© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0353300.1
AAATATACATTTTCGAGAAAAATAATACTAGAATGTTACAACTTGTGGGCTTGCATTATTGCGTTATAAGACCCCTACGCTATAGCCGTCGCACAGCAATTTATCTGAGATTCTACTGGCCCCTACCTTTTCAATGACCTGATGTATCCTAGTTACAACAACGATGAACCTTTTTAGTTCTTTACTATACATGTGAAGCTGCCTGACCTTTCAGGACCTCGCCATCAATCAACGCAATATCACAAAAAGAATTGTGGCAGCCAAGCCTTCGGTTGCAATGCACAAGAAATAGCGATTTGATCCGATCTCAACGCACGAGGAGTCTAAAACAGTATGTGCCAACGCACAACTGTCAACATTTGTCTCGAACAGGATCATACAACTCCTAGCTTGAGGAGCTAGCTCGATCCCTTTACAAAAGTTCAGTCATCGGAAGTTGCAGAAATCATGTGGTTGGTCTGGTCATTGTTGATAGACCACGGCCTCCAATAGGACCCATGCCATGCAGGCCCATATCGAGCTCATCATCAGTCGTCTCTTCGCCAGATTCAGCACCAGCAATCCCAATGCAAGCAAACAAAGAAGATTCATCAACTTTTAGGTGCTCATATGCAAGATACAAGTCCTCAATCGTGGCACTTTCATACAACATCGTCAATTCCTTGATGCAGGATATTTCCTTTCTAGGCACAGATGAAGACTGCAGATGGGCTAGTAAACCAAGCCAATAGGCATTTGTCTTTGTCTCAGCCTCATGTTTCATCAATAACGTCCTCTTTGCCCGGTCCAGCTCCCTTTCAACAATTTTGTTACTATGTAATCCTCTGAGAACACCTTTGCATGCATCAACAGCTTTATGAACCTTGCTCGGGGTTGATGTTACTGCAATCACATACCAACCAAGGTCCAATTTGTCAAAAAGGTTTAGTTCAAAAGAAACATCGTAGGTTAATCCCATGGAATCTCGAACTGTTGTGAATAGCCTAGAATTAATAATTTCAGCCAACAAACTCAAAGTGATGCCAAAGAACAGAGAATGGCTGCGAACGTCATTATGTTTCCTCTCCGTAAGATCTGTGTTTGCTGATTCAGAAACTTGAGCATCTCCACTAGAACTCCGGATGACATTGAATAGATCATTCCCTTCAGTTGCAAACCCCCAGCGATTAGGTGCAGGGCCAGCAATGTAGGCACAAGCTCTCTCATCAGTATCCTTTATGTATACTTGCTGAAAATGCAAGTCCGAAGGAAACGGCAGGAAGGAAATCTTCTCAATATGCTCCTGTGTTTTTGAAGATTTTGGAGCACTCACAGTCCCAAGATAGTCAAGAACACAAGATTCGACCTCTTCTTCAGTGAAATCACCAACAATACTGACCTCCATGTTGTCACCAACAAACTGGTTCATAACAGCATCTTTGACTGATTGGAGAGTCAATTTCTGCAATGAATGTGGTGATGGCTCTACAAACCTTTCATCATGGTTCAACATGGCTAACATAAGCTTGTGGGCTGTAGAGCGCTCCAAACTTTTGGGAATGGAGCGATAGTAAGACAGGTATAGCTGAGTTGCTCTATCAAATGCATCTTCTAGCCACACATTATGCTCAAGGACCATATGGAGGAGTTGGAAAGCAGCGCGCATGCCATTGTCTCTTAAAGCAAATCTGAACTCCATAAAAATGAACTCCTCATTGGATTCTAATGAGCAGTTTATGAGATTATTCACACAGAAAAGTTCAACCTGTTCCCTTGAAAAGTTGCCAACACAGCCACCTTCACTCAAAGTACGAACACCAACAATAACAGATCCCTTAGATTCAGAATCTTCTGTTGCCCTCCCACCACCTACTATCAGTCGCATAACACCAACCCTTGCCTCATTTTGTGTGATCTTATAATTGATGGAAATTCCATTAGAAAGGCGGCGCTGTGCTATACCAGTTTCATCGTCAAATATTTTCACAACATTCTCCTCTTTACTCAGAGAAGCAAATGATGGTTTGCGTTGCAATTTCAAGTCCTCAAGCTCAGACCGAGTAATCAGTTCTTTTGGCACCTCGAGCTCAGGCTCTGGGTAAATAGGTTCCTCAAGACCCGCCTTGATGGAATCAGTTATTTCTTCCGGATGTATCTCAAAATCAGTTTCACCTACTCCATCCATGTGGACCTTTTTGGGTACACAGGCCACAATAGCAGCAGGAAGCGGTGCATCAGGCTTTCCATAATCTGAAATAAATTCCAGAACTTCTGCACCAACAGTGTTGACCTCCTCAAGGGTGACGGTTTCAGCAACAGCAAGCAAACTTTCATGCCCCTGCAATTGATCCATAACAGTATGGCGAAGTGCATCACTCTCCATAATGAAGTCCAAGTTGTCAACTGAGGGAACACTATCAATCATCATAGCCAGTTGCTCGCTATCTTTTATCAGTGCATCCATGTAGCGGGTCATTTCCCCCATTGTGACACCAAACTCTTTGAGTCTCCTAACCTCATGAACGGCAACTTTGATGGCACTCCTCCAATTCTGGGGTTCAGCTGTTACTGTAAGAGTAGTGACAGTGCAACCTTCCCTTCCAGAGTCACTATGATCCAGCTCGACGGATGTAAAAGGAGGATTTGAGCTCTTATATCTTGTATTGATTCGAAAATGCAGAGCAGATAAAAATATCCGCTTCATCAGGACACTTCGCAGGTCTTTATATGTCTGAACTTGGTTAACAGGTATCTTACAGAACATGTTGATTGAGAAACTCTGGATCAATTCATGTTGAAAAATTGCTGGAGGCTTGGCATCCTGGGCAACTCCAGGAAGAGACCACTTATGTTCTACAGGTGGCCTAATTGCCTGTCTTTCCCTTTTCACAGGCTTTATTTTATCCGCAGCAGGTGATCTTTCACCAGTTAGGCTTGCAGCCAAGCCACCAGGTAGCTTTGGTGCAAAAAGGCTTGCCATAGCACCAAATGGACTTGCAGTTGACATAGGGGCTGCTTCACCTTCTGGAAGTGTATGTTCAAACACAGCCTCTATTTCTCGTATTGCTCTGGGAATATCATCGATCTCTCCTACCAGATATAAAGTAGCATTAGCAGGGTAATACCAACGCTCATGAAATCTGCGGATCTTATCAGGATCCCATTTATGTATCTGCTCTTCAAGTCCAATAGGGAATCTTTCGCTCAGTTTGTTTTCTGAGTGCAAATG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0353300.1 | 6 | 25200546 | A | T |
| Osa06LNT0353300.1 | 6 | 25201684 | C | T |
| Osa06LNT0353300.1 | 6 | 25202009 | A | G |
| Osa06LNT0353300.1 | 6 | 25202780 | C | T |
| Osa06LNT0353300.1 | 6 | 25203269 | G | A |
| Osa06LNT0353300.1 | 6 | 25203744 | A | G |
| Osa06LNT0353300.1 | 6 | 25204016 | T | A |
| Osa06LNT0353300.1 | 6 | 25204582 | T | C |
| Osa06LNT0353300.1 | 6 | 25205034 | T | C |
| Osa06LNT0353300.1 | 6 | 25205191 | A | G |
| Osa06LNT0353300.1 | 6 | 25205646 | C | T |
| Osa06LNT0353300.1 | 6 | 25206326 | C | T |
| Osa06LNT0353300.1 | 6 | 25206526 | A | T |
| Osa06LNT0353300.1 | 6 | 25206865 | T | G |
| Osa06LNT0353300.1 | 6 | 25200424 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0353300.1 | osa-miR6248 | Cleavage | 4.0 | 13.764 | 1 | 21 |
| Osa06LNT0353300.1 | osa-miR6253 | Cleavage | 4.5 | 9.023 | 1 | 22 |
| Osa06LNT0353300.1 | osa-miR6255 | Cleavage | 4.0 | 17.765 | 1 | 22 |
| Osa06LNT0353300.1 | osa-miR7692-5p | Translation | 5.0 | 16.374 | 1 | 24 |
| Osa06LNT0353300.1 | osa-miR156a | Translation | 3.5 | 8.899 | 1 | 20 |
