© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0353000.1
GGCATAGTATTCTTGAATCAATTCGCGAGGCCTGGAGTGAATGAATCATTGGGTGAACATGCAAATGGCACTGGGTTTCACACTCACCACAGGCACAGTGACGAAAAACTACGAAGAGAGTAGCAGTAAAGCACACGCTAGTGCAGTGAAGAAGTTTTCTAGTCATACTGGTGATGATCATCACACAACAATCATGCTATCGAAACTGTCGCGCCTAGCTTGCTGACAGGCTACTGTACACATTTCAGCACCTAAAAGCTAAAGCCTATATATAGAACTTCCATGAGCGAGGATGCACACTACTTACAGACGAGGTCGCAGTTTTTTTTTCATATATAAACAAGCCGCTACGATTGATGAGTTGAGTTTTGCTTAAGCAAGCAGAGACAAATCGGGAACCAACTACACCACGGGAAGAGCTGCTTTGGCAAGAGAAGCATCACGCATCGGCATCTAAACAAAGGAATCTATTGCTAGCTGGCAATTTTCGTTCTTCATGACTGCTTACAACTTCTAGCAGGGCCCCTACGTATCCTCTTCAAAACAGGGCGAGGGGTACCAGGCTGAGTTTGTGAGGAGTCGCCTTCAGCATCATCATGCTTATCTTCGCTGTTGTTTTTGTCCATCGACCGGGTCCCATTGGATGATTTCCTTTTCTTGTTGACAACCGTTGAGATTAGTTTGACGTCCTTCACATCTTCATCTTGAGTAAATTTTTGAGACTGGCTGTCATCGGACCTAGTTTCTCTTGCATTTACCTTAGCCACCTCTTCCTGCTGGGTAATCCTATCACGCTTATCATGTTCAGATCGTTTCTCACCTATCACAATGACACCACGTGCCATTTGTTGCTCTGCAACCTCACATTTCCCATTGAATGGTGGCATGTAGCAAAACCATTCATCTGGCAGAGACTTTGTATCGAAGCCTGCATTCAATATTCTCCATTTACGACAGCTGTAGCACTGAACCCACTCATGATCAGCCTTATAGCGCTCACTCCCTTTTCTCAATTCGAGAGTGTCAAAATTTGTATCCCAGTATTCATCCGCTTTCCTACCAAGCCACTCCTCCAGTTTAGCATACATTTCACAATCTTGGAACCCTTGTTTACTGTTAAGAACCCATGAATTACCATCTTCATCATCAATAAGGTCTGTGATATCTGCAACTCCAATTACTCCACGTCCCATGTCAGCATTATGCTTTTGACCTCCAACTCGTTTGTAAGACTCTATTAGACGGCCATGCCAATACAAGAAAATTCCACAGTTCATTCTGTCCCATTCTACATTGCTCCTTCCAAGGGTCAATTGAATAGTCCTACCCATTATTTCACCAGATATAACAGATGTCTTGTTAAGGGTCTTTGCTAAAGGGCGAGTTTTGACCGAAGACCCTTGGACAGAGATCTTCATCCGAGGATTCAGGAACATAACTTCCAAATAGGACTGAAGAGAATAGTCCAATGGTACATTGTTACTTGTTTGTCCTGGGCGCAATCTGACTCTTCTTGAACGGATTAGTATGTCTCCACGACCATGGTGGACAGGATCTTCAGATGGCTTCCCTGAACTCCAGTCCAAGGTGTAATCTGCACCCCATCTATCTAAATTCCATATATAAATCTGTGTTCCAGTACCGTCTTCACCAAATATCCCTAGCTTTTCTCCAATGAAATACTCATTGAAGGGAGAAAATTCCTTAATAGCATTCAGGTTATATTCAGCAGTAGCTTCAGATTGGACACTTGAATCAACTTCCATGTATTGCCCTTCTTTACGATATGTCACCACAGGTATCTCAAGATTATCTTTATTTTCATTAAAAGACTGAGATAGGAAGGCCACTGATCTGGAAGATGAAGTTTGGGTTAGCACAATTGCATCTCTGCCAAGTTTCATAGCACCAGTCTTAAATCCAATTCCAAACCTCCCAATTTGATCCTGGCGTTGCTTATCCGGTCTTTTGTGACCGAATGAGATCATTCTCATCATTTCAGCACAAGTCATTCCATGCCCATCATCAATTACAGACAAGACAGGGATTTTTTTGTCTGCTTTCTTCGAAAACAATGATTTGACTGAAATATTCAACCTTGATGCATCTGCATCTCTAGAGTTGTCAATGAGCTCTGCTATTGCTCCAAAGACCCAGCCAGCATGTGTCTGACTGAGTGTTCGCAGATAACTAGGATCCGTGCTGACAAAATTTTTTGCAAGAGTGGTGGTTCTCTTTTTCACTATTGGATCTAAAATTCTAGGGCCATCTTCAACAGACTCACATGGTGATGATTCTGGAACTGATTTGTGCAGCTCTGTGACACGCGAGGCATTCATCTCCTTAGGATTTGGGCCACTATCACAAATCTCCTCTCTCAAATATGACTTTGGATTCATCGAGCCAGATTGGAAATCACTTCTGTATGACCTTTTTAAAGCATCAGATACTCCAGCCATCGGTTTGCAGTCTCCAGGATCTTTTTGCTCATACATGACCACCGCATGTGAGAAGTTAGGGCGTTCATGAGATTCATGAGATTGAGGAGGGAAAATATGTAAGGCAAAGGAGCTGAATCTAACTACAGCAACCTTCAAAAAAGCACCGAAAAAGAACAAGGACCCCACATTACAGGCAAGAAAAGAACAGAGAACATTGCTAATGATGTTAATAATAAAATACAAAATGGCAAGTAGAGAACAGAACAATGCTAATAGTGCTAATAATAAAATACAACATGCCTACTGACTTGCAGGGGAACAAAACCCTGACAAAAGTTGATTAATTGGAAGATAAAAGGTACTACAGTGCATGGCCTCCCCCCTATCAGCCTATATGTCCCTGTTATTTGTCCCATGTCCGACACCTACCCCACCTAGTGCGGGTTCTCAGTAAGAAGTACGATAGTATCCAAATGGTCAATCCTTTGCCCCATTTTACTTGAACAAATAAGTAACAAAAAAAGATAAAATATCTTGTATATATTTTTTTAGAGCACCTATCTTGTATATTTTTATTAGCAATTATGACATGCAATAGAAACAATAATTACCCTCTGATTGTCCCAGAGGAAACGCATGAACTTTCCCCATTCAATATTCTGACGATCATCTTCAGGTTCAGGAAGCAGTGAAAATTTCAGGAAATCACACTGCTGGTACACCTTAGTTGGCACAAACCTAACAATTGACCAAACCGAGGGCACTTTAACTGGAATATCACAGACTTTGGTGCGGCATATGTTCTTAGAATCTTTTTGTAATAATACATAGTTCAAGCCACCACCTTGATTTTCATGTGGCGGCTCATTCAAATCAAGTGTTTCATCCGCCATCTCCTTCTCTTCACCCCCGGGAGGGATCGGAGGCGAGGCGGAGACGGAGGCGGCGGCCACGGCGGCGAGCGCGCAGCGGGTGAGGAGGCGGCGGCGGTGGGATTTTGGGCGCGGCGAAGCGGGGCGTGTTTTGTGCTGGCGATACGAAGGAGCATTGAAGGCGGACGCCGCTTCCGCTCGCCTACTAGCCTTAGGGCTTATTCGGATCGGA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0353000.1 | 6 | 24986925 | T | C |
| Osa06LNT0353000.1 | 6 | 24987602 | T | C |
| Osa06LNT0353000.1 | 6 | 24987643 | T | A |
| Osa06LNT0353000.1 | 6 | 24988397 | A | T |
| Osa06LNT0353000.1 | 6 | 24989228 | G | A |
| Osa06LNT0353000.1 | 6 | 24989359 | A | C |
| Osa06LNT0353000.1 | 6 | 24989563 | C | T |
| Osa06LNT0353000.1 | 6 | 24989964 | A | G |
| Osa06LNT0353000.1 | 6 | 24990024 | T | A |
| Osa06LNT0353000.1 | 6 | 24990082 | C | G |
| Osa06LNT0353000.1 | 6 | 24990792 | A | T |
| Osa06LNT0353000.1 | 6 | 24991071 | A | T |
| Osa06LNT0353000.1 | 6 | 24991474 | A | C |
| Osa06LNT0353000.1 | 6 | 24992611 | A | C |
| Osa06LNT0353000.1 | 6 | 24993215 | G | A |
| Osa06LNT0353000.1 | 6 | 24993579 | T | C |
| Osa06LNT0353000.1 | 6 | 24993665 | A | G |
| Osa06LNT0353000.1 | 6 | 24994220 | A | G |
| Osa06LNT0353000.1 | 6 | 24994405 | A | C |
| Osa06LNT0353000.1 | 6 | 24994820 | T | G |
| Osa06LNT0353000.1 | 6 | 24994917 | G | A |
| Osa06LNT0353000.1 | 6 | 24995785 | G | T |
| Osa06LNT0353000.1 | 6 | 24996826 | G | T |
| Osa06LNT0353000.1 | 6 | 24996860 | T | G |
| Osa06LNT0353000.1 | 6 | 24997044 | T | A |
| Osa06LNT0353000.1 | 6 | 24997443 | A | G |
| Osa06LNT0353000.1 | 6 | 24996727 | C | T |
| Osa06LNT0353000.1 | 6 | 24994891 | A | C |
| Osa06LNT0353000.1 | 6 | 24996029 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0353000.1 | osa-miR5534b | Cleavage | 5.0 | 15.863 | 1 | 21 |
| Osa06LNT0353000.1 | osa-miR5805 | Cleavage | 4.5 | 7.804 | 1 | 24 |
| Osa06LNT0353000.1 | osa-miR5812 | Cleavage | 4.0 | 10.246 | 1 | 24 |
| Osa06LNT0353000.1 | osa-miR156a | Translation | 4.0 | 16.238 | 1 | 20 |
| Osa06LNT0353000.1 | osa-miR156b-5p | Translation | 4.0 | 16.238 | 1 | 20 |
| Osa06LNT0353000.1 | osa-miR156c-5p | Translation | 4.0 | 16.238 | 1 | 20 |
| Osa06LNT0353000.1 | osa-miR156d | Translation | 4.0 | 16.238 | 1 | 20 |
| Osa06LNT0353000.1 | osa-miR156e | Translation | 4.0 | 16.238 | 1 | 20 |
