© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0353100.1
TAAAACAGTTCATGCGATACGCGATCTGCTTCAGTCAGCAGATCGCTCCGATAATTACCATTATTTGTCAATGATTTCTTTCAGTAATCTGACAATTCTACAATGATACAGATCACATTGCCAACGCTCTTAACTTACACATCTAAACTAATGCCCTGGTGTGCCTTGTGTGATCTAGGCTCTTACATGTTACATCTACTGCTACAAAACTGGAAGGTTAATGGTACATGGTCGCGCCCCAAAGAGAGTTAGTCCACAGGAGAAGCAGATTACGAACAGCACACGGTGCGCATTCTTCCTTGAATCTCCAGGTTCCCTCGGGAAGCAGTGAAGCACACGCAGCCACGCTGGCTACAAACTCGGGAAGCACAGGCATGCCAATCAATGTTGGTTCCTCCCCTCTGTTCTTCGGAGTGAGCTTAAATCTCATCATCATCATCATCATCATCCATAAGTTCATCTGGAAGGTGTACTTTCTCCATTGCAGACTTGATTATAGCAACGTCAGCAGCAGGAGGTTTCAAATCCAGGGCAATGCCAAAGCAAAATACAGCCTTGTCAAGAATGTTAAGTTGCTTGTAAATCTTTCCCATCAGTGCATACATACTACTTTCATGAGGTGCAATTTCCTTTAGCCGTTCCAACTCATCCAGAGCATCAGGGTATTTTTGTAGGCCTAGAAGGATTAAAGCCTTTTGATACTTGGGGAGTGGATTCTTCTTATCAGCAAATATAGCGTTCTCCATCATTTCCAAGGCTTCCTCATTCCTCTTTAAAGCATGCAAGGCCATCCCAAGATAGCACATAAGAACAGAAGAGCAAGGATTTATCTGGAATGCCCTTCTGAAATGATGCTCAGCAAACTCAAACTTTTCCTGGCGAAGGTACACCACTCCAAGGCCATACCAGGCATTGTAGTGTCTTTCATCTACCTGAAGTGCAGAGCGGTATAGTTTTATACTGTTCTCATAATCCTCCAATGCAGAATACTCGTGACCGCATAGCGTGTGAGCGTATGCAACTCTTGAGTCAAGCTGTACAGCACGTTGAAAATTCTTCAAGGCAGTCTCATGATCTTTCCTCAAGGCAAAGCAATTTCCCACAGCACACCATGCTTGGGGAGATAGTCGATCAATAGAAACAAGATCTTGAGCAAGGTAACTTAGCCGCATTTCCTCATTCAAATGATAAAGAACAGTGGAGTAAATGTCCATTCCCTCCAACGTGCATGGTGATAGTCGATGCGCTAACTCAAAAAAATGATCGGCTTCTAAATAATTGACGAGTTCAAAATATGTCTTCCCAACCTGGCAAAGAACCCATCCAGTATTAAATTGTGCCTCTGGGAGCTTTCTATATACTTCCAATGCTTCCTGACACTTAAACAAGCAAGAAAGCCTATACCCTTCCCCTAGTGTCCGCAAGAGTGCCATTAGCTCCCTGATACCAATAGCTAATTTGGAGTCCTGTGACAGAACTCGTTCAGATTTCTCTTGCTCGGGATATCTTCCATCAACTATACTTGTAGAAGACGAAGTTGAAGTTACATTATCTGTCCACATTTCATCAACAACGTGGTACCTGTTTCCTGACGAGTGATCTGTTCCATTCCCTCCAAATTGAGAGATATTTGAGTTTGAGTTTATTGTTGTATCTCTAGAAAGTCTTGCACTTCTTCGAGGAACTGAATCACTACTCTGATTAAACAGCCTTCCAGAAACCTTCTTTAGGCCTGCTTCATCGATGTATTTTCTTCGGAGTGTCAGGTTCGGAGCATTAACCTTTGGTTTGGAAGGAGCATTGCCACCTGCTGTATTCTGATAAGCATGCATATTCCGAAAGAGTGGTGGTGGAGCAATGCCAGAAGCCTGCGTTGAAGTTGGCGATGGAGTGTCAAACTGTGATAAATTAGATGGTGCACCGTTCTGCATATGCAATGCAGTTGACTTTACATGAGGATAACCAGATACTTCTGCAGTGGTGTTAGCATGCAGCTGTTTAATTTGCTTAGGACTATCACCAAAACTTGCTGACACATTGGAAGATAGAAACCGATTTTCATTAACAAAGTTTGACTTTTCCACATTTGATGTGGATGTGAGTTCCTGCTGAAGACGTAGAGCTGTTGCTTCACTGAAACATTCATTTGCATCTTCAGCAACACCTAGTATGCACAATTCCTCGTATGCTGCCCATAGAAGAGGATCAAGAGTCAGAGCTTGTACAAATTGCTCAGCTGCAGCTTCCACTCTGCCAGTGTACCTGTAAATTACTCCAAGAAGGTAGTGCCCTGTTGCACCACTTGGAACCTCAATATTTGGTTCATTGACAGGACACAAGGCTTCTTCAGCTTCCCGTAAGAGGTTCATTCGGAAGCATGACATAGCAAACAAGTACCGGGACTCTGGCAGCTTCTTTCCTTTCAAGATGTGGTATGCAGCATATGGCTGGTTGTTGTGAAGGTAGCAAGTCGCTAGCAACTGGACATTTGTCTCGGCGGGGAACTGGGCGCAGAGGCGCTCGCAGAGGAAGACGGCGTTGCGGTGCATGAAGAGGCGGAGGCTGCCGTGGACGCGGTCCACCATTAGGGTTTCCATCGCCGCCAACGCTCCAGCGGCGGCGGCGGCGGCGATGCGTGTCGGGCTACTGCGGCGGCGCGCGGCGGCCGGCGGCGAGGGTGGGCACCGTTTGAATCGAGGAGGAGGAGAGGGGAGGGGTTGGGTTAGATTCGAGGGGGATTTTTTTTTTTTTGGTGTTGTGTTGGGATTTTTGATTTTTTTGGATTGGGGATTCGGACGAACGGATCGGAGTTTGGGCTTGCGCCTGTGCGCGTTGGTGTGAGTGAGTGTGGCGTTTGAAATGGTGGGCTGACTGGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0353100.1 | 6 | 25031735 | A | T |
