© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0353500.1
GCACCATTTAACCGTTTGAAAAGCGTGTTAACAGAAAGCGACGAGTAGCCAAGCTAGTACTACACAAGTGTACAACATTATGTAAATAAATTGTGAAAAATTATAGACAACAGATGTTTGTACGATTGTCCTCGCCACTAGAAAGTTATAATCCACCGACAAAATTCCCAGATTGTATTGGGCATTTGGGCGCATACCCTGTGCTTGTACTGTGTCGCATGAATGTGGTGTGCGAAACAGCCCGCAACTGTTTGCACCAAAACATGTGAAACAGCATCAAGTTGACGATGAAATTGCCAACTTGCTATCTTCAGCATCGAAATCCAACACACACAAAGACGCAAGAGAAACAGTTCAGCTCTCCAAACCTTTTCGCGCAACGTGAGTTGTGAAGGCAAGAGCGGGCACGCAGCTGGTACAGCTTGAATCCGGAAGACCGAGCTGACTGTCTGAGATTAGTACATTCCAGGTACAGCAAGAATCCGCACACCAGGAGCAGGGGTTCTAGGGCCAATGCCCTCCAGCAGCAGCACCAAAGCTCAAGCTGGCATCCTGCCCATGCTTTACGAGTCACCTACCGTGATCACACCGTGCATCAAAGCCGAAGCCTCCCTTGGTGCTACCGACAACAGGGGTAGAACATGGTTACACGGGTACGCTCTTGTGTACCGAGGGCGTCTGATTCACCCCACACCACATGTAATTTTTAGTTTATTATCACCTGGGAGTCTGATGCATCAATATGGTTTAAGGTACATGTGGGGGTTACCAATGGCATACTTTAGATCAAAGGGAGGTGAAACCCAAGGTTCTGGCATTGGTCACCGGAAACCTTTCTAGTTGGCCACTAGACTTTGCCTCTTCTCCATCGTTCCATGCATCGACAGGGCGACGTAGGGCAGAATGCTGAATGCCCAAGATACTCAAAATCTTCTATCCCAAGCAATGGTAGATCCTTGGAGCACTTTTACAATATGTAGGATCTTTGGAAAGAACTTGCCAAAGTCCATGAGTTGCCTGCTATTGCCTCATGTGAACATGAGAACGCTGTTCTGTCCTTGTATGAAATTCTCTTGGTGGATAAGACCAGCTCTCCACCTTTGTCCTATGAGATCAAGAGAGGAGTGTTATTGCCACCAAGTTCTCAGCTTTAGAAGGCAATACATGTATGAACAGTAATATCACTTATTTGTAGCGATGCACACCTGTGCTTTTTAAACAAATCTGCACAAATCTTAGAACCATTATGATTAAATCATAATACTAGCGTTCTTTCAAAAAAAATACTGGCGCCTGTAAACATTGAATACACTATTTTGCAAATCTGTATAAAGTCCTTCATACTCGAGCTACAAGAACTTAAGGTATTTTATTAGAGTCATCTATCAGCACACCAAAATCAACTGACTGAAGGGAGATGTGTCCTAGATATAAATCCTTAACATGTTGAGTGCACAACCCAACCCGTCTACCATCCAAACTGCCATGAATTGATGATGAGAAACCTGTCCTAAATCCTGGAAACCGCTGTCTCTCTTTGACATGAAGAACATACATACTCAGCGATGCAGATTGGCATCCCATGACAAAACAGTCAAATTGCCGAGAAGGAACTCTAACTCTTGAGAGGGTGAGCACAAACAATCCACTACTAGAAATGCCATACATCAGAGCTTCATCAGTGCAAACCGACGAACTAGATTCTAAAGGTGCCATTATTGCCTCAAAGTCCTCGGCCATTGGAATACCATAATCATCAAGTTCAAATCGCTTTTCTGTTATTTTCTCATACATTCGGTACTTTGCCGATAATGTCCTGATGCAGGATTTCCTGACACATTCAACCAACATAAGCTTAAGTTCTTTAAAATTGTCAACCTCTGAGAACCATCTCATCCAACGTTGAATTATTCCTGCAAACCAACTTATGATTAGCTCATCGTCTTGCAAAACAAGGGCTGAAACGTGCTTAGGGAAACCTTCAAGATTAATTAGACCATAACGATTAAGGCACTTATGGATATAGCTAATAGGAGCATGGATCTTAATGACAGCACCATCAGTGCAGGTAATAGCTGATTCTTTATTCTTTAAGCTGGACAATAATGCTTCTGTGGCAGCAGTTTCTGATGAGATGTAATCTTTGGCTTGCTTCTGAAAGTTGTTGAACGCGTCTTTGAGGTCCTGCGGAAGTGATGGTTCAGCAATGTATTTTGACAGGAGTATGCTCTCATCAGCTTCGCGTTTAGCATTGATATCCTGCATCCATACCTTGAGTAAAGTTTTGAACCAATGATCTGTCTTCATACAGTCTTTCCTAAACTGTGCAATGTGATCCAACAAAGGCGTGCTAAGACCAAGTGACTTGATCTCAGACTCCTTTACTCTTCTCAAACCATATGCCAACCACTTCTTTCCTAACCTAAGATTCATAGCATCCCATATCTCTTGCTTCTGAGAAGCAAATAAATGAACCTTTTCCTTCAGCTTATGCACAGCTTTCAGTGCAGCACTTTCCTTTGTTGTAACTCTTACCATAGAGCCAGCAAACTGTAAGCCCCGGGAATTACTTCTGACCGGCATAAGATACAACCTGTCATCAACTTCCAAGAATAGTGTTTTTCTTAAGTAAGTAATCATTTCCGATTTTATATCTTCTGCAATATCTCTGGATCCAACAACTGCAACAAAGATCTCGTCCATGTATCTACAAGCATATAGTTTTGTTTTTAGTGGATAGTCTGTTTGATTGTCACTGTTTTCCTCCCTATCCTTCAAGCCTGAAATTTGACTTCGAAACCAGTGGCGCAAATTTGACTCCTGGTTGTCTGAAACATCTGCTGCCTCTGAACCAAGGCCTTCATGCCTCATGCAAATCCTGAACACCTCGTGGTCAAAACTGTCGAGGTATATGTTCATTAGGATTGGCGCAAGTACTCCTTCTTGAGGAAGCCCATGGCCTTTAGGAAATCCTCCAAATACCAAATTGATCACCTCTGCATCAAACATGTGTTGCATGAATGTAACTAACTGATTGTCATCGATCTTTTCCTGTATTAGACAGATAATCTTAGAGAGAACATTTCTATCTACTTCTTTATGCATGGGGATAGTAAAGCACCAATCTGGAATCCCAATTTCATTGGAAATGAACCTCAGAGCCGACTGATGCCCTCGGCCGCTCCGACAGCCATGTGATATCTTTGAGAAATGGGGTCTGTAAACAACCTCAAGCACCACCCTTACTGCTTCCTGAATAATTCTCAAGTTCAACCGTGGGAGAACAAGCCTCCCTCCATCTCGCCTCTTTGCAACCACCGCATAAACATTCGCTCTGACATCGAACTCACCAGTCCTGAGCAGCTCCGCCAATGTAGCAAAGCAAACATCATCCCTCACCGATGACATGTCAATATTTGAATTGAGCCGAACAATGTCATAAGCATCCTCCAAAGTATCAGTGCTAGCCACCACGTTAGCCATGAGATCATGAAACTTGCCGTTCAAATACTGCGCCTTGACCCTCTTCTTGATCCTGAGCTCAGCCAGCCTCTTCCGCTCCATCCGCAGCAGGGGCTTCCTCTGCCTCTGAGCGGCCACGGCCGACTCCTCGGTGAGAGAGGCCAGGCTCTTCGCAAGTGACACCGGTGGCTGCTGCGGCTCGGCGGCTCCCTCCACCGCATCCTCGACTCCATCGAGCAAGAAGTGCGCCTTGCACCGCCGGAAGCACGCCGCGTAGCCTCCTGACCCTTGGGGAGGCGGAAGACGGTGCCGCCTTGTGGGGAGCACCCGGAGGAGGCGGCCGCGTCCGGGCGCCAGGAAGGACATGGGATCGCGCAACCTTAATCTCTAGCCGGTCTAGCTGCGCATTGGGTCGAACAGGTGGCGTGCGCGGAATGCCGAGGAGAGCGCGGCGAGGGCCCCCGGCCTTCGCTTCGCGGCGGCGACGGCTAAGCCGAGCGGAGCTTGTGGCGCGCCCGCGCCGCGCGCTGTCGAGGCCTCTCCAAGGGCGACGAGGCGTCGCTCGCGCCGTCGCCGCGGCGGCGGCGGCGTCGGCTAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0353500.1 | 6 | 25711258 | T | C |
| Osa06LNT0353500.1 | 6 | 25711720 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0353500.1 | osa-miR5529 | Translation | 5.0 | 24.471 | 1 | 21 |