| Osa06LNT0353000.1 | osa-miR156f-5p | Translation | 4.0 | 16.238 | 1 | 20 |
| Osa06LNT0353000.1 | osa-miR156g-5p | Translation | 4.0 | 16.238 | 1 | 20 |
| Osa06LNT0353000.1 | osa-miR156h-5p | Translation | 4.0 | 16.238 | 1 | 20 |
| Osa06LNT0353000.1 | osa-miR156i | Translation | 4.0 | 16.238 | 1 | 20 |
| Osa06LNT0353000.1 | osa-miR156j-5p | Translation | 4.0 | 16.238 | 1 | 20 |
| Osa06LNT0353000.1 | osa-miR397b | Cleavage | 5.0 | 11.641 | 1 | 21 |
| Osa06LNT0353000.1 | osa-miR399e | Translation | 3.5 | 16.288 | 1 | 21 |
| Osa06LNT0353000.1 | osa-miR399f | Translation | 3.5 | 16.288 | 1 | 21 |
| Osa06LNT0353000.1 | osa-miR399g | Translation | 3.5 | 16.288 | 1 | 21 |
| Osa06LNT0353000.1 | osa-miR160f-3p | Translation | 5.0 | 14.947 | 1 | 21 |
| Osa06LNT0353000.1 | osa-miR166k-5p | Cleavage | 4.0 | 16.268 | 1 | 21 |
| Osa06LNT0353000.1 | osa-miR528-5p | Translation | 3.5 | 17.137 | 1 | 21 |
| Osa06LNT0353000.1 | osa-miR528-5p | Translation | 5.0 | 12.717 | 1 | 21 |
| Osa06LNT0353000.1 | osa-miR1853-3p | Cleavage | 5.0 | 21.333 | 1 | 22 |
| Osa06LNT0353000.1 | osa-miR1854-3p | Cleavage | 5.0 | 12.298 | 1 | 22 |
| Osa06LNT0353000.1 | osa-miR2874 | Translation | 5.0 | 13.027 | 1 | 24 |
| Osa06LNT0353000.1 | osa-miR2931 | Cleavage | 5.0 | 11.073 | 1 | 20 |
| Osa06LNT0353000.1 | osa-miR395x | Translation | 4.0 | 19.082 | 1 | 21 |
| Osa06LNT0353000.1 | osa-miR395x | Translation | 4.0 | 11.616 | 1 | 21 |
| Osa06LNT0353000.1 | osa-miR5147 | Cleavage | 4.5 | 15.364 | 1 | 21 |
| Osa06LNT0353000.1 | osa-miR5147 | Translation | 4.5 | 16.494 | 1 | 21 |
| Osa06LNT0353000.1 | osa-miR5159 | Cleavage | 4.5 | 12.811 | 1 | 24 |
| Osa06LNT0353000.1 | osa-miR5490 | Translation | 4.0 | 11.087 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0353000.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0353000.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0353000.1 | 6 | qDLR6-2 | Resistance or Tolerance | Other soil stress tolerance | RM1340 | RM5957 |
| Osa06LNT0353000.1 | 6 | ostd(t) | Physiological trait | Sterility | nan | nan |
| Osa06LNT0353000.1 | 6 | tgw6.1 | Physiological trait | Source activity | RG264 | RM3 |
| Osa06LNT0353000.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Osa06LNT0353000.1 | 6 | nan | Morphological trait | Root | RM4447 | RM5509 |
| Osa06LNT0353000.1 | 6 | prt6.1 | Resistance or Tolerance | Drought tolerance | R2549 | RG716 |
| Osa06LNT0353000.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0353000.1 | 6 | gw6 | Morphological trait | Panicle/flower | RG424 | R2549 |
| Osa06LNT0353000.1 | 6 | qGL-6 | Morphological trait | Seed | R674 | R2549 |
| Osa06LNT0353000.1 | 6 | RPLD4 | Physiological trait | Eating quality | RG424 | RG172 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)