| Osa06LNT0353100.1 | 6 | 25025742 | A | G |
| Osa06LNT0353100.1 | 6 | 25026863 | C | T |
| Osa06LNT0353100.1 | 6 | 25027014 | G | A |
| Osa06LNT0353100.1 | 6 | 25027116 | C | T |
| Osa06LNT0353100.1 | 6 | 25027540 | A | G |
| Osa06LNT0353100.1 | 6 | 25027580 | A | G |
| Osa06LNT0353100.1 | 6 | 25027674 | T | C |
| Osa06LNT0353100.1 | 6 | 25027676 | T | C |
| Osa06LNT0353100.1 | 6 | 25027903 | T | C |
| Osa06LNT0353100.1 | 6 | 25028733 | G | A |
| Osa06LNT0353100.1 | 6 | 25031007 | A | G |
| Osa06LNT0353100.1 | 6 | 25031865 | T | C |
| Osa06LNT0353100.1 | 6 | 25032929 | T | C |
| Osa06LNT0353100.1 | 6 | 25033542 | A | T |
| Osa06LNT0353100.1 | 6 | 25033904 | T | C |
| Osa06LNT0353100.1 | 6 | 25034440 | C | T |
| Osa06LNT0353100.1 | 6 | 25031375 | C | T |
| Osa06LNT0353100.1 | 6 | 25026948 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0353100.1 | osa-miR5542 | Translation | 4.0 | 18.767 | 1 | 21 |
| Osa06LNT0353100.1 | osa-miR5828 | Cleavage | 5.0 | 19.311 | 1 | 21 |
| Osa06LNT0353100.1 | osa-miR6250 | Cleavage | 5.0 | 11.85 | 1 | 22 |
| Osa06LNT0353100.1 | osa-miR166c-5p | Translation | 5.0 | 16.286 | 1 | 20 |
| Osa06LNT0353100.1 | osa-miR166i-5p | Cleavage | 5.0 | 20.693 | 1 | 21 |
| Osa06LNT0353100.1 | osa-miR1440a | Cleavage | 5.0 | 22.285 | 1 | 20 |
| Osa06LNT0353100.1 | osa-miR2122 | Cleavage | 5.0 | 18.529 | 1 | 22 |
| Osa06LNT0353100.1 | osa-miR2874 | Cleavage | 4.0 | 20.657 | 1 | 24 |
| Osa06LNT0353100.1 | osa-miR5505 | Cleavage | 4.5 | 16.637 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0353100.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0353100.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0353100.1 | 6 | qDLR6-2 | Resistance or Tolerance | Other soil stress tolerance | RM1340 | RM5957 |
| Osa06LNT0353100.1 | 6 | ostd(t) | Physiological trait | Sterility | nan | nan |
| Osa06LNT0353100.1 | 6 | tgw6.1 | Physiological trait | Source activity | RG264 | RM3 |
| Osa06LNT0353100.1 | 6 | gw6 | Morphological trait | Panicle/flower | RG424 | R2549 |
| Osa06LNT0353100.1 | 6 | nan | Morphological trait | Root | RM4447 | RM5509 |
| Osa06LNT0353100.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Osa06LNT0353100.1 | 6 | prt6.1 | Resistance or Tolerance | Drought tolerance | R2549 | RG716 |
| Osa06LNT0353100.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0353100.1 | 6 | qGL-6 | Morphological trait | Seed | R674 | R2549 |
| Osa06LNT0353100.1 | 6 | RPLD4 | Physiological trait | Eating quality | RG424 | RG172 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)