© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0349900.1
AGAGAGGTATACTTTGGCACCAACTGGCTGCACTTTATTGATACAAGACAATTGTCTACAATTGCACAGCCTGATCTGCATTATCCCTAGCAGTAACTAGCCTAACGCCAGTGGGGATTTATTCCCTGATCATAGTGTCTGAAATTATCTGAAACAACATCACAATCTCACGGTGCACAGTACACGTAAGGCAGTTCCGGACATTCGATGTAGGAGAACGGTTTTAACACGTCCCTGTGCCCAGTGTATTTAATCTTTACCCCCGGGAAGTGGATGCCCAGAACCCATACGCTCCTCTTTGCTAGGATCGATCACCGGAACAGCTGGAGAGGCTTCTTGAGACTTGGCGGCCGGAGCAGCTGGAAGATCACTGCCTGGAACGGGCACCGGCGTCGCAGACGGAGGATCACCGGATGAATAGGCCACCGGAATGGGGGAGGCGGCGGAGCTGTCAGCCATTCTCCCGATCTAGGTAGGCCGGTGGAAATATGATGGGATGTAGAAGGGAGTATCTATTTATGCTTCAAGCCTTCAAGCACCCGTCCAATGGATGTCGAAGAATCACGTGCGCTGATATTTTTCTTCAGGAAATAAGGTGTGCGTTTACACCTGTACACGGAATAATAGTCGTGGTTGAATTTTCTTGGCAAGATGGTTGTGGCGAACATAGGATAGGATAGGGGCGCACCTCCTAGCTGCCGCGCCGCTCCCTCTCGAGCGCGGCCGCCACATGGGCCTCGCCGTCGCCGGCGCATCCCCACACCGACCTACTACACCAGCCGCCATGTCCTCGCCGCCGCTCGCGCCAGCAGACCAAGCATTGGTCGCCGCAGAGAGCAGCACCGGCGGCGGCCGTGCGCCACTGCTGAATGCTGATGCCAGCCGCGGCGAGGGGATGGCCTGCTGCCGCCGTGTGGCTGCTACGTGCTCGCCGAGGCGCCGCCGTCGCCGGCTGCCGCTGGCCTGAGATGGCTGAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0349900.1 | 6 | 22957675 | G | A |
| Osa06LNT0349900.1 | 6 | 22958543 | T | C |
| Osa06LNT0349900.1 | 6 | 22958608 | C | T |
| Osa06LNT0349900.1 | 6 | 22958725 | G | A |
| Osa06LNT0349900.1 | 6 | 22958734 | A | C |
| Osa06LNT0349900.1 | 6 | 22958844 | C | G |
| Osa06LNT0349900.1 | 6 | 22958857 | T | C |
| Osa06LNT0349900.1 | 6 | 22960597 | A | G |
| Osa06LNT0349900.1 | 6 | 22961163 | C | G |
| Osa06LNT0349900.1 | 6 | 22961183 | C | A |
| Osa06LNT0349900.1 | 6 | 22962444 | T | C |
| Osa06LNT0349900.1 | 6 | 22961113 | C | T |
| Osa06LNT0349900.1 | 6 | 22961314 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0349900.1 | osa-miR162b | Cleavage | 5.0 | 21.309 | 1 | 21 |
| Osa06LNT0349900.1 | osa-miR167d-3p | Cleavage | 4.0 | 14.24 | 1 | 22 |
| Osa06LNT0349900.1 | osa-miR1849 | Cleavage | 4.0 | 23.842 | 1 | 21 |
| Osa06LNT0349900.1 | osa-miR2871a-3p | Translation | 4.5 | 14.825 | 1 | 21 |
| Osa06LNT0349900.1 | osa-miR2871b | Translation | 4.5 | 14.825 | 1 | 21 |
| Osa06LNT0349900.1 | osa-miR2924 | Cleavage | 4.0 | 24.886 | 1 | 21 |
| Osa06LNT0349900.1 | osa-miR812n-5p | Cleavage | 5.0 | 16.202 | 1 | 24 |
| Osa06LNT0349900.1 | osa-miR5511 | Cleavage | 5.0 | 24.409 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0349900.1 | 6 | nan | Physiological trait | Eating quality | RM253 | RM162 |
| Osa06LNT0349900.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0349900.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0349900.1 | 6 | tgw6.1 | Physiological trait | Source activity | RG264 | RM3 |
| Osa06LNT0349900.1 | 6 | gw6 | Morphological trait | Panicle/flower | RG424 | R2549 |
| Osa06LNT0349900.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0349900.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Osa06LNT0349900.1 | 6 | RPLD4 | Physiological trait | Eating quality | RG424 | RG172 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)