© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0350300.1
GCCAAAAAACCAAAGTAGCAGCCTAGCAGGCATATGCTCATGGCATCAAGTTCTTGCTACTACATGTCTACTGCTACACCATTTGCATACAACCAGCAACTACCTAAGCGGCTAGTAGTAACACTTGTATTTTTATCTGGGTGGTGCAGTTCGCATGATATATAATTACATGAACTGCATGGTAGACACAAAGGGAGAATAGGGGGCCAAAAACATCGGATGCTTGCTGACTCGCACAAAGGTAACGTAGCTACTGTAGGTTCCAAGGCATGGAGCCTTGGTTCCCAGTAGCGTAGCCTTGGCCACTACCGTCAGGCGTCGCGGAAGTGCAGTACTGCTGCACGACGTTGTTCGCCGGCAAGCCGGAATGCGCGGCGCCGGCGGCCAGCCACTGGGCGGTGGTCTGCCAGCCAGGCTGCAAATGAGTCAGCTGCTGCACGGGCACGGAATGCTGCTGTGAGTGGGACTGGACGTAGTAAGCCTGGGACAAGGTGTTCTGCGATTCCTGTGTTGCGTGATACTGCTGAATGGATTGGTAATGCTGCTGCTGTTGCTGATGCTGCTGATGATACGCGTGCATTTGCTGATGAACAGGTCCGGGTGGAGGCAACGGTGGCTGTGGAATAGCATGCCGTGTTTGCTGGAGATTCAGATTGCTTTGGTTTGGATCCCATTCTGGTATGTCATCATCGTCATCATCCTCCCAGGGTTGGGCTGCGGCAGCGGATCTGCTACCATACTTGCGAACCATCTCCCTCACATGGTCTACCGGGCGGCGGGACGCGGCCTGAGAATGCTGCTGCTGGCTCCTGTGTGCTTGTCGTGATGGTACTACGTTGGCAGCTGCGTTTGGGACGGTAACAAAATCGTATTCAGGTAGGTCATCGTCTTCCCTAACAACACCAGGGCCAAAGCCCGGAGGAACATCATCAGTTACAACATCCTGACCGTGGTGCTGACGCTCATTGGTAGGCTTGGAAGACAAGGGCACTGCACTGGCAATCACGGCATGCTGCTTCCTCGAGATGGATTGGTTTCTGGAGCCATCGTTCCTGGCGGGTATCCTAGGTGAAACATGGGGCCTCCGCCACACGACGACTCCAATAGCTGATGTTCCTGTCACGGTTAAGCTGCTCGACTGCTCCTTGGGTAGGTGCTCTGCAAGTATCTGTGCTGCCTTCCCTTGAGAAGGGCAGAGGTAAAGCTCCACTCCATCTGCAGGCTTCACTAGTCCTACTCTCTCGTCTGCAATATATGAGTCAATGGTCCGCAAGAGATGCTGGCGCCCACTCTCAAGAGAGCCCTCCTTCCAACGCAACTCAGTTACCATTATAGCACGGCTCCTGGATTTAGGAAGTTGTTCAAGAAATTCTTGAAAAGCACTGAGCCTGACTCTTCCCTTGATATCAAGGAAATGGCGCCACTCGTTTGTGGATGTCTTTTCACCGCTTTTGAAGATCGCAACAACATTTGTGAGTGATGACAAGGAAAGTTGAATTGTTCCCTCCCATACACTGTCATGTGTCAGCAAAGCATCAGGAGCTGATTTACAATCCGTGATAGATTCAGGGATCGACTGACTGCCAGTATCAATGTTTTCAGCATTGGCCTTTTCAGGGGAGGATTTGACTAACAGATCTTCCTTTATTTGTTCAACTGGAAACAAAATTGAGCCTGCGTCTTTTTTGGGTGACTGTAACTTGGACTCAAACTTATCTTGAGGAGATAATGTTTGCGGATCAAGTTGAGAATCTGATGCAGAAGCACTATCCACATTTTTGGAAGAATCTTCCGATTTCAATGAAATGTCAGTTTTCTCAATAGAATTAGGATCATCTTTCACAGTTTGAGTGGAATCATCTTCGAAAGGTGGTTCAGAATCAAGGGTCTCCATGAATTCGTCCAGTGACATAATTGGTGGAAGATTCTCTGTATCTTTCAGGTCATCTACCATCAGTTCCTGCATCAGATCAGTTTTCTCATTTTCTGTATGTTCTAAATTGCTTGGCATGTTATTGCCGCCTGTCACGATAACTCCATCTTGCTCACTATTGTCTGATTCTTTTTCTTCCGTGTGTACACTTTTATCATCGGTTTTGGTTTGACCTTCAGTAGGTCTTGATGGAACATGCGAAAGCAAATCACCCCCAATTCCAACCTCCACAGAGATACCGTCAGTTTCTTCCACCTCAACTTGAAATTCTCCTTTGTGTGTTTTCCTCACCAAGCGTCTAACATCCACTTCTTTACTAGGAAGAACCACCATCTTTGCAAGCTCTTCAGCCTTAGCCAACCGCCAGTCTGAAAGTTCCTTTGAAGCGAGTTCTTCAGTAGTCATTGAACATAGGCGTTTGGGTGTTATATCTCCAGACAAGACACGTCCCCTCAGTACAGGATTACTTTTATCTTTTAAGTTGAACAGAAGTGATCGACCCTTCTCCTTGTATTTCTTGTTAACTCCTCCCAATAAAGTGAACAGCTCACCTTCAATTTCAAATGCTAAAATTTGGGCCTTTTGGGTTACACTCTTCTTTTCTTCTGCTGCCCCATCATCAGTCTTTATTCTTTTAGACTCATGCTCAATCAGAGATACATCAACACCTTCATCAATATCAGATTTTCTGACTCTGTCTGGATCGGATTGAGAAATAGTTTCAGAAGCTCCAACAACGTCAGAAGACCAGCAAAGTCCATGGCCTTGCAGAAGCTCATCTAAAGTGCAAGAATTGTTATCCAGTACTTTATTTTCCAAAGGAACATGTATTGATTGCTGCTGCATATCATCACTCACCTTGATCGACATGTTTGATGCCGAATTGCTACTTAACATGTTATGTTGCCCGCTTTTCAAAGCACTAGTCTCTGTGACAGAATCAATACCAGCACCATCGGCTTGCTTGTTCTCGCTAGCAGATCCAACATGTGACACGGTTTCAACGGATTGCGGGGCACACTGTTGGTCAGAATCCATATTCAGGGCAGCAGCCAGAGTCTCTCTGAACTTTGATCTCACGGACTCAAATAATTGCGGCTGTGCCTTGGGCAGCAGTTCCTGCGCAGGACGCTTGCTACCAGCAGACCGAAAGGGCACAGACTTCAGCATCTGAACCTTCGGCGACGCTGCCATCTTCTTACCTGCTATCATAGACGGCGATGGCATCATCGCGGCCATACCAGGCAAAGCTGTCTGGACACTCAGCACCTGTTGCGGCGGCCTAAGCGACACCCTACTCAACGGCCTGGCCCCGGACCCGGAGAGGCCCAGCGCGTTGGGCCTGGGCACACCAACCTGCGCCGGCGGCTCGCTCATGGGCACGATCAGGTAGCTGCTGGCCGGCACCTGCGCGCCCCAGTTGCCATTGTAGAACACGGCCGGGTACCCAACCTGCGTAGTGTGGGTAATCGCCCCAGGCAATGTCGGCGGCGTCCCCGCCACCCGCGGCGGCTGCCCCTGCTTGGGGATCTCCATCACGGCGCCCTGCCCGTTCCCGCACCACGCCACCTCCGGTGAGGTCGAGGACGGCGGGGGAGGAGCTAGGTCCGGCGGGAAGGCGGCGGCGGGCGGGAGGAACACGGCGGAGAGAGGCGCGGAGGTGGGGGAGTGGAGGGGAGAGAAGGGTAGGGTTTGTGGGGGATTTATTTCCGCTTTTGTTGCGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0350300.1 | 6 | 23445244 | C | T |
| Osa06LNT0350300.1 | 6 | 23443279 | G | T |
| Osa06LNT0350300.1 | 6 | 23444066 | C | G |
| Osa06LNT0350300.1 | 6 | 23444125 | C | A |
| Osa06LNT0350300.1 | 6 | 23444646 | T | C |
| Osa06LNT0350300.1 | 6 | 23445084 | C | T |
| Osa06LNT0350300.1 | 6 | 23445305 | C | T |
| Osa06LNT0350300.1 | 6 | 23445875 | T | G |
| Osa06LNT0350300.1 | 6 | 23446742 | A | T |
| Osa06LNT0350300.1 | 6 | 23447140 | A | G |
| Osa06LNT0350300.1 | 6 | 23447359 | C | T |
| Osa06LNT0350300.1 | 6 | 23447530 | C | G |
| Osa06LNT0350300.1 | 6 | 23447741 | G | C |
| Osa06LNT0350300.1 | 6 | 23447817 | A | C |
| Osa06LNT0350300.1 | 6 | 23448708 | T | C |
| Osa06LNT0350300.1 | 6 | 23448943 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0350300.1 | osa-miR5834 | Translation | 5.0 | 17.48 | 1 | 21 |
| Osa06LNT0350300.1 | osa-miR1861o | Translation | 5.0 | 16.926 | 1 | 22 |
| Osa06LNT0350300.1 | osa-miR166a-3p | Cleavage | 4.5 | 20.449 | 1 | 21 |
| Osa06LNT0350300.1 | osa-miR166b-3p | Cleavage | 4.5 | 20.449 | 1 | 21 |
| Osa06LNT0350300.1 | osa-miR166c-3p | Cleavage | 4.5 | 20.449 | 1 | 21 |
| Osa06LNT0350300.1 | osa-miR166d-3p | Cleavage | 4.5 | 20.449 | 1 | 21 |
