© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0352300.1
GGATCGCCTTTCCCTTTCTTTCTGGATCACGAGCACACATGCACGCATTGATTGAATCATCACGGCCATGGTGAAGATTGTTAATTAGGTAATCAGGTCTTAGGTACTAACTATGTTTAATTTCATATCCATTACAGGTAGTGTAAGCCATGGACAAGCTTGGTGATCTGTCATTCTGTCCATGGCAAGGCTGGGCTCGCTGTCACATGGCGGTGGATCACTTGGTGAGGACGTTGAAGTAGACGGTGTAGAACTCGTCCTGGAGGCTCTGCAATGGCTCCAGGAGGAAGTTCCTGTCGGTGCCCGTCGCCGAGAAGCTCAGCGGGTGGTAGAGACGGAGAGGTGCCGCCTGGGTGAAGCTTGCGGCGCGGCGGAACGCCGTGTCGTCGTCGTCTTCGCCGCCGCCGGCGGCGGTGGGTTTCCGGCAGCTGACCTGAGCCTTGGCGCCGGCGAGGTAGGCCGTGGTGGGGGCTGCCACGAAGCATCCCGGCCTGGTGGCGAGCTCCAGGGACACCGTGCCGGGGAGGCCGTCCAGCCCGGCGACGGCGTTGAACCGCGTGGCCGGCCCCGGCCGGCCGACGCTGAGCGCGTCGGTGACGGCCATGCCCGGCCGGTCGAACGGCTCGAGCGCCACGTCGCGGCCCTGAAGCCTGCCGGTGGCGGCGTCGATGGCGCTGGCGCCGGAGGGGGAGTGGTAGGCCCGGAAAGTGGCGTGCACGCACGCGTCGCTCCCGGCGACGGGGGACTCCTGCATCGTTAGCGCGCCGTCGGCGATCGACACCGACAGGACGAACGCCGCCGCCGCCTGCGCGTCGCCGTCGCGCTGCGTGAGGGTGACGAGCTGCGAATTGAGCGACTGCGACACCGGGGTGACCCAGACGGCGACGGCGGCGGCGGCGTGGGTGGCGTTCACCTCCCAGACGCCGGGGGTGAGGCCGCTGTTGGAGTCGTTGCTGGTTTTCACGGTCTGGTTGCCGTGCGTCAGGCCGGCGAGGAGGTGAGGCCCGAACAGCACCGCTTGGATGGACGAATACTCCGGCCGATCATCTTTGATCGGCTCGGTTCTTAAGGTGATGGGGAATTTGAGAGATAAGGTGTCATCGCCCCAAAGTTTCGTCACCGAGAGGAAATCGCCTGCAGATGTCAAGTTGAGTTTTTGGCCATTTAGAGTTGCTATTGCTCCATCCACGGATGTCCATGACGGTATCCTCACATTCACATTTGCCGGTCGGGCATCTCCCTTTGAAGAAATGAAGATTGAAACCTCAAAGTGAGAATCTGTTGAGGACAGTGGTTTGGCCTGCTGCTTAACAGTCAGGCCTGCCGCTTTCCAATCAAAGGTGCTTGGTATGTACTGAATGATGTAAAGCCCAGGGATTTCTCCCTCTTCCAAGAAGTAGATGGAATCCCCTAACTTTGAGAATGACTCTATCCCTGTCCCATAGCAGCACCAAAATGTAGCATTTGCATTACCCCAGCCCCCTGGGTTCTTGGGGGGTAGGCCAGAGGTGGGCATGCCACTGATGCTCTTGGATCGTCCCGGGCCCATGGGAAGAAAATAGATCATCACACCAGGCTCTTTTCCCCTCTGGTTGCCCATGATCCCATTGATAAGTAGCCTCTCGTAGTGATCGGTGTATTTACCTTCCTTCGTCCATCTGAACAGGTTTCGTGAGACCTTAAGCAGGTTGTATGTGGCGCAAGTCTCCTCATTTGAGCTGATTTTGATCTCATCTACTAGCCGCTTCGGATCGTGCCAGTGTTCCATGGTAGATGTGCCTCCTGTTGCAAATGTATGAGAGGAGTTTACAACATCAAAGAAGAATGTTGCAATTTCCTTGTAAAGTTGATCCCCAACTACTTCATATCTCTTTTGTGCACCAACAATAACAGGAACATGTGTGTTAACATGCAATCCCGATATGTCGTCATCATGCAGCCCAAGTGGTCCAAGGAAGCACGGTTTGTCGAAAAGATGTGCCATCGTCAAATGCTTCTGGTTTTTCGTTATGGCATAAAGCTGATACATAACATCATTGAATCCACCGGTTTCCTCGTTTATCGCTTCCCAGTGCCTCTGAATGCTGTACTCCTGTATCAACTTCTTCACACGAGTACTGAAGTAATCAGTCATCCACACCACAATCTCAAGACCTTTCGGGTTTCCAGCCAATGTATACTGATCAAGAAGGCCTTGCATGATCTTGTGGATGGTGTAATAGGGCGACCATGCCTCGGCCAGCTCATCATACGCGTCGAACATGGATTCAGGGTAGGCTGAGAGGTAACCCGTGTTCATCTTCTTCTGGCAAGAGTAGAGGATGTCCACCACTTTGGTCATCTTCTCCCTCAGCGCGTCGTTGTGCGTGCTCGCCCACATGTGCGCCGCCGCGCTCAAGTAGTGACCTGTGAAATGGCCGCGGAGCTGGCCGTCCGGCGCCTCCCAGCCGCCGTAGGGCTCGCCGACGGTGGGGAGCTTGGCCTGCTGCCGGAACGTCCATG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0352300.1 | 6 | 24504348 | G | C |
