© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0352500.1
CACCAAATAAATGCTGCTCATATAACCTTGACATTAAACCATCGTAGTCAGGCATACACCAAGAATACATCAGCAAGAAAAGAATCCACAGTATCTCTCGCTCATCTCTACAAAAAAAGATAGCAGCAGTAAAACCTCCATATCCATCACCTCCAGCTCCAAGAGTCTCCAACAACAGCAACAACAGTATCTCTCTATATCTTGCATTCCATATGTACATCGTCTCAGAATCCGGCCTCCAAAATCAATGAAAGTCCCATGCACCGCACTGCTGCACTGCACAAGACGTTGCCAACCATCCACAGCAGCAGCAGCAGCAGCAGCAGCCGTCAGTCCACAGCTCACGCCTAGCTAGCTAGCTAGCTCTCCTGACATCCAGCCGCCATTGTCCACAGCTCACGTATGTTTGTTTGGCTTGCTCTGCTGACCTGCTTGCTATCACTACCACCACCGTTGGTCACAGGCTCACAGCTCCGTCTTTAGCTTGTTGCCTGTCTGGGCCGGCGCTCCAGAGCTTGCTAGATCATAGCCGAAGAGGGAGGAACTTGAATTGCTAAAGACAGGGGGATTGGTATCCGTCCGCTTTTCCCACTGTGAAGGCGGCTGGAGCGGGTGTGCTAAATCACCATGCCAGAACTGCTGTTGTAGTTGCATGAGATTCCTTGCTCCATGGACGCCCATGTCTGGCCAGGTGACCTGCTCCAAATCCATTCCATTCTTGTAGTTCAAGCCTGTTATCCTTCCACACTCCGTAGTCAAGAAGTTGTCTAGCCCACCAAAGTCGACCCTCGGATTTACAGCTGCGAGCCTCATTGACAAGTACTCAACTTGCCTTTGAAGAGATTGGACATGATTGATGATCTCATCCAGTACCAGTGCTGTTCCTGATACCTTACTGCATCCGGGGACCAGCTCCTTGAGAAGCTCCATCCTCGCATTGATCTTCTCGCGTCTCGCCCGCTCGGCGAGGCTGTGGCTGTCGGTGGCTTGCCCTCTTCTCGCCCTCACGTGCACGTACGCCGGCTTCTCGTCCTCGCCGCCGTCGCCACCGTCCTCGCCGCTCGCCGCCGTCTTCCCCTTCTTCGCAGCCGCCTTCCCCTTGGAGGCGGGGTCGGGCTTGCGCTTGGAGGAGGAGGAAGGGGGAGGGGGAGGAGGAGGCGGCGGGGAGGGCGGCGAAGGGGAGGCGAACGCGGAGAACCGGGCTGCGCGGTCGACGAGGTGCGGGTCGGCGGGGAACGCGGGCGGGGGCGGCGGCGCGGAGGCGGCGGCGGTGGGGAGAAGGAGCTCCATCGCCTGGGAGGTCGGGAGCCCCAGCAGCGCGGTGAAGGAGCCCCCGCTGCCTCCACCGTTGGAGGAAGAGCGCGCGGCGGAGGCGAGCGGCGGGTGGATCTCGCCCACGGCGGAGGAGAGGTCCGGCGGCGGCGGCGGGGAATGGTGGCGCATTGGCGCGGAGGCGAGAGACGGCGGCGGCGAAGTTGGGGACGAGGAGGAGGCCGGAGGCGAGGGGGGTGGGGGAGAATAGTGGAGGTATTTATAGAGGTCGGCGTCGCGATGTGCTTTGCTTTCTCTTTGCCTTTCGCTTCGCTCTCGGCCTCTC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0352500.1 | 6 | 24522759 | C | G |
| Osa06LNT0352500.1 | 6 | 24523799 | A | C |
| Osa06LNT0352500.1 | 6 | 24523976 | C | T |
| Osa06LNT0352500.1 | 6 | 24524150 | A | G |
| Osa06LNT0352500.1 | 6 | 24524584 | A | G |
| Osa06LNT0352500.1 | 6 | 24524830 | T | C |
| Osa06LNT0352500.1 | 6 | 24526270 | T | A |
| Osa06LNT0352500.1 | 6 | 24526287 | T | C |
| Osa06LNT0352500.1 | 6 | 24526395 | G | T |
| Osa06LNT0352500.1 | 6 | 24527103 | G | A |
| Osa06LNT0352500.1 | 6 | 24527754 | C | A |
| Osa06LNT0352500.1 | 6 | 24527886 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0352500.1 | osa-miR5807 | Translation | 5.0 | 16.81 | 1 | 24 |
| Osa06LNT0352500.1 | osa-miR5822 | Translation | 5.0 | 15.993 | 1 | 21 |
| Osa06LNT0352500.1 | osa-miR319a-3p | Translation | 4.0 | 16.336 | 1 | 21 |
| Osa06LNT0352500.1 | osa-miR319a-3p.2-3p | Translation | 4.0 | 23.488 | 1 | 20 |
| Osa06LNT0352500.1 | osa-miR319b | Translation | 4.0 | 23.488 | 1 | 20 |
| Osa06LNT0352500.1 | osa-miR171h | Cleavage | 5.0 | 20.765 | 1 | 21 |
| Osa06LNT0352500.1 | osa-miR1872 | Cleavage | 4.0 | 19.233 | 1 | 24 |
| Osa06LNT0352500.1 | osa-miR2118b | Cleavage | 5.0 | 21.792 | 1 | 22 |
| Osa06LNT0352500.1 | osa-miR2118c | Cleavage | 4.0 | 21.792 | 1 | 22 |
| Osa06LNT0352500.1 | osa-miR2118n | Cleavage | 5.0 | 21.792 | 1 | 22 |
| Osa06LNT0352500.1 | osa-miR2118q | Cleavage | 4.0 | 21.792 | 1 | 22 |
| Osa06LNT0352500.1 | osa-miR5075 | Cleavage | 2.5 | 24.017 | 1 | 21 |
| Osa06LNT0352500.1 | osa-miR5075 | Cleavage | 3.5 | 16.7 | 1 | 21 |
| Osa06LNT0352500.1 | osa-miR5522 | Cleavage | 5.0 | 15.901 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0352500.1 | 6 | nan | Morphological trait | Root | RM4447 | RM5509 |
| Osa06LNT0352500.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Osa06LNT0352500.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0352500.1 | 6 | prt6.1 | Resistance or Tolerance | Drought tolerance | R2549 | RG716 |
| Osa06LNT0352500.1 | 6 | gw6 | Morphological trait | Panicle/flower | RG424 | R2549 |
| Osa06LNT0352500.1 | 6 | qGL-6 | Morphological trait | Seed | R674 | R2549 |
| Osa06LNT0352500.1 | 6 | RPLD4 | Physiological trait | Eating quality | RG424 | RG172 |
| Osa06LNT0352500.1 | 6 | nan | Physiological trait | Eating quality | RM253 | RM162 |
| Osa06LNT0352500.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0352500.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0352500.1 | 6 | qDLR6-2 | Resistance or Tolerance | Other soil stress tolerance | RM1340 | RM5957 |
| Osa06LNT0352500.1 | 6 | tgw6.1 | Physiological trait | Source activity | RG264 | RM3 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)