© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0353700.1
GACAGTAGCAGTGCACAAGTCCATAAATGTACATTTATCTACCTTCTTTTCTTATCTACTATAAATTAATTAACAACTACCAAAATACCAGCCACCTGAACACTATACATGCCATTCACAAAGTCCCAGTAGCGGCCCAAAATCCACATACTGTAGTATACAATCTGGACAGATACCACAGAGAGAACAGAGTGAAAAAACTGAACACTGAACAGCTCATGCCAAACTCAACAGGTGATCAGATCATTCTTTCTTTTCTTCTCTTCTCTTTTCATTTTGTGCAGGAACAAGTGATCTGATCCATAGCTTTGGAGATACTGGGATGTTGCCACAGTCCCAGCTTGCTTTCTCTGAAACTTTTGTAACCCTGCATAGCTGAGAGACTGAGAAGATTTTGGTCTCAGATGGCGTCGGCTGTGCCTCCCTCGCGGTCAGGGCCCCTGTATGAAAGCCCCACATCCTCTCCTGATTGACGCCTCACCATGCTTGCCCTCTGCACCAGGCGCACCAGTTGCTGGACAACCTCGGACATCGGTGGACGGAACTCCGGTTCGGGCTGGACACACAATGCAATTATGTCAGCGAAACGGGAGAGTGATTTTGCAGGGTACATCCCATCCATTGCTGGATCAACCATCTTGGCAAGCGCATCGATGTCATGAAGCTGTGGAGTAGCCCATGTGACAAGAGACTGTTCGGACCTCTCTCTAGAGCTGTCTAACGGTTTACGTGCTGTCAATAGTTCTAACATCACTACTCCAAAACTGTACACGTCACTTTTTACAGTATATATTCCTGACATGGCAAACTCTGGGGCGCTATATCCAAAAGATCCAAACACTTCAGTTGAAACCTCTCTCTCAGGATTTGGTGTCAGGGCAGCAAGCCCACAGTCAGACAGATGGGGACTGTATTCTTTATCAAGCAGGATATTCGCTGACTTTAAGTTTCTATGTACAACAGGGGGCAAGCACACCTCATGCAGGTATTCTAAAGCTCGCGCGGTGCCTAGTGCTATCCTCATGCGGTGGTTCCATGTAAGGATCTTGCTTGTATCATCGAAAAAATGCAATATATCATGCAGTGTCCCATTTCCAATGTGCTCATACACAAGAAGCCTTTGTCCATGTTCAACACAATAGCCTGCAAGCGGCACAATGTTTGGGTGCCTAAGTCGTGAAATGCTCGACACAACCTCAAGAAAGTTATCTTCTTCATACAAGGAAAGTGACGCACTGTCTATCTTCTTCACTGCAAGTACCTTTCCATTGGGGAAGTCGGCCTTGTAAACACGACCAAGTGAACCCTCACCTAGGAGCGAATCTTGGCAGAAGCTGTTTGTAGCAACTTGGAGAGAAGCAACTGTATATGGATTCGCTGTGACAGAGACCTTCATCTTCTTTGACATAGAGCTGTTTGTACTATATACCCTTTCAGGAGTCATTTTTCCCATAGGCGGGAGCACGGAACTTGAAACAGGTGCGTCTTGCTGGGTGTGATCCCATATTTCCCTGTTAGAAGCTCTATCTATGTTTACTGCAAAAGTGCTTGCGACATCTTTTGATTCACTGATCCCACCATCTTTACTTTTCCGGACATTGTGAAGGCACAGTACCAACGCGAAAAGTACACCACAAGCAGCAGCCATTGAGCCAATAACTATCCCTATAACCAGACCAGTTCGCAGACGTTGCTTCTTGTCACTACCTTGATCAATAGGAATCTCAGGGATATTTGGAGCAGTTGTTGGTCCTTGAGGAAAGTCTGGTTGACCCTGAGGTGGTGAAGTGATAGTAGATGGCGGAGATGAAGGTACATTGAGAAATGAGTTTCCTCCAAGTATCAAATGTGAAATTGAACTGAATTCTTGTGGTATTGAACCGCTGAAATTGTTATTTGCTATGTTTAGTGTAGTAAGGCTTAGGTTGCTGAGTACATTGACTGTGCCCGATAGTTGGTTATTTTGCAGATAAATGCCAGAAATATTTGACAGAGAGCGTAAAGAAATAGGCAAGTTGCCATTCAGGTTATTGAAAGATACATCTAGTTCAGAAAGTGCAGTGAGGTTTCCAAACATTTCACCAATTTCCTGAAATAGTAAGTTGTGGCTGAGATTGAGATAGTTGAGTGAAACCATGTTGGATATCGAGTATGGAAGGTTACCGGAAAAGTTATTTCCTGCCAAATTCAGATAGGCGAGATTTGGTGGCAGCTGATAAGGAATTGAATCATGCAAGTTGTTGCTACTCAAGTCCATTGTCTTCAATGCTAGCAGATTGGATAGTTGGTAGCCAAGAGTGCCATTCAGCCCCATACCAGAAAGCTTGATCGAGGTGACGGCGGAGCCAACGCAGGAGACGCCCATCCACGCGGCACCGCAAGGGTCGCCGCCGCCGGCCGACCAGCCGGTGAGCTGAGCCGGGCTATTCCAGGAGGAGTACAGATTCCCCAGCGCCGCGGCGTCGCCGCCGTCGGTGTCGGCTCCCGCCACCGCCGCGAGGGCGAGGAGGAGAACGCCGGCCAAAGCGGCGGCCGCCATTCTTGGCCTCTCTCCCTCCTTCCTACCTTCACCTTCTCCCCCACCTGAAAAAGAAAGAGAAGAATATCTCCCTCGCTATCTCCTTGCTTATAGTAGCAATCTTGGCATCACATGATCACCACGGATAGCTAATATATGCTCTCGATGGATGCTGATGCTGCTGCTGCTGCTGCCATGGTTGCTTGAGGAAGGAAATCCAGTGTGGTGTCGGCAAAGATTGAAATTCTTGATTTCTTCTTAGCTTCTCCCCACTCTCCCACTCTCTCTCTCTCTCTTGCTGCTGCTGCTAGTCCGCAGTGAGGTGGGGGTGTGGCAGTACAGCTGCAGTGAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0353700.1 | 6 | 25727800 | A | C |
| Osa06LNT0353700.1 | 6 | 25730346 | C | G |
| Osa06LNT0353700.1 | 6 | 25730372 | G | A |
| Osa06LNT0353700.1 | 6 | 25730803 | A | T |