| Osa06LNT0352300.1 | 6 | 24502888 | G | C |
| Osa06LNT0352300.1 | 6 | 24503130 | C | A |
| Osa06LNT0352300.1 | 6 | 24503162 | T | C |
| Osa06LNT0352300.1 | 6 | 24503199 | T | C |
| Osa06LNT0352300.1 | 6 | 24503238 | A | C |
| Osa06LNT0352300.1 | 6 | 24503362 | C | A |
| Osa06LNT0352300.1 | 6 | 24503364 | A | G |
| Osa06LNT0352300.1 | 6 | 24503457 | C | G |
| Osa06LNT0352300.1 | 6 | 24503681 | G | T |
| Osa06LNT0352300.1 | 6 | 24503845 | A | G |
| Osa06LNT0352300.1 | 6 | 24504960 | A | G |
| Osa06LNT0352300.1 | 6 | 24505884 | C | A |
| Osa06LNT0352300.1 | 6 | 24506070 | A | G |
| Osa06LNT0352300.1 | 6 | 24504655 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0352300.1 | osa-miR5821 | Cleavage | 5.0 | 18.071 | 1 | 21 |
| Osa06LNT0352300.1 | osa-miR5821 | Translation | 5.0 | 17.339 | 1 | 21 |
| Osa06LNT0352300.1 | osa-miR5829 | Translation | 4.5 | 17.662 | 1 | 24 |
| Osa06LNT0352300.1 | osa-miR395t | Translation | 5.0 | 17.134 | 1 | 21 |
| Osa06LNT0352300.1 | osa-miR171c-5p | Cleavage | 4.5 | 19.534 | 1 | 21 |
| Osa06LNT0352300.1 | osa-miR171c-5p | Cleavage | 5.0 | 12.225 | 1 | 21 |
| Osa06LNT0352300.1 | osa-miR2105 | Translation | 4.0 | 17.971 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0352300.1 | 6 | prt6.1 | Resistance or Tolerance | Drought tolerance | R2549 | RG716 |
| Osa06LNT0352300.1 | 6 | gw6 | Morphological trait | Panicle/flower | RG424 | R2549 |
| Osa06LNT0352300.1 | 6 | qGL-6 | Morphological trait | Seed | R674 | R2549 |
| Osa06LNT0352300.1 | 6 | RPLD4 | Physiological trait | Eating quality | RG424 | RG172 |
| Osa06LNT0352300.1 | 6 | nan | Physiological trait | Eating quality | RM253 | RM162 |
| Osa06LNT0352300.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0352300.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0352300.1 | 6 | qDLR6-2 | Resistance or Tolerance | Other soil stress tolerance | RM1340 | RM5957 |
| Osa06LNT0352300.1 | 6 | tgw6.1 | Physiological trait | Source activity | RG264 | RM3 |
| Osa06LNT0352300.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0352300.1 | 6 | nan | Morphological trait | Root | RM4447 | RM5509 |
| Osa06LNT0352300.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)