| Osa06LNT0350300.1 | osa-miR166f | Cleavage | 4.5 | 20.449 | 1 | 21 |
| Osa06LNT0350300.1 | osa-miR166k-3p | Cleavage | 5.0 | 20.449 | 1 | 21 |
| Osa06LNT0350300.1 | osa-miR166l-3p | Cleavage | 5.0 | 20.449 | 1 | 21 |
| Osa06LNT0350300.1 | osa-miR169i-5p.2 | Cleavage | 5.0 | 10.26 | 1 | 22 |
| Osa06LNT0350300.1 | osa-miR166g-3p | Cleavage | 4.5 | 20.449 | 1 | 21 |
| Osa06LNT0350300.1 | osa-miR166h-3p | Cleavage | 4.5 | 20.449 | 1 | 21 |
| Osa06LNT0350300.1 | osa-miR166m | Cleavage | 4.5 | 20.449 | 1 | 21 |
| Osa06LNT0350300.1 | osa-miR166j-3p | Cleavage | 4.5 | 20.449 | 1 | 21 |
| Osa06LNT0350300.1 | osa-miR1425-3p | Cleavage | 4.0 | 19.195 | 1 | 21 |
| Osa06LNT0350300.1 | osa-miR1432-5p | Translation | 5.0 | 15.123 | 1 | 21 |
| Osa06LNT0350300.1 | osa-miR444b.1 | Translation | 5.0 | 20.699 | 1 | 21 |
| Osa06LNT0350300.1 | osa-miR444c.1 | Translation | 5.0 | 20.699 | 1 | 21 |
| Osa06LNT0350300.1 | osa-miR1861a | Translation | 5.0 | 16.926 | 1 | 22 |
| Osa06LNT0350300.1 | osa-miR1861b | Translation | 5.0 | 16.926 | 1 | 22 |
| Osa06LNT0350300.1 | osa-miR1861d | Translation | 4.5 | 16.926 | 1 | 22 |
| Osa06LNT0350300.1 | osa-miR1861f | Translation | 5.0 | 16.926 | 1 | 22 |
| Osa06LNT0350300.1 | osa-miR1861i | Translation | 5.0 | 16.926 | 1 | 22 |
| Osa06LNT0350300.1 | osa-miR1861l | Translation | 5.0 | 16.926 | 1 | 22 |
| Osa06LNT0350300.1 | osa-miR812g | Cleavage | 5.0 | 12.876 | 1 | 24 |
| Osa06LNT0350300.1 | osa-miR812h | Cleavage | 5.0 | 12.876 | 1 | 24 |
| Osa06LNT0350300.1 | osa-miR812i | Cleavage | 5.0 | 12.876 | 1 | 24 |
| Osa06LNT0350300.1 | osa-miR812j | Cleavage | 5.0 | 12.876 | 1 | 24 |
| Osa06LNT0350300.1 | osa-miR827 | Translation | 4.0 | 15.984 | 1 | 21 |
| Osa06LNT0350300.1 | osa-miR2928 | Cleavage | 4.5 | 18.166 | 1 | 20 |
| Osa06LNT0350300.1 | osa-miR5508 | Cleavage | 4.5 | 12.033 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0350300.1 | 6 | gw6 | Morphological trait | Panicle/flower | RG424 | R2549 |
| Osa06LNT0350300.1 | 6 | RPLD4 | Physiological trait | Eating quality | RG424 | RG172 |
| Osa06LNT0350300.1 | 6 | nan | Physiological trait | Eating quality | RM253 | RM162 |
| Osa06LNT0350300.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0350300.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0350300.1 | 6 | tgw6.1 | Physiological trait | Source activity | RG264 | RM3 |
| Osa06LNT0350300.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0350300.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)