| Osa06LNT0353700.1 | 6 | 25732842 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0353700.1 | osa-miR5802 | Cleavage | 4.5 | 19.866 | 1 | 24 |
| Osa06LNT0353700.1 | osa-miR5826 | Cleavage | 5.0 | 14.802 | 1 | 24 |
| Osa06LNT0353700.1 | osa-miR6247 | Translation | 4.5 | 16.954 | 1 | 21 |
| Osa06LNT0353700.1 | osa-miR395b | Cleavage | 5.0 | 15.907 | 1 | 21 |
| Osa06LNT0353700.1 | osa-miR395d | Cleavage | 5.0 | 15.907 | 1 | 21 |
| Osa06LNT0353700.1 | osa-miR395e | Cleavage | 5.0 | 15.907 | 1 | 21 |
| Osa06LNT0353700.1 | osa-miR395g | Cleavage | 5.0 | 15.907 | 1 | 21 |
| Osa06LNT0353700.1 | osa-miR395h | Cleavage | 5.0 | 15.907 | 1 | 21 |
| Osa06LNT0353700.1 | osa-miR395i | Cleavage | 5.0 | 15.907 | 1 | 21 |
| Osa06LNT0353700.1 | osa-miR395j | Cleavage | 5.0 | 15.907 | 1 | 21 |
| Osa06LNT0353700.1 | osa-miR395k | Cleavage | 5.0 | 15.907 | 1 | 21 |
| Osa06LNT0353700.1 | osa-miR395l | Cleavage | 5.0 | 15.907 | 1 | 21 |
| Osa06LNT0353700.1 | osa-miR395s | Cleavage | 5.0 | 15.907 | 1 | 21 |
| Osa06LNT0353700.1 | osa-miR395t | Cleavage | 4.5 | 15.907 | 1 | 21 |
| Osa06LNT0353700.1 | osa-miR395c | Cleavage | 4.5 | 15.907 | 1 | 21 |
| Osa06LNT0353700.1 | osa-miR172d-5p | Cleavage | 4.0 | 22.96 | 1 | 20 |
| Osa06LNT0353700.1 | osa-miR395m | Cleavage | 5.0 | 15.907 | 1 | 21 |
| Osa06LNT0353700.1 | osa-miR395n | Cleavage | 5.0 | 15.907 | 1 | 21 |
| Osa06LNT0353700.1 | osa-miR395p | Cleavage | 5.0 | 15.907 | 1 | 21 |
| Osa06LNT0353700.1 | osa-miR395q | Cleavage | 5.0 | 15.907 | 1 | 21 |
| Osa06LNT0353700.1 | osa-miR395w | Cleavage | 3.5 | 15.907 | 1 | 22 |
| Osa06LNT0353700.1 | osa-miR395r | Cleavage | 5.0 | 15.907 | 1 | 21 |
| Osa06LNT0353700.1 | osa-miR1858a | Translation | 4.0 | 24.464 | 1 | 21 |
| Osa06LNT0353700.1 | osa-miR1858b | Translation | 4.0 | 24.464 | 1 | 21 |
| Osa06LNT0353700.1 | osa-miR2869 | Cleavage | 4.0 | 20.434 | 1 | 21 |
| Osa06LNT0353700.1 | osa-miR2878-3p | Cleavage | 4.5 | 10.848 | 1 | 24 |
| Osa06LNT0353700.1 | osa-miR2878-3p | Translation | 4.5 | 16.826 | 1 | 24 |
| Osa06LNT0353700.1 | osa-miR395x | Cleavage | 4.0 | 15.907 | 1 | 21 |
| Osa06LNT0353700.1 | osa-miR395x | Cleavage | 5.0 | 8.759 | 1 | 21 |
| Osa06LNT0353700.1 | osa-miR395y | Cleavage | 5.0 | 15.907 | 1 | 21 |
| Osa06LNT0353700.1 | osa-miR2919 | Cleavage | 3.5 | 17.325 | 1 | 19 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0353700.1 | 6 | qGL-6 | Morphological trait | Seed | R674 | R2549 |
| Osa06LNT0353700.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0353700.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0353700.1 | 6 | qREP-6 | Resistance or Tolerance | Other soil stress tolerance | nan | nan |
| Osa06LNT0353700.1 | 6 | tgw6.1 | Physiological trait | Source activity | RG264 | RM3 |
| Osa06LNT0353700.1 | 6 | prt6.1 | Resistance or Tolerance | Drought tolerance | R2549 | RG716 |
| Osa06LNT0353700.1 | 6 | nan | Morphological trait | Root | RM4447 | RM5509 |
| Osa06LNT0353700.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Osa06LNT0353700.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0353700.1 | 6 | gw6 | Morphological trait | Panicle/flower | RG424 | R2549 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)