 | 6 | 22078539 | C | A |
| Osa06LNT0349400.1 | 6 | 22078757 | G | A |
| Osa06LNT0349400.1 | 6 | 22076014 | A | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0349400.1 | osa-miR5834 | Translation | 4.5 | 17.551 | 1 | 21 |
| Osa06LNT0349400.1 | osa-miR164a | Cleavage | 5.0 | 15.091 | 1 | 21 |
| Osa06LNT0349400.1 | osa-miR164b | Cleavage | 5.0 | 15.091 | 1 | 21 |
| Osa06LNT0349400.1 | osa-miR164d | Cleavage | 5.0 | 15.091 | 1 | 21 |
| Osa06LNT0349400.1 | osa-miR408-3p | Translation | 3.5 | 21.134 | 1 | 21 |
| Osa06LNT0349400.1 | osa-miR164f | Cleavage | 5.0 | 15.091 | 1 | 21 |
| Osa06LNT0349400.1 | osa-miR417 | Translation | 5.0 | 20.969 | 1 | 21 |
| Osa06LNT0349400.1 | osa-miR2093-5p | Cleavage | 3.5 | 19.64 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0349400.1 | 6 | tgw6.1 | Physiological trait | Source activity | RG264 | RM3 |
| Osa06LNT0349400.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Osa06LNT0349400.1 | 6 | gw6 | Morphological trait | Panicle/flower | RG424 | R2549 |
| Osa06LNT0349400.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0349400.1 | 6 | nan | Physiological trait | Eating quality | RM253 | RM162 |
| Osa06LNT0349400.1 | 6 | RPLD4 | Physiological trait | Eating quality | RG424 | RG172 |
| Osa06LNT0349400.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0349400.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)