| Osa06LNT0353300.1 | osa-miR156b-5p | Translation | 3.5 | 8.899 | 1 | 20 |
| Osa06LNT0353300.1 | osa-miR156c-5p | Translation | 3.5 | 8.899 | 1 | 20 |
| Osa06LNT0353300.1 | osa-miR156d | Translation | 3.5 | 8.899 | 1 | 20 |
| Osa06LNT0353300.1 | osa-miR156e | Translation | 3.5 | 8.899 | 1 | 20 |
| Osa06LNT0353300.1 | osa-miR156f-5p | Translation | 3.5 | 8.899 | 1 | 20 |
| Osa06LNT0353300.1 | osa-miR156g-5p | Translation | 3.5 | 8.899 | 1 | 20 |
| Osa06LNT0353300.1 | osa-miR156h-5p | Translation | 3.5 | 8.899 | 1 | 20 |
| Osa06LNT0353300.1 | osa-miR156i | Translation | 3.5 | 8.899 | 1 | 20 |
| Osa06LNT0353300.1 | osa-miR156j-5p | Translation | 3.5 | 8.899 | 1 | 20 |
| Osa06LNT0353300.1 | osa-miR156l-5p | Translation | 4.5 | 8.899 | 1 | 21 |
| Osa06LNT0353300.1 | osa-miR1428a-3p | Cleavage | 4.5 | 20.87 | 1 | 21 |
| Osa06LNT0353300.1 | osa-miR2093-3p | Translation | 4.5 | 13.964 | 1 | 20 |
| Osa06LNT0353300.1 | osa-miR2095-3p | Translation | 5.0 | 16.485 | 1 | 20 |
| Osa06LNT0353300.1 | osa-miR2097-5p | Translation | 5.0 | 7.604 | 1 | 22 |
| Osa06LNT0353300.1 | osa-miR5519 | Translation | 4.5 | 15.251 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0353300.1 | 6 | qGL-6 | Morphological trait | Seed | R674 | R2549 |
| Osa06LNT0353300.1 | 6 | RPLD4 | Physiological trait | Eating quality | RG424 | RG172 |
| Osa06LNT0353300.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0353300.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0353300.1 | 6 | qDLR6-2 | Resistance or Tolerance | Other soil stress tolerance | RM1340 | RM5957 |
| Osa06LNT0353300.1 | 6 | ostd(t) | Physiological trait | Sterility | nan | nan |
| Osa06LNT0353300.1 | 6 | tgw6.1 | Physiological trait | Source activity | RG264 | RM3 |
| Osa06LNT0353300.1 | 6 | prt6.1 | Resistance or Tolerance | Drought tolerance | R2549 | RG716 |
| Osa06LNT0353300.1 | 6 | nan | Morphological trait | Root | RM4447 | RM5509 |
| Osa06LNT0353300.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0353300.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Osa06LNT0353300.1 | 6 | gw6 | Morphological trait | Panicle/flower | RG424 | R2549 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)