| Osa06LNT0353500.1 | osa-miR5806 | Translation | 5.0 | 12.381 | 1 | 21 |
| Osa06LNT0353500.1 | osa-miR5512b | Translation | 5.0 | 16.408 | 1 | 21 |
| Osa06LNT0353500.1 | osa-miR394 | Cleavage | 4.5 | 20.813 | 1 | 20 |
| Osa06LNT0353500.1 | osa-miR166l-5p | Cleavage | 4.5 | 13.901 | 1 | 21 |
| Osa06LNT0353500.1 | osa-miR167d-3p | Cleavage | 4.0 | 13.348 | 1 | 22 |
| Osa06LNT0353500.1 | osa-miR1876 | Cleavage | 4.5 | 11.854 | 1 | 24 |
| Osa06LNT0353500.1 | osa-miR1879 | Translation | 4.0 | 10.569 | 1 | 24 |
| Osa06LNT0353500.1 | osa-miR2878-5p | Translation | 4.5 | 13.018 | 1 | 24 |
| Osa06LNT0353500.1 | osa-miR2878-3p | Cleavage | 5.0 | 19.595 | 1 | 24 |
| Osa06LNT0353500.1 | osa-miR3980a-3p | Translation | 5.0 | 17.811 | 1 | 21 |
| Osa06LNT0353500.1 | osa-miR3980b-3p | Translation | 5.0 | 17.811 | 1 | 21 |
| Osa06LNT0353500.1 | osa-miR2873b | Translation | 4.5 | 14.756 | 1 | 21 |
| Osa06LNT0353500.1 | osa-miR2873b | Cleavage | 4.0 | 17.252 | 1 | 21 |
| Osa06LNT0353500.1 | osa-miR5150-3p | Translation | 4.5 | 16.338 | 1 | 24 |
| Osa06LNT0353500.1 | osa-miR5338 | Translation | 4.5 | 13.369 | 1 | 21 |
| Osa06LNT0353500.1 | osa-miR5490 | Translation | 4.0 | 18.878 | 1 | 21 |
| Osa06LNT0353500.1 | osa-miR5512a | Translation | 5.0 | 16.408 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0353500.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0353500.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0353500.1 | 6 | qREP-6 | Resistance or Tolerance | Other soil stress tolerance | nan | nan |
| Osa06LNT0353500.1 | 6 | tgw6.1 | Physiological trait | Source activity | RG264 | RM3 |
| Osa06LNT0353500.1 | 6 | gw6 | Morphological trait | Panicle/flower | RG424 | R2549 |
| Osa06LNT0353500.1 | 6 | nan | Morphological trait | Root | RM4447 | RM5509 |
| Osa06LNT0353500.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Osa06LNT0353500.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0353500.1 | 6 | prt6.1 | Resistance or Tolerance | Drought tolerance | R2549 | RG716 |
| Osa06LNT0353500.1 | 6 | qGL-6 | Morphological trait | Seed | R674 | R2549 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)