© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0351400.1
CCCTGGTATCAGATAAGATTAGCATACATATATAGAGATATTGGATAGTGCATTGCAAGTTTACAGGTGATTATGTCTGACTATTTCAACTGGTATACCGTGACCAAGTTCTTTCCTCAGTTTGCATCATGGACAACTGCAGGAATGTGCTATTGTAAATCTGTAACACCTATAGCCCAGGAAAACAACAGGGGTGGCCATGCCAACACAGCGACACAGAAAAGAATCGTCAGAAGCAAACCACCAAAGGTGTTGTAGGTAAGCTATGGCAGCTGATCATCTTCAACGACCACCTGTTCATTCTTTGTGTTCGCCATTGACAGAACCGTTCTGCTCGCCGAGCTTATGGAACTCGGCTTCGATGACCTCGACGATCTTGGCATCCTCAGGATCTTGGTCAGGGATATTCACATGCAGGGAGCCCTGCTTGATGAGCTCCTGGTTCAATGCCTGCTCGTCAATGTAGTGGTAGAGCTCTTGGTGGAAAGGATGATCGAGAGAGAAGCAATTGTTGACGTCGTTCGACGAATTTTTAGATGATCCTGAGCCTTCCCGCTGACAGAAATGGGGAAGGGAGGAGTGGTCCATAATCTTTAGAAGCTCATCTCTCCCACAACCATGCAAAACGTGAACCTTCTTCCGTGTCCTCTCTTGCAAGAGAGGCTTCACAACCTTCCAACATGCCGAGAATATATATGGAGCATTAACTATATAATAGGTCTCTGCCTTTTCAGGGTAATTCAGATCGTCAACAGTAGATATTGCAGTCAAAATCTTCATTTGGTTGAGTGCTGACAATTTCAATCCAGTCATATCTAGAACCTTTATACAGGTGCTAATAGGCCGCCCAAACTTCTTTGATGCCATAGGCAAAACAATACGGTCACGGTACTCATTGATTTGAATATGAGATTGCACATAGTAATGAACCGAAGCTTTGTCATATGTACTCTGTCCAACACCAATGGCAAATACTGGGATGCCCTCCTTTGAGTATCCTGATAATCCAACAAGCTGTGTCTCACGTATTGATCTATATAAATCTACAGGAATTATAGGTTTCTCCAGTATACTATCAATTTCATTTTGTATCCTCCAATTCAAGGAATCCACAAGCATATCACAAGCCTTTGAAACATGCCACTCTCTAGCTTTTAGGAAGCGCACTAGTGTGTCTGTTGGATAGCCCTGGTGCACATTCTGGAACGTCTGCTTCAGCGGCTCCTCGACTTGGTCCAGGAGGCGAGTGAGCTCCTCGACGGCGGCGTCGCAGGCGGCGGCCCCCATTGCCGGCGGCGCGCGATCCGTGGCGAGTCGCACCGGGGGGAGGATTTGGCGGGCTCGGCGTGGATTTTGGGAGAGGAGAGGGGAGAGGGAGAGAGTGAGATTGTCTCCTCCGACTCCTGAGTC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0351400.1 | 6 | 24142609 | T | G |
| Osa06LNT0351400.1 | 6 | 24144153 | A | C |
| Osa06LNT0351400.1 | 6 | 24144288 | T | C |
| Osa06LNT0351400.1 | 6 | 24144623 | A | G |
| Osa06LNT0351400.1 | 6 | 24144885 | A | C |
| Osa06LNT0351400.1 | 6 | 24144938 | C | T |
| Osa06LNT0351400.1 | 6 | 24145000 | A | G |
| Osa06LNT0351400.1 | 6 | 24145318 | T | C |
| Osa06LNT0351400.1 | 6 | 24146754 | T | G |
| Osa06LNT0351400.1 | 6 | 24147088 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0351400.1 | osa-miR5795 | Cleavage | 4.0 | 23.274 | 1 | 22 |
| Osa06LNT0351400.1 | osa-miR156b-3p | Cleavage | 4.5 | 21.164 | 1 | 21 |
| Osa06LNT0351400.1 | osa-miR398a | Translation | 5.0 | 16.006 | 1 | 21 |
| Osa06LNT0351400.1 | osa-miR5077 | Cleavage | 4.5 | 24.563 | 1 | 19 |
| Osa06LNT0351400.1 | osa-miR5160 | Cleavage | 5.0 | 10.688 | 1 | 22 |
| Osa06LNT0351400.1 | osa-miR5160 | Translation | 5.0 | 16.383 | 1 | 22 |
| Osa06LNT0351400.1 | osa-miR2275c | Cleavage | 4.0 | 8.424 | 1 | 23 |
| Osa06LNT0351400.1 | osa-miR5518 | Translation | 4.5 | 16.633 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0351400.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Osa06LNT0351400.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0351400.1 | 6 | prt6.1 | Resistance or Tolerance | Drought tolerance | R2549 | RG716 |
| Osa06LNT0351400.1 | 6 | gw6 | Morphological trait | Panicle/flower | RG424 | R2549 |
| Osa06LNT0351400.1 | 6 | RPLD4 | Physiological trait | Eating quality | RG424 | RG172 |
| Osa06LNT0351400.1 | 6 | nan | Physiological trait | Eating quality | RM253 | RM162 |
| Osa06LNT0351400.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0351400.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0351400.1 | 6 | tgw6.1 | Physiological trait | Source activity | RG264 | RM3 |
| Osa06LNT0351400.1 | 6 | nan | Morphological trait | Root | RM4447 | RM5509 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)